Os01g0328900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Galectin, galactose-binding lectin family protein.
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Os01g0328900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Galectin, galactose-binding lectin family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 42.97 | 0.308 | 8.1 | -1.08 | 1.12 | -0.567 | -0.462 | 0.458 | -0.347 | 6.83 | 15.59 | 30 | -- | -- |
| 43.9 | 0.309 | 8.1 | -1.06 | 1.14 | -0.504 | -0.7 | -- | -0.346 | 7.07 | 14.88 | 29 | -- | -- |
| 43.47 | 0.307 | 8.1 | -1.09 | 1.12 | -0.58 | -- | 0.552 | -0.345 | 6.79 | 15.36 | 29 | -- | -- |
| 45.13 | 0.313 | 8.1 | -1.1 | 1.14 | -0.56 | -- | -- | -0.346 | 6.83 | 14.94 | 39 | -- | -- |
| 97.34 | 0.462 | 8.12 | -1.07 | -- | -0.746 | -- | 0.451 | -0.314 | -- | 6.007 | 6 | -- | -- |
| 48.19 | 0.325 | 8.08 | -1.06 | 1.38 | -- | -0.773 | -- | -0.302 | 8.54 | -- | -- | -- | -- |
| 50.12 | 0.332 | 8.08 | -1.08 | 1.38 | -- | -- | -- | -0.302 | 8.55 | -- | -- | -- | -- |
| 98.56 | 0.462 | 8.13 | -1.14 | -- | -0.8 | -- | -- | -0.324 | -- | 6.635 | 2 | -- | -- |
| 76.12 | 0.406 | 8.08 | -- | 1.17 | -0.607 | -- | -- | -0.24 | 6.51 | 10 | 53 | -- | -- |
| 156.72 | 0.585 | 8.12 | -1.08 | -- | -- | -- | -- | -0.289 | -- | -- | -- | -- | -- |
| 81.11 | 0.421 | 8.06 | -- | 1.37 | -- | -- | -- | -0.181 | 8.6 | -- | -- | -- | -- |
| 128.19 | 0.527 | 8.1 | -- | -- | -0.763 | -- | -- | -0.197 | -- | 5.945 | 2 | -- | -- |
| 187.44 | 0.639 | 8.09 | -- | -- | -- | -- | -- | -0.17 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 39.67 | temperature | 25 | 10 | < th | dose independent | rect. | 13 | 6 |
| 7 | 40.05 | radiation | 10 | 90 | < th | dose dependent | rect. | 21 | 21 |
| 13 | 40.35 | temperature | 30 | 90 | < th | dose dependent | rect. | 12 | 7 |
| 14 | 40.40 | temperature | 25 | 30 | < th | dose independent | rect. | 13 | 16 |
| 34 | 40.82 | radiation | 10 | 90 | < th | dose dependent | rect. | 9 | 9 |
| 37 | 40.86 | radiation | 10 | 90 | < th | dose independent | rect. | 22 | 20 |
| 48 | 41.03 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 8 |
| 70 | 41.39 | radiation | 1 | 10 | < th | dose independent | rect. | 11 | 7 |
| 94 | 41.59 | radiation | 1 | 10 | < th | dose independent | rect. | 13 | 5 |
| 101 | 41.63 | temperature | 15 | 720 | > th | dose dependent | rect. | 1 | 2 |
| 105 | 41.66 | radiation | 20 | 90 | < th | dose dependent | rect. | 19 | 23 |
| 122 | 41.77 | radiation | 1 | 10 | < th | dose dependent | rect. | 11 | 7 |
| 152 | 41.98 | radiation | 1 | 10 | < th | dose dependent | rect. | 13 | 5 |
| 168 | 42.09 | temperature | 30 | 30 | < th | dose dependent | rect. | 13 | 16 |
| 173 | 42.13 | radiation | 10 | 90 | < th | dose dependent | rect. | 1 | 17 |
| 191 | 42.30 | radiation | 1 | 10 | < th | dose independent | rect. | 15 | 3 |
| 214 | 42.35 | temperature | 25 | 720 | < th | dose dependent | rect. | 23 | 5 |
| 220 | 42.37 | radiation | 20 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 232 | 42.41 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 2 |
| 241 | 42.44 | radiation | 10 | 90 | < th | dose independent | rect. | 1 | 17 |
| 244 | 42.46 | humidity | 50 | 30 | > th | dose dependent | rect. | 12 | 6 |
| 251 | 42.49 | temperature | 25 | 270 | < th | dose independent | rect. | 4 | 7 |
| 262 | 42.54 | temperature | 25 | 720 | < th | dose dependent | rect. | 24 | 3 |
| 268 | 42.56 | humidity | 70 | 30 | > th | dose independent | rect. | 12 | 6 |
| 288 | 42.61 | temperature | 30 | 270 | < th | dose dependent | rect. | 13 | 2 |
| 298 | 42.65 | temperature | 25 | 10 | > th | dose independent | rect. | 16 | 10 |
| 301 | 42.65 | radiation | 1 | 10 | < th | dose independent | rect. | 1 | 17 |
| 324 | 42.70 | radiation | 10 | 90 | < th | dose independent | rect. | 19 | 23 |
| 339 | 42.75 | radiation | 1 | 10 | < th | dose dependent | rect. | 15 | 3 |
| 397 | 42.88 | radiation | 20 | 270 | < th | dose independent | rect. | 11 | 5 |
| 398 | 42.88 | radiation | 40 | 270 | < th | dose dependent | rect. | 11 | 5 |
| 402 | 42.89 | radiation | 40 | 270 | < th | dose dependent | rect. | 11 | 17 |
| 459 | 43.00 | radiation | 10 | 90 | > th | dose independent | rect. | 13 | 23 |
| 479 | 43.05 | temperature | 25 | 270 | < th | dose dependent | rect. | 7 | 1 |
| 512 | 43.10 | radiation | 20 | 10 | < th | dose dependent | sin | 5 | NA |
| 517 | 43.12 | temperature | 20 | 720 | < th | dose independent | rect. | 24 | 3 |
| 528 | 43.14 | temperature | 15 | 10 | > th | dose dependent | rect. | 16 | 9 |
| 562 | 43.19 | radiation | 20 | 270 | < th | dose independent | rect. | 11 | 17 |
| 571 | 43.21 | temperature | 25 | 10 | > th | dose independent | rect. | 14 | 12 |
| 585 | 43.22 | temperature | 20 | 270 | > th | dose dependent | rect. | 23 | 12 |
| 625 | 43.29 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 7 |
| 643 | 43.32 | temperature | 25 | 30 | > th | dose independent | rect. | 16 | 14 |
| 654 | 43.34 | temperature | 20 | 720 | < th | dose independent | rect. | 23 | 7 |
| 702 | 43.40 | temperature | 25 | 10 | > th | dose independent | sin | 14 | NA |
| 717 | 43.42 | radiation | 20 | 30 | < th | dose dependent | no | NA | NA |
| 729 | 43.42 | radiation | 20 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 730 | 43.42 | radiation | 20 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 749 | 43.44 | radiation | 20 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 763 | 43.46 | radiation | 20 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 775 | 43.48 | temperature | 20 | 10 | > th | dose independent | rect. | 18 | 7 |
| 787 | 43.49 | radiation | 20 | 90 | < th | dose dependent | rect. | 6 | 23 |
| 788 | 43.50 | temperature | 25 | 10 | < th | dose independent | sin | 15 | NA |
| 815 | 43.53 | temperature | 20 | 270 | > th | dose independent | rect. | 24 | 15 |
| 854 | 43.58 | radiation | 10 | 90 | > th | dose independent | rect. | 15 | 21 |
| 880 | 43.60 | temperature | 15 | 90 | > th | dose dependent | rect. | 18 | 7 |
| 913 | 43.63 | temperature | 20 | 270 | > th | dose dependent | sin | 7 | NA |
| 936 | 43.66 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 1 |
| 982 | 43.69 | radiation | 20 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 987 | 43.70 | radiation | 10 | 90 | < th | dose independent | rect. | 6 | 23 |
| 990 | 43.70 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 1 |