Os01g0327600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0327600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 51.63 | 0.338 | 7.48 | 0.684 | 0.0584 | -0.671 | -0.597 | -0.0509 | 0.42 | 21.5 | 78 | 1724 | -- | -- |
| 51.63 | 0.335 | 7.48 | 0.689 | 0.061 | -0.674 | -0.598 | -- | 0.421 | 21.4 | 77.76 | 1726 | -- | -- |
| 52.76 | 0.338 | 7.48 | 0.72 | 0.0944 | -0.713 | -- | 0.0708 | 0.427 | 18.7 | 77.65 | 1732 | -- | -- |
| 52.77 | 0.338 | 7.48 | 0.715 | 0.0948 | -0.705 | -- | -- | 0.425 | 18.8 | 77.66 | 1734 | -- | -- |
| 52.87 | 0.339 | 7.48 | 0.743 | -- | -0.538 | -- | 0.123 | 0.445 | -- | 75.98 | 1650 | -- | -- |
| 57.81 | 0.356 | 7.49 | 0.655 | 0.0593 | -- | -0.56 | -- | 0.39 | 23.4 | -- | -- | -- | -- |
| 59.11 | 0.36 | 7.49 | 0.677 | 0.0693 | -- | -- | -- | 0.392 | 1.26 | -- | -- | -- | -- |
| 52.87 | 0.339 | 7.48 | 0.737 | -- | -0.535 | -- | -- | 0.442 | -- | 75.79 | 1650 | -- | -- |
| 65.63 | 0.377 | 7.5 | -- | 0.0921 | -0.688 | -- | -- | 0.358 | 19 | 79 | 1745 | -- | -- |
| 59.4 | 0.36 | 7.49 | 0.68 | -- | -- | -- | -- | 0.393 | -- | -- | -- | -- | -- |
| 71.19 | 0.395 | 7.51 | -- | 0.0812 | -- | -- | -- | 0.316 | 1.57 | -- | -- | -- | -- |
| 64.82 | 0.375 | 7.5 | -- | -- | -0.703 | -- | -- | 0.354 | -- | 83.01 | 1558 | -- | -- |
| 71.59 | 0.395 | 7.51 | -- | -- | -- | -- | -- | 0.318 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 49.65 | temperature | 20.0 | 270 | > th | dose independent | rect. | 18 | 19 |
| 2 | 49.75 | temperature | 20.0 | 270 | > th | dose independent | rect. | 19 | 17 |
| 8 | 50.11 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 14 | 50.45 | temperature | 20.0 | 270 | > th | dose independent | rect. | 4 | 9 |
| 18 | 50.57 | wind | 3.0 | 14400 | < th | dose independent | rect. | 2 | 2 |
| 24 | 50.72 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 26 | 50.72 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 27 | 50.73 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 2 | 2 |
| 28 | 50.78 | wind | 9.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 29 | 50.78 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 30 | 50.89 | wind | 9.0 | 14400 | < th | dose independent | rect. | 8 | 3 |
| 32 | 50.93 | wind | 9.0 | 14400 | > th | dose independent | rect. | 7 | 4 |
| 35 | 50.96 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 41 | 50.98 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 42 | 51.01 | wind | 3.0 | 14400 | > th | dose independent | rect. | 2 | 2 |
| 46 | 51.05 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 53 | 51.13 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 57 | 51.14 | wind | 3.0 | 14400 | < th | dose independent | rect. | 22 | 7 |
| 61 | 51.17 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 23 | 13 |
| 71 | 51.27 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 8 | 3 |
| 77 | 51.29 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 2 | 2 |
| 78 | 51.30 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 19 | 17 |
| 88 | 51.35 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 23 | 16 |
| 89 | 51.36 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 24 | 12 |
| 91 | 51.36 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 21 | 18 |
| 96 | 51.40 | wind | 3.0 | 14400 | > th | dose independent | rect. | 22 | 7 |
| 121 | 51.48 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 3 | 9 |
| 125 | 51.48 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 7 |
| 137 | 51.53 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 24 | 15 |
| 146 | 51.56 | humidity | 80.0 | 1440 | < th | dose independent | sin | 6 | NA |
| 149 | 51.57 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 151 | 51.57 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 2 |
| 156 | 51.59 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 158 | 51.59 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 162 | 51.61 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 173 | 51.65 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 11 | 5 |
| 179 | 51.66 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 197 | 51.69 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 7 |
| 209 | 51.72 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 3 |
| 210 | 51.72 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 1 | 13 |
| 222 | 51.73 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 23 | 8 |
| 224 | 51.74 | humidity | 80.0 | 1440 | > th | dose independent | sin | 5 | NA |
| 230 | 51.74 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 9 |
| 245 | 51.78 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 5 | 3 |
| 253 | 51.78 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 5 | 3 |
| 269 | 51.80 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 21 | 18 |
| 271 | 51.81 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 3 |
| 272 | 51.81 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 11 | 5 |
| 275 | 51.81 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 11 | 5 |
| 289 | 51.83 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 20 | 19 |
| 292 | 51.84 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 4 | 8 |
| 307 | 51.86 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 3 | 9 |
| 317 | 51.88 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 7 |
| 319 | 51.88 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 7 |
| 349 | 51.92 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 8 |
| 367 | 51.94 | humidity | 70.0 | 1440 | > th | dose dependent | sin | 5 | NA |
| 374 | 51.95 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 10 |
| 382 | 51.96 | humidity | 80.0 | 10 | < th | dose independent | rect. | 15 | 17 |
| 388 | 51.97 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 10 |
| 390 | 51.97 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 392 | 51.97 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 6 |
| 396 | 51.97 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 10 |
| 418 | 52.00 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 16 |
| 424 | 52.00 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 16 |
| 433 | 52.02 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 16 |
| 461 | 52.05 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 462 | 52.05 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 8 |
| 464 | 52.05 | humidity | 80.0 | 90 | < th | dose independent | rect. | 15 | 17 |
| 474 | 52.06 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 483 | 52.07 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 484 | 52.07 | wind | 1.0 | 4320 | > th | dose independent | rect. | 17 | 2 |
| 490 | 52.07 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 19 | 1 |
| 495 | 52.08 | humidity | 80.0 | 720 | < th | dose independent | rect. | 10 | 22 |
| 509 | 52.09 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 24 | 17 |
| 526 | 52.11 | temperature | 20.0 | 270 | > th | dose independent | sin | 6 | NA |
| 529 | 52.11 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 6 |
| 543 | 52.12 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 9 | 2 |
| 551 | 52.13 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 587 | 52.17 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 596 | 52.18 | wind | 1.0 | 43200 | < th | dose independent | rect. | 1 | 11 |
| 642 | 52.21 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 643 | 52.21 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 7 | 4 |
| 649 | 52.22 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 2 |
| 661 | 52.22 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 2 |
| 663 | 52.22 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 2 |
| 729 | 52.27 | humidity | 80.0 | 1440 | < th | dose independent | no | NA | NA |
| 730 | 52.27 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 2 |
| 737 | 52.27 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 13 | 23 |
| 800 | 52.32 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 5 | 23 |
| 810 | 52.33 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 3 |
| 813 | 52.33 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 9 | 23 |
| 838 | 52.35 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 839 | 52.35 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 9 | 2 |
| 859 | 52.35 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 13 |
| 915 | 52.38 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 9 | 2 |
| 978 | 52.42 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 2 | 6 |