Os01g0329900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Lipase homolog (Fragment).
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Os01g0329900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Lipase homolog (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 415.16 | 0.957 | 7.62 | -7.46 | 2.93 | 2.95 | 1.97 | -6.99 | -1.27 | 4.04 | 26.15 | 1177 | -- | -- |
| 427.95 | 0.963 | 7.46 | -5.76 | 2.99 | 2.15 | 1.5 | -- | -0.935 | 3.94 | 26.18 | 1153 | -- | -- |
| 425.53 | 0.961 | 7.6 | -7.36 | 2.94 | 2.89 | -- | -6.62 | -1.17 | 3.96 | 26.6 | 1194 | -- | -- |
| 434.22 | 0.971 | 7.42 | -5.86 | 2.95 | 2.2 | -- | -- | -0.855 | 3.92 | 26.75 | 1184 | -- | -- |
| 869.12 | 1.37 | 7.68 | -7.35 | -- | 3.57 | -- | -5.39 | -1.52 | -- | 24.4 | 1186 | -- | -- |
| 607.64 | 1.16 | 7.41 | -5.18 | 3.21 | -- | 2.09 | -- | -0.809 | 3.61 | -- | -- | -- | -- |
| 620.91 | 1.17 | 7.42 | -5.22 | 3.22 | -- | -- | -- | -0.821 | 3.56 | -- | -- | -- | -- |
| 882.86 | 1.38 | 7.51 | -6.02 | -- | 3 | -- | -- | -1.13 | -- | 24.63 | 1191 | -- | -- |
| 1273.92 | 1.66 | 7.25 | -- | 2.92 | 1.09 | -- | -- | -0.102 | 3.78 | 30.54 | 1131 | -- | -- |
| 1199.7 | 1.62 | 7.42 | -5.08 | -- | -- | -- | -- | -0.735 | -- | -- | -- | -- | -- |
| 1337.83 | 1.71 | 7.28 | -- | 3.12 | -- | -- | -- | -0.24 | 3.57 | -- | -- | -- | -- |
| 1641.46 | 1.89 | 7.24 | -- | -- | -3.08 | -- | -- | 0.0482 | -- | 24.63 | 1191 | -- | -- |
| 1880.48 | 2.02 | 7.29 | -- | -- | -- | -- | -- | -0.171 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 425.09 | temperature | 25 | 720 | > th | dose dependent | rect. | 17 | 16 |
| 2 | 426.42 | temperature | 25 | 720 | > th | dose dependent | rect. | 17 | 2 |
| 4 | 426.77 | temperature | 10 | 270 | > th | dose dependent | rect. | 15 | 14 |
| 8 | 429.63 | temperature | 25 | 720 | > th | dose dependent | rect. | 16 | 6 |
| 20 | 432.48 | temperature | 25 | 720 | > th | dose dependent | sin | 13 | NA |
| 77 | 440.95 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 7 |
| 80 | 441.01 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 12 |
| 88 | 441.15 | temperature | 25 | 1440 | > th | dose dependent | sin | 19 | NA |
| 166 | 442.41 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 17 |
| 174 | 442.53 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 14 |
| 237 | 443.02 | temperature | 25 | 1440 | > th | dose dependent | rect. | 21 | 23 |
| 260 | 443.17 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 305 | 443.77 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 308 | 443.82 | temperature | 25 | 1440 | > th | dose dependent | rect. | 18 | 23 |
| 450 | 449.86 | temperature | 30 | 1440 | > th | dose independent | rect. | 15 | 4 |
| 472 | 450.57 | temperature | 30 | 720 | < th | dose independent | sin | 12 | NA |
| 474 | 450.77 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 13 |
| 479 | 450.97 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 21 |
| 483 | 451.02 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 4 |
| 484 | 451.05 | temperature | 30 | 1440 | > th | dose independent | sin | 13 | NA |
| 492 | 451.20 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 17 |
| 495 | 451.25 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 7 |
| 505 | 451.47 | wind | 7 | 43200 | > th | dose independent | rect. | 19 | 21 |
| 513 | 451.59 | temperature | 30 | 1440 | < th | dose independent | sin | 14 | NA |
| 561 | 451.67 | temperature | 30 | 1440 | > th | dose independent | rect. | 14 | 21 |
| 575 | 451.80 | temperature | 30 | 1440 | > th | dose independent | rect. | 15 | 19 |
| 579 | 451.83 | wind | 7 | 43200 | < th | dose independent | rect. | 19 | 21 |
| 620 | 452.01 | radiation | 20 | 1440 | > th | dose independent | rect. | 16 | 15 |
| 764 | 452.41 | wind | 5 | 43200 | > th | dose dependent | rect. | 5 | 11 |
| 783 | 452.47 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 19 |
| 787 | 452.50 | wind | 5 | 43200 | > th | dose dependent | rect. | 6 | 9 |
| 795 | 452.56 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 10 |
| 805 | 452.65 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 13 |
| 842 | 452.96 | wind | 5 | 43200 | > th | dose dependent | rect. | 24 | 16 |
| 874 | 453.24 | wind | 5 | 43200 | > th | dose dependent | sin | 2 | NA |
| 892 | 453.50 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 10 |
| 918 | 453.56 | temperature | 30 | 1440 | < th | dose independent | rect. | 17 | 23 |
| 919 | 453.57 | temperature | 30 | 1440 | < th | dose independent | rect. | 23 | 20 |
| 920 | 453.58 | temperature | 30 | 1440 | < th | dose independent | rect. | 21 | 22 |
| 953 | 453.66 | temperature | 30 | 1440 | < th | dose independent | rect. | 23 | 23 |
| 971 | 453.71 | temperature | 30 | 1440 | < th | dose independent | no | NA | NA |
| 981 | 453.72 | wind | 5 | 43200 | > th | dose dependent | rect. | 18 | 22 |
| 987 | 453.73 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 23 |