Os01g0337700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0337700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26.09 | 0.24 | 9.07 | -0.018 | 0.74 | 0.224 | -0.478 | 2.8 | 0.0348 | 21.9 | 29.49 | 4776 | -- | -- |
| 27.37 | 0.244 | 9.01 | 0.602 | 0.723 | 0.534 | -0.535 | -- | 0.0695 | 21.9 | 30 | 4673 | -- | -- |
| 26.91 | 0.242 | 9.07 | -0.0339 | 0.743 | 0.223 | -- | 2.9 | 0.0317 | 21.9 | 29.37 | 4944 | -- | -- |
| 27.82 | 0.246 | 9.02 | 0.572 | 0.722 | 0.564 | -- | -- | 0.0413 | 22.1 | 31.4 | 3160 | -- | -- |
| 58.96 | 0.358 | 9.06 | -0.116 | -- | 0.114 | -- | 3.35 | 0.0177 | -- | 29.4 | 4457 | -- | -- |
| 38.3 | 0.29 | 9 | 0.449 | 0.705 | -- | -0.56 | -- | 0.15 | 21.8 | -- | -- | -- | -- |
| 39.49 | 0.294 | 9 | 0.47 | 0.707 | -- | -- | -- | 0.15 | 21.8 | -- | -- | -- | -- |
| 57.76 | 0.354 | 8.99 | 0.651 | -- | 0.497 | -- | -- | 0.108 | -- | 31.1 | 5899 | -- | -- |
| 37.21 | 0.284 | 9.03 | -- | 0.731 | 0.487 | -- | -- | 0.00216 | 22 | 31.4 | 3161 | -- | -- |
| 69.35 | 0.389 | 8.98 | 0.478 | -- | -- | -- | -- | 0.15 | -- | -- | -- | -- | -- |
| 45.32 | 0.315 | 9.01 | -- | 0.708 | -- | -- | -- | 0.0981 | 21.9 | -- | -- | -- | -- |
| 67.32 | 0.382 | 9 | -- | -- | 0.408 | -- | -- | 0.0469 | -- | 31.1 | 5898 | -- | -- |
| 75.37 | 0.405 | 8.99 | -- | -- | -- | -- | -- | 0.0971 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 25.91 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 6 | 26.06 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 8 | 26.10 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 10 | 2 |
| 9 | 26.15 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 10 | 2 |
| 10 | 26.15 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 19 | 17 |
| 33 | 26.20 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 119 | 26.36 | temperature | 30.0 | 4320 | < th | dose independent | sin | 7 | NA |
| 121 | 26.36 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 19 | 2 |
| 156 | 26.43 | temperature | 30.0 | 4320 | > th | dose independent | sin | 7 | NA |
| 183 | 26.48 | radiation | 20.0 | 4320 | > th | dose dependent | rect. | 15 | 17 |
| 185 | 26.50 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 15 | 17 |
| 232 | 26.59 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 18 | 16 |
| 258 | 26.66 | temperature | 30.0 | 4320 | > th | dose dependent | rect. | 11 | 1 |
| 294 | 26.75 | radiation | 20.0 | 4320 | > th | dose independent | rect. | 15 | 17 |
| 426 | 26.83 | radiation | 30.0 | 4320 | > th | dose dependent | rect. | 14 | 19 |
| 501 | 26.89 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 509 | 26.90 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 551 | 26.92 | radiation | 30.0 | 4320 | > th | dose dependent | sin | 13 | NA |
| 569 | 26.94 | temperature | 30.0 | 4320 | > th | dose dependent | sin | 8 | NA |
| 570 | 26.94 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 586 | 26.97 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 589 | 26.97 | radiation | 20.0 | 4320 | > th | dose dependent | rect. | 15 | 1 |
| 596 | 26.98 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 604 | 26.99 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 5 |
| 611 | 27.00 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 16 | 17 |
| 626 | 27.01 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 16 | 18 |
| 636 | 27.02 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 16 | 5 |
| 638 | 27.02 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 16 | 8 |
| 639 | 27.02 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 16 | 14 |
| 641 | 27.02 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 1 | 20 |
| 648 | 27.03 | temperature | 30.0 | 4320 | < th | dose independent | no | NA | NA |
| 757 | 27.04 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 16 | 10 |
| 790 | 27.05 | temperature | 30.0 | 4320 | > th | dose independent | no | NA | NA |
| 894 | 27.07 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 3 |
| 950 | 27.10 | radiation | 30.0 | 4320 | < th | dose independent | sin | 12 | NA |
| 980 | 27.12 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 9 |
| 985 | 27.13 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 13 | 23 |