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Os01g0332900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.7 (0.018) R2 : 0.327
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.644 (0.0465) R2dC : 0.284 R2C : 0.264
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.218 (0.0379) R2dN8 : 0.0632 R2N8 : 0.0431
σ : 0.34
deviance : 52.71
__
_____
C
peak time of C : 19.5
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
34.06 0.274 13.6 0.645 0.638 -0.425 0.0999 -0.535 0.344 19.5 89 1421 -- --
34.48 0.273 13.6 0.687 0.644 -0.44 0.129 -- 0.346 19.4 88.6 1444 -- --
33.96 0.271 13.6 0.65 0.642 -0.429 -- -0.52 0.34 19.5 88 1446 -- --
34.33 0.273 13.6 0.692 0.639 -0.444 -- -- 0.353 19.4 87.59 1452 -- --
55.49 0.347 13.6 0.625 -- -0.478 -- -0.358 0.339 -- 88 1403 -- --
37.63 0.288 13.6 0.758 0.651 -- 0.0788 -- 0.302 19.4 -- -- -- --
37.65 0.287 13.6 0.756 0.651 -- -- -- 0.302 19.4 -- -- -- --
55.71 0.348 13.6 0.678 -- -0.515 -- -- 0.348 -- 87.2 1404 -- --
46.36 0.317 13.6 -- 0.755 -0.64 -- -- 0.314 19.4 88 2037 -- --
60.2 0.363 13.6 0.745 -- -- -- -- 0.292 -- -- -- -- --
52.71 0.34 13.7 -- 0.644 -- -- -- 0.218 19.5 -- -- -- --
67.71 0.383 13.6 -- -- -0.639 -- -- 0.299 -- 87.06 1421 -- --
74.85 0.404 13.6 -- -- -- -- -- 0.209 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 29.45 temperature 15.0 270 > th dose independent rect. 18 8
4 30.22 humidity 50.0 270 > th dose dependent rect. 6 7
5 30.23 temperature 15.0 270 > th dose independent rect. 2 16
7 30.39 temperature 15.0 270 > th dose independent rect. 7 18
10 30.53 wind 9.0 270 < th dose independent rect. 7 18
11 30.54 precipitation 0.1 270 < th dose independent rect. 1 6
12 30.54 wind 9.0 270 < th dose independent rect. 6 20
13 30.54 precipitation 0.1 270 < th dose dependent rect. 1 6
15 30.57 precipitation 0.1 270 < th dose independent rect. 2 4
17 30.57 precipitation 0.1 270 < th dose independent rect. 2 16
18 30.57 temperature 15.0 270 > th dose independent rect. 6 20
19 30.57 precipitation 0.1 270 < th dose dependent rect. 2 4
20 30.57 precipitation 0.1 270 < th dose dependent rect. 2 16
22 30.63 temperature 10.0 270 > th dose independent rect. 6 8
23 30.63 atmosphere 995.0 270 > th dose independent rect. 6 8
24 30.63 atmosphere 1015.0 270 < th dose independent rect. 6 8
25 30.63 temperature 10.0 270 > th dose independent rect. 14 16
26 30.64 wind 5.0 270 < th dose independent rect. 2 4
27 30.65 wind 9.0 270 < th dose independent rect. 6 8
28 30.66 radiation 10.0 270 < th dose independent rect. 18 8
29 30.67 wind 5.0 270 < th dose independent rect. 1 6
31 30.67 humidity 50.0 270 > th dose independent rect. 18 8
36 30.67 atmosphere 1015.0 270 < th dose independent rect. 2 16
37 30.67 wind 9.0 270 < th dose dependent rect. 2 4
38 30.68 wind 9.0 270 < th dose independent rect. 18 8
39 30.68 wind 9.0 270 < th dose dependent rect. 1 6
41 30.69 radiation 40.0 270 < th dose dependent rect. 18 8
42 30.70 atmosphere 995.0 270 > th dose independent rect. 18 8
44 30.71 precipitation 0.1 270 < th dose independent rect. 14 16
46 30.71 precipitation 0.1 270 < th dose dependent rect. 14 16
58 30.76 temperature 10.0 270 > th dose independent rect. 1 6
60 30.76 temperature 30.0 270 < th dose independent rect. 1 6
61 30.76 humidity 50.0 270 > th dose independent rect. 1 6
63 30.76 atmosphere 995.0 270 > th dose independent rect. 1 6
64 30.76 atmosphere 1015.0 270 < th dose independent rect. 1 6
65 30.76 radiation 40.0 270 < th dose independent rect. 1 6
66 30.76 wind 1.0 270 > th dose independent rect. 6 7
70 30.77 precipitation 0.1 270 < th dose independent rect. 6 8
72 30.77 precipitation 0.1 270 < th dose dependent rect. 6 8
76 30.79 temperature 10.0 270 > th dose independent rect. 2 4
78 30.79 temperature 30.0 270 < th dose independent rect. 2 4
79 30.79 humidity 50.0 270 > th dose independent rect. 2 4
82 30.79 atmosphere 995.0 270 > th dose independent rect. 2 4
83 30.79 atmosphere 1015.0 270 < th dose independent rect. 2 4
84 30.79 radiation 20.0 270 < th dose independent rect. 2 4
93 30.80 temperature 10.0 270 > th dose dependent rect. 2 4
101 30.85 radiation 40.0 270 < th dose independent rect. 13 17
105 30.88 precipitation 0.1 270 < th dose independent rect. 18 8
106 30.88 precipitation 0.1 270 < th dose dependent rect. 18 8
107 30.89 precipitation 0.1 270 < th dose independent rect. 7 18
108 30.89 precipitation 0.1 270 < th dose dependent rect. 7 18
110 30.90 radiation 40.0 270 < th dose dependent rect. 2 4
127 30.93 humidity 50.0 270 > th dose independent rect. 6 7
130 30.95 wind 1.0 270 > th dose independent rect. 7 18
132 30.95 precipitation 0.1 270 < th dose independent rect. 6 20
133 30.95 precipitation 0.1 270 < th dose dependent rect. 6 20
134 30.96 atmosphere 995.0 270 > th dose independent rect. 7 18
136 30.97 temperature 10.0 270 > th dose dependent rect. 1 6
137 30.97 radiation 40.0 270 < th dose dependent rect. 1 6
143 31.01 wind 9.0 270 < th dose independent rect. 14 16
144 31.01 atmosphere 995.0 270 > th dose independent rect. 6 20
156 31.09 wind 9.0 270 < th dose independent rect. 2 16
162 31.11 wind 1.0 270 > th dose independent rect. 6 20
177 31.19 temperature 15.0 1440 > th dose independent rect. 9 7
187 31.22 humidity 50.0 270 > th dose independent rect. 14 16
200 31.24 atmosphere 1015.0 270 < th dose independent rect. 7 18
211 31.25 wind 9.0 270 < th dose independent rect. 5 22
223 31.28 wind 1.0 270 > th dose independent rect. 18 8
228 31.29 precipitation 0.1 270 < th dose independent rect. 3 2
231 31.29 precipitation 0.1 270 < th dose dependent rect. 3 2
238 31.30 temperature 15.0 270 > th dose independent rect. 20 15
239 31.30 radiation 1.0 30 < th dose dependent sin 12 NA
258 31.39 humidity 50.0 270 > th dose dependent rect. 2 4
287 31.46 temperature 15.0 10 > th dose independent rect. 9 17
304 31.50 radiation 1.0 270 < th dose dependent rect. 5 21
325 31.53 atmosphere 1015.0 270 < th dose independent rect. 18 8
440 31.63 atmosphere 995.0 270 > th dose independent rect. 2 16
442 31.63 atmosphere 995.0 270 > th dose independent rect. 13 17
446 31.65 temperature 30.0 270 < th dose independent rect. 6 7
448 31.65 radiation 1.0 270 < th dose independent rect. 5 21
450 31.66 radiation 1.0 30 > th dose independent sin 12 NA
454 31.66 temperature 30.0 270 < th dose independent rect. 19 7
472 31.67 radiation 1.0 30 < th dose independent sin 12 NA
479 31.67 temperature 15.0 30 > th dose independent rect. 7 21
498 31.71 humidity 50.0 270 > th dose independent rect. 2 16
502 31.72 temperature 10.0 270 > th dose dependent rect. 18 7
517 31.76 radiation 1.0 30 > th dose independent rect. 17 14
544 31.79 atmosphere 995.0 270 > th dose dependent rect. 2 4
555 31.81 temperature 10.0 270 > th dose independent rect. 11 9
556 31.81 atmosphere 1015.0 270 < th dose independent rect. 11 9
558 31.81 humidity 50.0 270 > th dose independent rect. 20 15
559 31.81 atmosphere 995.0 270 > th dose independent rect. 20 15
593 31.85 wind 9.0 270 < th dose independent rect. 20 15
624 31.86 humidity 50.0 270 > th dose dependent rect. 6 20
629 31.87 radiation 1.0 90 > th dose independent rect. 7 8
637 31.88 humidity 50.0 90 > th dose independent rect. 7 21
655 31.89 radiation 40.0 270 < th dose dependent rect. 14 16
694 31.92 humidity 50.0 270 > th dose dependent rect. 3 2
805 32.05 wind 1.0 90 > th dose independent rect. 21 17
818 32.06 temperature 10.0 10 > th dose dependent rect. 2 7
841 32.07 wind 9.0 270 < th dose dependent rect. 18 7
843 32.08 atmosphere 1005.0 270 > th dose independent rect. 2 4
846 32.08 wind 1.0 270 > th dose independent rect. 11 9
862 32.10 atmosphere 1015.0 270 < th dose independent rect. 13 17
872 32.12 temperature 10.0 10 > th dose independent rect. 8 7
874 32.12 atmosphere 995.0 10 > th dose independent rect. 8 7
875 32.12 atmosphere 1015.0 10 < th dose independent rect. 8 7
876 32.12 precipitation 0.1 10 < th dose independent rect. 8 7
878 32.12 temperature 10.0 10 > th dose independent rect. 15 17
883 32.12 precipitation 0.1 10 < th dose dependent rect. 8 7
901 32.14 precipitation 0.1 10 < th dose independent rect. 15 17
906 32.14 precipitation 0.1 10 < th dose dependent rect. 15 17
910 32.15 precipitation 0.1 10 < th dose independent rect. 2 7
919 32.15 precipitation 0.1 10 < th dose dependent rect. 2 7
967 32.18 atmosphere 1005.0 90 > th dose independent rect. 4 4
977 32.19 temperature 20.0 270 > th dose independent rect. 13 5