Os01g0337100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Terpenoid cylases/protein prenyltransferase alpha-alpha toroid domain containing protein.
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Os01g0337100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Terpenoid cylases/protein prenyltransferase alpha-alpha toroid domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 242.61 | 0.732 | 2.83 | 0.039 | 0.164 | 0.362 | -0.47 | 1.89 | -0.126 | 5.23 | 40.02 | 44 | -- | -- |
| 249.16 | 0.735 | 2.82 | 0.0731 | 0.19 | 0.386 | -0.751 | -- | -0.104 | 4.09 | 40.4 | 40 | -- | -- |
| 243.02 | 0.726 | 2.83 | 0.021 | 0.161 | 0.365 | -- | 1.88 | -0.138 | 4.52 | 40.02 | 43 | -- | -- |
| 250.43 | 0.737 | 2.82 | 0.0895 | 0.181 | 0.379 | -- | -- | -0.117 | 4.01 | 40.46 | 40 | -- | -- |
| 244.52 | 0.728 | 2.83 | 0.0426 | -- | 0.328 | -- | 1.96 | -0.12 | -- | 40.32 | 43 | -- | -- |
| 252.32 | 0.745 | 2.83 | 0.0843 | 0.136 | -- | -0.638 | -- | -0.12 | 4.73 | -- | -- | -- | -- |
| 253.21 | 0.745 | 2.82 | 0.0883 | 0.146 | -- | -- | -- | -0.117 | 6.2 | -- | -- | -- | -- |
| 252.08 | 0.739 | 2.83 | 0.0957 | -- | 0.306 | -- | -- | -0.111 | -- | 40.46 | 40 | -- | -- |
| 250.63 | 0.737 | 2.83 | -- | 0.182 | 0.379 | -- | -- | -0.124 | 3.86 | 40.46 | 40 | -- | -- |
| 254.31 | 0.745 | 2.83 | 0.0923 | -- | -- | -- | -- | -0.114 | -- | -- | -- | -- | -- |
| 253.41 | 0.745 | 2.82 | -- | 0.147 | -- | -- | -- | -0.127 | 6.17 | -- | -- | -- | -- |
| 252.31 | 0.74 | 2.83 | -- | -- | 0.304 | -- | -- | -0.121 | -- | 40.41 | 40 | -- | -- |
| 254.53 | 0.745 | 2.83 | -- | -- | -- | -- | -- | -0.124 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 227.77 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 1 | 1 |
| 8 | 227.77 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 1 | 1 |
| 23 | 231.51 | radiation | 30.0 | 90 | > th | dose independent | rect. | 8 | 2 |
| 26 | 232.14 | radiation | 40.0 | 30 | > th | dose independent | sin | 11 | NA |
| 86 | 232.72 | wind | 1.0 | 90 | < th | dose dependent | rect. | 8 | 2 |
| 87 | 232.85 | wind | 1.0 | 90 | < th | dose independent | rect. | 8 | 2 |
| 221 | 236.09 | temperature | 25.0 | 30 | > th | dose independent | rect. | 9 | 1 |
| 222 | 236.10 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 8 | 3 |
| 226 | 236.26 | radiation | 40.0 | 30 | < th | dose independent | sin | 10 | NA |
| 227 | 236.34 | temperature | 20.0 | 30 | < th | dose independent | rect. | 12 | 2 |
| 230 | 236.35 | humidity | 90.0 | 90 | < th | dose independent | rect. | 2 | 3 |
| 231 | 236.35 | temperature | 20.0 | 30 | < th | dose dependent | rect. | 12 | 2 |
| 238 | 236.40 | radiation | 1.0 | 10 | < th | dose independent | rect. | 13 | 1 |
| 265 | 236.40 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 13 | 1 |
| 292 | 236.42 | temperature | 30.0 | 90 | > th | dose dependent | rect. | 10 | 1 |
| 344 | 236.90 | radiation | 30.0 | 90 | > th | dose dependent | sin | 11 | NA |
| 374 | 237.45 | atmosphere | 1010.0 | 10 | > th | dose independent | rect. | 24 | 10 |
| 375 | 237.46 | radiation | 20.0 | 90 | > th | dose dependent | rect. | 16 | 19 |
| 442 | 237.73 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 9 | 18 |
| 464 | 237.81 | atmosphere | 1010.0 | 90 | > th | dose independent | rect. | 24 | 9 |
| 472 | 237.92 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 10 | 11 |
| 482 | 238.07 | atmosphere | 1010.0 | 90 | > th | dose independent | rect. | 8 | 1 |
| 483 | 238.07 | atmosphere | 1010.0 | 10 | > th | dose independent | rect. | 9 | 1 |
| 552 | 238.30 | wind | 3.0 | 10 | < th | dose independent | rect. | 9 | 1 |
| 553 | 238.30 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 2 | 1 |
| 563 | 238.39 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 2 | 5 |
| 567 | 238.40 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 3 | 1 |
| 585 | 238.43 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 11 | 21 |
| 603 | 238.71 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 8 | 3 |
| 604 | 238.72 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 22 | 4 |
| 642 | 238.90 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 11 | 21 |
| 643 | 238.91 | humidity | 50.0 | 270 | > th | dose independent | rect. | 21 | 13 |
| 649 | 238.96 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 10 | 19 |
| 660 | 239.02 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 2 | 3 |
| 668 | 239.17 | temperature | 10.0 | 270 | > th | dose independent | rect. | 10 | 11 |
| 669 | 239.17 | temperature | 10.0 | 270 | > th | dose independent | rect. | 21 | 13 |
| 670 | 239.17 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 21 | 13 |
| 671 | 239.19 | wind | 9.0 | 270 | < th | dose independent | rect. | 21 | 13 |
| 672 | 239.19 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 3 | 19 |
| 674 | 239.19 | wind | 5.0 | 90 | < th | dose dependent | rect. | 8 | 3 |
| 691 | 239.20 | wind | 9.0 | 270 | < th | dose independent | rect. | 10 | 11 |
| 721 | 239.31 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 21 | 13 |
| 723 | 239.31 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 23 | 2 |
| 725 | 239.31 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 21 | 13 |
| 731 | 239.37 | humidity | 90.0 | 90 | < th | dose independent | rect. | 2 | 6 |
| 743 | 239.49 | temperature | 30.0 | 10 | > th | dose dependent | rect. | 12 | 1 |
| 799 | 239.63 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 10 | 11 |
| 813 | 239.74 | humidity | 80.0 | 30 | < th | dose independent | rect. | 7 | 1 |
| 872 | 240.04 | wind | 5.0 | 10 | < th | dose dependent | rect. | 9 | 1 |
| 879 | 240.09 | radiation | 40.0 | 90 | < th | dose independent | rect. | 3 | 12 |
| 882 | 240.12 | humidity | 50.0 | 90 | > th | dose independent | rect. | 8 | 3 |
| 886 | 240.14 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 9 | 11 |
| 892 | 240.18 | temperature | 25.0 | 30 | < th | dose independent | rect. | 3 | 12 |
| 900 | 240.27 | wind | 1.0 | 270 | < th | dose dependent | rect. | 6 | 1 |
| 902 | 240.28 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 7 | 3 |
| 912 | 240.34 | wind | 9.0 | 90 | < th | dose independent | rect. | 11 | 21 |
| 915 | 240.38 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 12 | 20 |
| 927 | 240.45 | wind | 9.0 | 90 | < th | dose independent | rect. | 8 | 3 |
| 939 | 240.48 | temperature | 10.0 | 90 | > th | dose independent | rect. | 8 | 3 |
| 940 | 240.48 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 8 | 3 |
| 941 | 240.48 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 8 | 3 |
| 942 | 240.48 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 8 | 3 |
| 944 | 240.48 | temperature | 10.0 | 90 | > th | dose independent | rect. | 11 | 21 |
| 946 | 240.48 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 8 | 3 |
| 965 | 240.50 | wind | 9.0 | 720 | < th | dose independent | rect. | 2 | 20 |
| 974 | 240.54 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 3 | 5 |