Os01g0332800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Serine carboxypeptidase II-like protein.
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Os01g0332800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Serine carboxypeptidase II-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 134.58 | 0.545 | 10.5 | -3.47 | 1.38 | -1.17 | -0.406 | -2.33 | -1.28 | 11.2 | 994.8 | 10 | -- | -- |
| 138.37 | 0.552 | 10.5 | -3.53 | 1.39 | -1.33 | -0.442 | -- | -1.25 | 11.2 | 993.2 | 8 | -- | -- |
| 135.22 | 0.546 | 10.5 | -3.49 | 1.38 | -1.17 | -- | -2.4 | -1.28 | 11.2 | 994.7 | 6 | -- | -- |
| 139.17 | 0.549 | 10.5 | -3.55 | 1.39 | -1.32 | -- | -- | -1.25 | 11.2 | 994.4 | 6 | -- | -- |
| 254.91 | 0.748 | 10.6 | -3.51 | -- | -1.1 | -- | -2.78 | -1.3 | -- | 987 | 5 | -- | -- |
| 157.06 | 0.588 | 10.6 | -3.46 | 1.38 | -- | -0.404 | -- | -1.43 | 11.4 | -- | -- | -- | -- |
| 157.76 | 0.588 | 10.6 | -3.48 | 1.38 | -- | -- | -- | -1.43 | 11.3 | -- | -- | -- | -- |
| 260.23 | 0.755 | 10.6 | -3.58 | -- | -1.28 | -- | -- | -1.27 | -- | 994.6 | 3 | -- | -- |
| 468.53 | 1.01 | 10.5 | -- | 1.43 | -0.766 | -- | -- | -0.907 | 11.4 | 1002 | 3 | -- | -- |
| 277.59 | 0.779 | 10.6 | -3.52 | -- | -- | -- | -- | -1.44 | -- | -- | -- | -- | -- |
| 477.12 | 1.02 | 10.5 | -- | 1.42 | -- | -- | -- | -1.04 | 11.5 | -- | -- | -- | -- |
| 596.57 | 1.14 | 10.5 | -- | -- | -0.699 | -- | -- | -0.932 | -- | 1000 | 2 | -- | -- |
| 603.76 | 1.15 | 10.5 | -- | -- | -- | -- | -- | -1.05 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 118.44 | temperature | 15 | 270 | > th | dose dependent | rect. | 21 | 18 |
| 8 | 121.06 | temperature | 10 | 270 | > th | dose dependent | rect. | 19 | 21 |
| 15 | 122.17 | temperature | 15 | 270 | > th | dose dependent | rect. | 5 | 10 |
| 22 | 122.98 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 10 |
| 33 | 123.83 | temperature | 30 | 270 | < th | dose dependent | rect. | 2 | 17 |
| 46 | 124.28 | temperature | 15 | 270 | > th | dose dependent | sin | 4 | NA |
| 62 | 125.30 | atmosphere | 1015 | 90 | < th | dose dependent | rect. | 21 | 20 |
| 65 | 125.39 | atmosphere | 995 | 10 | > th | dose dependent | rect. | 5 | 18 |
| 66 | 125.44 | temperature | 15 | 10 | > th | dose dependent | rect. | 23 | 19 |
| 89 | 126.03 | atmosphere | 995 | 270 | > th | dose dependent | rect. | 2 | 19 |
| 96 | 126.18 | temperature | 30 | 270 | < th | dose dependent | sin | 4 | NA |
| 100 | 126.28 | atmosphere | 995 | 270 | > th | dose dependent | rect. | 15 | 6 |
| 121 | 126.68 | atmosphere | 1015 | 10 | < th | dose dependent | rect. | 21 | 21 |
| 124 | 126.71 | atmosphere | 1015 | 10 | < th | dose dependent | rect. | 23 | 19 |
| 175 | 127.49 | atmosphere | 1015 | 10 | < th | dose dependent | rect. | 23 | 17 |
| 183 | 127.73 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 16 |
| 225 | 128.16 | atmosphere | 1005 | 270 | > th | dose independent | rect. | 15 | 6 |
| 261 | 128.73 | atmosphere | 995 | 90 | > th | dose dependent | rect. | 24 | 23 |
| 267 | 128.80 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 6 |
| 276 | 128.94 | temperature | 15 | 10 | > th | dose dependent | sin | 1 | NA |
| 282 | 129.00 | atmosphere | 1005 | 270 | > th | dose independent | rect. | 16 | 4 |
| 288 | 129.07 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 8 |
| 293 | 129.18 | atmosphere | 1005 | 270 | > th | dose independent | rect. | 17 | 2 |
| 298 | 129.23 | temperature | 25 | 270 | > th | dose independent | rect. | 23 | 16 |
| 302 | 129.29 | atmosphere | 995 | 10 | > th | dose dependent | rect. | 2 | 21 |
| 306 | 129.35 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 12 |
| 322 | 129.46 | atmosphere | 995 | 10 | > th | dose dependent | rect. | 24 | 23 |
| 329 | 129.51 | atmosphere | 1015 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 372 | 130.06 | atmosphere | 1000 | 10 | > th | dose independent | rect. | 5 | 18 |
| 396 | 130.24 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 10 |
| 401 | 130.26 | atmosphere | 1015 | 270 | < th | dose dependent | rect. | 9 | 16 |
| 433 | 130.54 | atmosphere | 995 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 439 | 130.60 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 16 |
| 442 | 130.63 | temperature | 25 | 270 | < th | dose independent | rect. | 1 | 11 |
| 462 | 130.80 | atmosphere | 1000 | 270 | > th | dose dependent | rect. | 17 | 2 |
| 481 | 130.97 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 7 |
| 486 | 131.01 | atmosphere | 1015 | 90 | < th | dose dependent | rect. | 11 | 16 |
| 509 | 131.17 | atmosphere | 1015 | 10 | < th | dose dependent | rect. | 8 | 21 |
| 534 | 131.34 | atmosphere | 1000 | 10 | > th | dose dependent | rect. | 16 | 7 |
| 557 | 131.48 | atmosphere | 1000 | 30 | > th | dose independent | rect. | 21 | 23 |
| 561 | 131.50 | atmosphere | 1000 | 270 | > th | dose independent | rect. | 2 | 19 |
| 579 | 131.58 | temperature | 10 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 610 | 131.72 | atmosphere | 995 | 10 | > th | dose dependent | rect. | 15 | 21 |
| 634 | 131.84 | atmosphere | 1015 | 270 | < th | dose dependent | rect. | 20 | 6 |
| 645 | 131.93 | temperature | 15 | 10 | > th | dose dependent | rect. | 8 | 10 |
| 709 | 132.25 | wind | 9 | 14400 | > th | dose dependent | rect. | 3 | 11 |
| 717 | 132.27 | atmosphere | 1015 | 270 | < th | dose dependent | rect. | 21 | 4 |
| 820 | 132.67 | temperature | 25 | 270 | > th | dose independent | rect. | 6 | 9 |
| 857 | 132.81 | atmosphere | 995 | 270 | > th | dose dependent | rect. | 13 | 21 |
| 878 | 132.93 | temperature | 25 | 270 | < th | dose independent | sin | 5 | NA |
| 909 | 133.02 | wind | 9 | 14400 | > th | dose dependent | sin | 5 | NA |
| 942 | 133.12 | temperature | 25 | 270 | > th | dose independent | sin | 5 | NA |