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Os01g0332100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Neutral invertase-like protein (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 14.2 (0.0383) R2 : 0.52
β1 : -- (--) R2dD : -- R2D : --
β2 : 3.81 (0.185) R2dC : 1.66 R2C : -1.34
β3 : 3.76 (0.172) R2dE : 1.86 R2E : -1.14
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.189 (0.0812) R2dN8 : 0.00763 R2N8 : -0.00712
σ : 0.72
deviance : 238.79
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_____
C
peak time of C : 15.2
E
wheather : radiation
threshold : 1.24
memory length : 68
response mode : < th
dose dependency : dose dependent
G
type of G : sin
peak or start time of G : 2.07
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
228.31 0.71 14.2 -0.44 3.88 3.83 0.802 -0.617 0.157 15.3 1.244 75 2.03 --
228.38 0.704 14.2 -0.451 3.88 3.84 1.37 -- 0.144 15.2 1.287 70 2.03 --
228.38 0.704 14.2 -0.43 3.88 3.83 -- -1.28 0.151 15.2 1.427 68 2.07 --
234.38 0.713 14.2 -0.406 3.87 3.82 -- -- 0.148 15.2 1.291 68 2.05 --
435.48 0.977 14.2 -0.447 -- 0.883 -- -1.09 -0.0612 -- 1.427 68 2.07 --
424 0.965 14.3 -0.433 1.12 -- -0.372 -- -0.049 19.7 -- -- -- --
424.37 0.965 14.3 -0.423 1.12 -- -- -- -0.0491 19.6 -- -- -- --
435.42 0.976 14.2 -0.438 -- 1.09 -- -- -0.0606 -- 0.6153 9 0.013 --
238.79 0.72 14.2 -- 3.81 3.76 -- -- 0.189 15.2 1.24 68 2.07 --
492.17 1.04 14.2 -0.439 -- -- -- -- -0.0662 -- -- -- -- --
429.09 0.969 14.3 -- 1.13 -- -- -- -0.00198 19.6 -- -- -- --
440.45 0.981 14.2 -- -- 1.09 -- -- -0.0121 -- 0.6199 9 4.5e-06 --
497.26 1.04 14.2 -- -- -- -- -- -0.0175 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 230.82 precipitation 0.1 270 < th dose independent rect. 4 17
2 230.82 precipitation 0.1 270 < th dose dependent rect. 4 17
3 231.80 radiation 1.0 90 < th dose dependent sin 8 NA
5 232.34 atmosphere 1015.0 270 < th dose independent rect. 4 17
6 232.63 temperature 10.0 270 > th dose independent rect. 21 7
7 232.63 temperature 30.0 270 < th dose independent rect. 21 7
8 232.63 humidity 50.0 270 > th dose independent rect. 21 7
11 232.63 atmosphere 995.0 270 > th dose independent rect. 21 7
12 232.63 radiation 1.0 270 < th dose independent rect. 21 7
17 232.63 temperature 10.0 270 > th dose independent rect. 4 17
18 232.63 radiation 1.0 270 < th dose dependent rect. 21 7
23 233.00 temperature 10.0 270 > th dose dependent rect. 15 8
24 233.20 wind 9.0 270 < th dose independent rect. 21 7
27 233.39 wind 9.0 270 < th dose independent rect. 4 17
28 233.40 precipitation 0.1 270 < th dose independent rect. 16 16
29 233.40 precipitation 0.1 270 < th dose dependent rect. 16 16
30 233.94 radiation 30.0 270 < th dose independent rect. 16 17
53 237.19 wind 9.0 270 < th dose independent rect. 16 16
56 237.48 precipitation 0.1 270 < th dose independent rect. 21 7
57 237.48 precipitation 0.1 270 < th dose dependent rect. 21 7
62 238.92 precipitation 0.1 270 < th dose independent rect. 3 6
63 238.92 precipitation 0.1 270 < th dose dependent rect. 3 6
64 239.11 radiation 40.0 270 < th dose independent rect. 3 7
67 239.28 temperature 10.0 270 > th dose independent rect. 8 8
68 239.28 atmosphere 1015.0 270 < th dose independent rect. 8 8
69 239.28 temperature 10.0 270 > th dose independent rect. 16 16
73 240.01 precipitation 0.1 270 < th dose independent rect. 8 8
74 240.01 precipitation 0.1 270 < th dose dependent rect. 8 8
75 240.24 radiation 1.0 90 < th dose independent sin 9 NA
79 241.07 wind 1.0 270 > th dose independent rect. 8 8
80 241.12 wind 9.0 270 < th dose independent rect. 8 8
81 241.14 humidity 50.0 270 > th dose dependent rect. 4 5
84 241.59 humidity 50.0 270 > th dose independent rect. 3 7
85 241.83 temperature 10.0 270 > th dose independent rect. 3 7
86 241.83 atmosphere 995.0 270 > th dose independent rect. 3 7
87 241.83 atmosphere 1015.0 270 < th dose independent rect. 3 7
88 241.83 temperature 10.0 270 > th dose independent rect. 10 17
90 241.98 radiation 1.0 30 < th dose independent sin 7 NA
91 242.02 wind 9.0 270 < th dose independent rect. 3 7
100 242.31 temperature 30.0 270 < th dose independent rect. 3 6
103 242.43 radiation 1.0 270 > th dose independent rect. 17 15
104 242.46 radiation 1.0 270 < th dose dependent sin 11 NA
121 244.19 humidity 50.0 270 > th dose dependent rect. 3 7
122 244.21 radiation 1.0 90 > th dose independent sin 9 NA
133 245.01 radiation 40.0 270 < th dose dependent rect. 4 5
138 245.43 wind 9.0 270 < th dose independent rect. 10 17
143 245.88 radiation 1.0 30 > th dose independent sin 7 NA
146 246.25 wind 9.0 270 < th dose dependent rect. 4 5
151 246.93 temperature 10.0 270 > th dose dependent rect. 3 6
152 246.99 temperature 10.0 270 > th dose dependent rect. 16 17
155 247.16 atmosphere 995.0 270 > th dose independent rect. 8 8
160 247.63 wind 9.0 270 < th dose independent rect. 14 9
165 247.78 temperature 10.0 270 > th dose independent rect. 14 9
166 247.78 temperature 10.0 270 > th dose independent rect. 23 15
167 247.78 atmosphere 995.0 270 > th dose independent rect. 23 15
170 247.94 wind 9.0 270 < th dose independent rect. 23 15
182 248.46 radiation 1.0 90 < th dose dependent rect. 23 17
185 248.87 wind 9.0 270 < th dose dependent rect. 3 7
214 250.58 precipitation 0.1 270 < th dose independent rect. 14 9
215 250.58 precipitation 0.1 270 < th dose dependent rect. 14 9
216 250.60 radiation 1.0 90 < th dose dependent rect. 23 7
217 250.65 precipitation 0.1 270 < th dose independent rect. 9 18
218 250.65 precipitation 0.1 270 < th dose dependent rect. 9 18
219 250.71 atmosphere 995.0 270 > th dose independent rect. 16 16
234 251.69 radiation 40.0 270 < th dose independent rect. 14 9
236 251.71 humidity 50.0 270 > th dose independent rect. 9 7
247 252.28 radiation 1.0 270 > th dose independent rect. 8 8
252 252.32 radiation 1.0 90 < th dose dependent rect. 21 19
253 252.35 radiation 1.0 90 > th dose independent rect. 17 18
256 252.42 wind 1.0 270 > th dose independent rect. 14 9
257 252.55 humidity 50.0 270 > th dose independent rect. 9 19
264 252.92 precipitation 0.1 270 < th dose independent rect. 15 7
265 252.92 precipitation 0.1 270 < th dose dependent rect. 15 7
266 252.96 humidity 50.0 270 > th dose independent rect. 10 17
272 253.46 temperature 15.0 270 > th dose independent rect. 15 7
281 253.96 wind 9.0 270 < th dose independent rect. 15 7
288 254.47 precipitation 0.1 270 < th dose independent rect. 23 15
289 254.47 precipitation 0.1 270 < th dose dependent rect. 23 15
292 254.57 wind 9.0 90 < th dose dependent rect. 5 16
294 254.65 atmosphere 995.0 270 > th dose independent rect. 4 17
296 254.74 temperature 10.0 270 > th dose independent rect. 22 17
300 255.04 wind 1.0 270 > th dose independent rect. 15 7
304 255.28 wind 9.0 270 < th dose independent rect. 22 17
306 255.40 radiation 40.0 270 < th dose independent rect. 15 7
308 255.61 radiation 1.0 90 < th dose independent rect. 23 17
328 255.78 temperature 10.0 90 > th dose independent rect. 23 6
329 255.78 temperature 30.0 90 < th dose independent rect. 23 6
330 255.78 humidity 50.0 90 > th dose independent rect. 23 6
333 255.78 atmosphere 995.0 90 > th dose independent rect. 23 6
334 255.78 radiation 20.0 90 < th dose independent rect. 23 6
338 255.79 wind 9.0 90 < th dose independent rect. 23 6
341 255.83 radiation 40.0 90 < th dose dependent rect. 23 6
347 256.06 radiation 1.0 90 < th dose independent rect. 23 6
349 256.08 atmosphere 995.0 270 > th dose independent rect. 22 17
350 256.10 radiation 1.0 90 < th dose independent rect. 23 8
360 256.47 humidity 50.0 270 > th dose dependent rect. 20 8
387 257.03 radiation 40.0 270 < th dose independent rect. 4 17
398 257.68 wind 1.0 90 > th dose independent rect. 11 18
408 258.21 atmosphere 1015.0 270 < th dose independent rect. 23 15
418 258.43 atmosphere 995.0 270 > th dose independent rect. 10 17
425 258.62 temperature 10.0 90 > th dose dependent rect. 5 18
437 258.91 radiation 1.0 90 < th dose independent rect. 21 19
446 259.39 precipitation 0.1 90 < th dose independent rect. 23 6
447 259.39 precipitation 0.1 90 < th dose dependent rect. 23 6
448 259.41 radiation 1.0 90 < th dose independent rect. 21 10
458 260.28 precipitation 0.1 270 < th dose independent rect. 22 17
459 260.28 precipitation 0.1 270 < th dose dependent rect. 22 17
479 260.94 radiation 40.0 270 < th dose dependent rect. 16 17
483 261.03 atmosphere 1015.0 270 < th dose independent rect. 15 7
499 261.35 radiation 1.0 270 > th dose independent sin 12 NA
572 262.69 radiation 10.0 10 < th dose dependent rect. 23 7
587 263.03 radiation 1.0 90 > th dose independent rect. 4 7
634 264.00 wind 1.0 90 > th dose independent rect. 23 6
641 264.33 humidity 50.0 90 > th dose dependent rect. 23 6
688 265.27 radiation 40.0 270 < th dose independent rect. 3 19
710 265.65 humidity 50.0 270 > th dose independent rect. 23 15
733 266.03 humidity 50.0 270 > th dose independent rect. 17 15
745 266.38 atmosphere 1015.0 270 < th dose independent rect. 21 7
768 266.63 humidity 90.0 270 < th dose independent rect. 9 6
770 266.66 wind 1.0 270 > th dose independent rect. 21 7
796 267.52 wind 1.0 90 > th dose independent rect. 11 6
861 268.88 radiation 1.0 10 > th dose independent rect. 5 6
893 269.25 temperature 15.0 90 > th dose independent rect. 11 6
941 270.59 atmosphere 1015.0 90 < th dose independent rect. 11 6
955 270.77 atmosphere 995.0 270 > th dose independent rect. 15 7
968 271.23 wind 9.0 90 < th dose independent rect. 11 6
979 271.44 humidity 50.0 270 > th dose independent rect. 22 17
981 271.53 atmosphere 1015.0 90 < th dose independent rect. 23 6