Os01g0332500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Serine carboxypeptidase II-like protein.
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Os01g0332500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Serine carboxypeptidase II-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 74.41 | 0.405 | 2.99 | 0.939 | 0.252 | -1.49 | -0.0696 | 17.9 | -0.0177 | 13.7 | 31.3 | 155 | -- | -- |
| 82.64 | 0.427 | 3.12 | -0.161 | 0.28 | 0.376 | -0.00537 | -- | -0.0271 | 14.3 | 31.3 | 155 | -- | -- |
| 74.28 | 0.401 | 2.99 | 0.934 | 0.251 | -1.49 | -- | 18 | -0.0175 | 13.6 | 31.3 | 182 | -- | -- |
| 79.94 | 0.416 | 3.12 | -0.178 | 0.272 | 0.507 | -- | -- | -0.0144 | 13.9 | 31.3 | 135 | -- | -- |
| 77.95 | 0.411 | 2.98 | 0.979 | -- | -1.52 | -- | 19 | -0.0167 | -- | 31.3 | 182 | -- | -- |
| 85.61 | 0.434 | 3.12 | -0.134 | 0.345 | -- | 0.0811 | -- | -0.05 | 14.5 | -- | -- | -- | -- |
| 85.63 | 0.433 | 3.12 | -0.132 | 0.346 | -- | -- | -- | -0.0495 | 14.6 | -- | -- | -- | -- |
| 83.72 | 0.426 | 3.12 | -0.207 | -- | 0.632 | -- | -- | -0.0136 | -- | 31.21 | 135 | -- | -- |
| 80.8 | 0.419 | 3.11 | -- | 0.271 | 0.503 | -- | -- | -0.00459 | 13.5 | 31.3 | 135 | -- | -- |
| 92.64 | 0.45 | 3.13 | -0.147 | -- | -- | -- | -- | -0.0581 | -- | -- | -- | -- | -- |
| 86.09 | 0.434 | 3.12 | -- | 0.348 | -- | -- | -- | -0.0347 | 14.6 | -- | -- | -- | -- |
| 84.84 | 0.429 | 3.11 | -- | -- | 0.609 | -- | -- | 0.00756 | -- | 31.26 | 135 | -- | -- |
| 93.21 | 0.451 | 3.12 | -- | -- | -- | -- | -- | -0.0418 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 74.50 | temperature | 30 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 2 | 74.55 | temperature | 30 | 270 | > th | dose dependent | rect. | 10 | 5 |
| 21 | 74.83 | temperature | 30 | 270 | > th | dose dependent | sin | 3 | NA |
| 42 | 75.02 | temperature | 30 | 270 | > th | dose dependent | rect. | 13 | 1 |
| 98 | 75.49 | temperature | 30 | 270 | > th | dose dependent | no | NA | NA |
| 205 | 75.56 | temperature | 30 | 270 | > th | dose independent | rect. | 11 | 3 |
| 215 | 75.83 | atmosphere | 1010 | 10 | < th | dose dependent | rect. | 12 | 7 |
| 234 | 75.91 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 12 | 6 |
| 235 | 75.93 | atmosphere | 1010 | 90 | < th | dose dependent | rect. | 11 | 8 |
| 238 | 75.99 | atmosphere | 1005 | 270 | < th | dose dependent | rect. | 13 | 2 |
| 242 | 76.02 | atmosphere | 1005 | 90 | < th | dose dependent | rect. | 13 | 5 |
| 249 | 76.06 | temperature | 30 | 270 | > th | dose independent | rect. | 16 | 22 |
| 267 | 76.09 | temperature | 30 | 270 | > th | dose dependent | rect. | 13 | 23 |
| 281 | 76.21 | humidity | 60 | 270 | < th | dose independent | rect. | 11 | 4 |
| 462 | 76.50 | atmosphere | 1000 | 270 | < th | dose independent | rect. | 13 | 2 |
| 504 | 76.69 | atmosphere | 1000 | 270 | < th | dose independent | rect. | 11 | 5 |
| 509 | 76.74 | humidity | 70 | 270 | < th | dose dependent | rect. | 11 | 4 |
| 566 | 77.01 | humidity | 70 | 270 | < th | dose dependent | rect. | 10 | 6 |
| 572 | 77.05 | temperature | 30 | 270 | < th | dose independent | sin | 1 | NA |
| 586 | 77.12 | radiation | 20 | 720 | < th | dose independent | rect. | 16 | 21 |
| 599 | 77.22 | temperature | 30 | 270 | > th | dose independent | sin | 3 | NA |
| 608 | 77.28 | radiation | 20 | 720 | < th | dose independent | rect. | 24 | 13 |
| 648 | 77.42 | radiation | 20 | 720 | < th | dose independent | rect. | 3 | 10 |
| 658 | 77.47 | radiation | 20 | 720 | < th | dose independent | rect. | 18 | 19 |
| 659 | 77.47 | temperature | 25 | 720 | > th | dose dependent | rect. | 6 | 2 |
| 665 | 77.51 | radiation | 20 | 720 | < th | dose independent | rect. | 7 | 6 |
| 698 | 77.62 | temperature | 30 | 10 | > th | dose independent | rect. | 13 | 6 |
| 715 | 77.63 | humidity | 70 | 270 | < th | dose dependent | rect. | 12 | 1 |
| 718 | 77.66 | radiation | 20 | 720 | < th | dose independent | rect. | 16 | 18 |
| 723 | 77.68 | humidity | 70 | 270 | < th | dose dependent | rect. | 19 | 21 |
| 732 | 77.71 | humidity | 60 | 270 | > th | dose independent | rect. | 13 | 23 |
| 733 | 77.72 | radiation | 20 | 720 | < th | dose independent | sin | 7 | NA |
| 764 | 77.84 | radiation | 20 | 720 | < th | dose independent | rect. | 24 | 10 |
| 796 | 77.90 | humidity | 60 | 270 | < th | dose independent | rect. | 19 | 21 |
| 819 | 77.94 | humidity | 60 | 270 | < th | dose independent | rect. | 13 | 1 |
| 845 | 77.96 | radiation | 20 | 720 | < th | dose independent | rect. | 5 | 8 |
| 972 | 78.14 | radiation | 30 | 1440 | < th | dose dependent | rect. | 8 | 5 |
| 974 | 78.15 | temperature | 30 | 720 | > th | dose independent | sin | 8 | NA |