Os01g0330300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase C1A, papain family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0330300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Peptidase C1A, papain family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 136.7 | 0.549 | 8.3 | 0.671 | 0.694 | -1.38 | 0.3 | 0.0971 | -0.447 | 9.43 | 22.14 | 1406 | -- | -- |
| 136.72 | 0.545 | 8.31 | 0.638 | 0.692 | -1.38 | 0.292 | -- | -0.452 | 9.42 | 22.1 | 1400 | -- | -- |
| 136.97 | 0.545 | 8.3 | 0.674 | 0.673 | -1.35 | -- | 0.14 | -0.445 | 9.44 | 22.2 | 1351 | -- | -- |
| 137.02 | 0.545 | 8.31 | 0.652 | 0.689 | -1.37 | -- | -- | -0.454 | 9.53 | 22.1 | 1400 | -- | -- |
| 150.48 | 0.571 | 8.32 | 0.636 | -- | -1.39 | -- | 0.0777 | -0.441 | -- | 22.16 | 852 | -- | -- |
| 205.76 | 0.672 | 8.41 | 0.144 | 0.714 | -- | 0.162 | -- | -0.908 | 9.86 | -- | -- | -- | -- |
| 205.85 | 0.672 | 8.41 | 0.15 | 0.713 | -- | -- | -- | -0.907 | 9.92 | -- | -- | -- | -- |
| 150.16 | 0.571 | 8.32 | 0.593 | -- | -1.36 | -- | -- | -0.447 | -- | 22.22 | 847 | -- | -- |
| 145.33 | 0.561 | 8.34 | -- | 0.531 | -1.15 | -- | -- | -0.551 | 9.27 | 22.3 | 1019 | -- | -- |
| 236.33 | 0.718 | 8.43 | 0.142 | -- | -- | -- | -- | -0.907 | -- | -- | -- | -- | -- |
| 206.45 | 0.672 | 8.41 | -- | 0.712 | -- | -- | -- | -0.924 | 9.9 | -- | -- | -- | -- |
| 158.88 | 0.587 | 8.35 | -- | -- | -1.26 | -- | -- | -0.544 | -- | 22.22 | 846 | -- | -- |
| 236.87 | 0.718 | 8.43 | -- | -- | -- | -- | -- | -0.923 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 141.55 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 12 |
| 24 | 142.58 | temperature | 25 | 1440 | < th | dose dependent | sin | 13 | NA |
| 51 | 143.20 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 66 | 143.41 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 69 | 143.47 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 71 | 143.52 | temperature | 15 | 1440 | > th | dose dependent | rect. | 24 | 5 |
| 75 | 143.58 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 150 | 144.20 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 261 | 145.15 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 371 | 145.92 | temperature | 20 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 401 | 146.09 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 417 | 146.19 | temperature | 25 | 720 | < th | dose dependent | rect. | 24 | 23 |
| 436 | 146.30 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 446 | 146.35 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 465 | 146.48 | temperature | 20 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 468 | 146.48 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 473 | 146.51 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 23 |
| 530 | 146.76 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 16 |
| 564 | 146.92 | temperature | 15 | 270 | > th | dose dependent | rect. | 1 | 23 |
| 653 | 147.38 | temperature | 15 | 720 | > th | dose dependent | sin | 11 | NA |
| 669 | 147.43 | temperature | 15 | 270 | > th | dose dependent | no | NA | NA |
| 783 | 147.94 | temperature | 15 | 270 | > th | dose dependent | rect. | 19 | 23 |
| 862 | 148.26 | temperature | 15 | 270 | > th | dose dependent | rect. | 4 | 23 |
| 874 | 148.32 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 921 | 148.51 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 18 |
| 924 | 148.52 | temperature | 15 | 720 | > th | dose dependent | rect. | 15 | 18 |
| 963 | 148.63 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 21 |
| 981 | 148.70 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 6 |
| 996 | 148.75 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 6 |