Os01g0327400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Peroxidase (Fragment).
FiT-DB / Search/ Help/ Sample detail
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Os01g0327400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Peroxidase (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 127.46 | 0.53 | 11.8 | -0.581 | 1.45 | -1.15 | -0.361 | -2.58 | 0.457 | 1.7 | 21 | 12 | -- | -- |
| 129.79 | 0.531 | 11.7 | -0.176 | 1.41 | -1.32 | 0.259 | -- | 0.573 | 1.53 | 23 | 22 | -- | -- |
| 127.69 | 0.526 | 11.8 | -0.49 | 1.44 | -1.17 | -- | -2.09 | 0.48 | 1.69 | 21.53 | 12 | -- | -- |
| 130.08 | 0.531 | 11.7 | -0.151 | 1.4 | -1.36 | -- | -- | 0.569 | 1.55 | 23.1 | 21 | -- | -- |
| 210.6 | 0.676 | 11.7 | -0.11 | -- | -2.61 | -- | -1.08 | 0.749 | -- | 23.1 | 8 | -- | -- |
| 157.12 | 0.588 | 11.8 | -0.388 | 1.92 | -- | 0.658 | -- | 0.371 | 1.92 | -- | -- | -- | -- |
| 158.79 | 0.59 | 11.8 | -0.409 | 1.92 | -- | -- | -- | 0.367 | 1.92 | -- | -- | -- | -- |
| 210.19 | 0.675 | 11.7 | 0.116 | -- | -2.63 | -- | -- | 0.767 | -- | 23.17 | 8 | -- | -- |
| 130.42 | 0.532 | 11.7 | -- | 1.42 | -1.34 | -- | -- | 0.579 | 1.31 | 23.1 | 83 | -- | -- |
| 380.6 | 0.912 | 11.8 | -0.329 | -- | -- | -- | -- | 0.411 | -- | -- | -- | -- | -- |
| 163.19 | 0.598 | 11.8 | -- | 1.91 | -- | -- | -- | 0.412 | 1.91 | -- | -- | -- | -- |
| 210.48 | 0.676 | 11.7 | -- | -- | -2.6 | -- | -- | 0.752 | -- | 23.2 | 13 | -- | -- |
| 383.46 | 0.914 | 11.7 | -- | -- | -- | -- | -- | 0.448 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 124.29 | temperature | 30 | 90 | < th | dose dependent | rect. | 1 | 22 |
| 3 | 125.96 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 5 | 126.39 | temperature | 10 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 8 | 126.56 | temperature | 30 | 10 | < th | dose dependent | rect. | 2 | 21 |
| 9 | 126.57 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 19 |
| 11 | 126.59 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 21 |
| 39 | 128.00 | temperature | 20 | 10 | > th | dose dependent | rect. | 9 | 23 |
| 41 | 128.04 | temperature | 20 | 10 | > th | dose dependent | no | NA | NA |
| 46 | 128.23 | temperature | 10 | 270 | > th | dose dependent | rect. | 19 | 23 |
| 48 | 128.32 | temperature | 30 | 270 | < th | dose independent | rect. | 24 | 21 |
| 49 | 128.33 | temperature | 30 | 10 | < th | dose dependent | rect. | 12 | 11 |
| 57 | 128.55 | temperature | 20 | 30 | > th | dose dependent | rect. | 5 | 23 |
| 70 | 128.90 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 76 | 129.09 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 79 | 129.20 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 87 | 129.38 | temperature | 30 | 270 | < th | dose independent | rect. | 1 | 19 |
| 93 | 129.47 | temperature | 20 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 100 | 129.54 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 113 | 129.83 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 173 | 130.76 | temperature | 20 | 90 | > th | dose dependent | rect. | 9 | 18 |
| 186 | 130.91 | temperature | 20 | 10 | > th | dose dependent | sin | 20 | NA |
| 199 | 131.15 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 212 | 131.27 | temperature | 20 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 239 | 131.54 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 245 | 131.60 | temperature | 30 | 270 | < th | dose independent | rect. | 11 | 9 |
| 246 | 131.60 | temperature | 30 | 10 | < th | dose dependent | rect. | 10 | 13 |
| 263 | 131.75 | wind | 9 | 43200 | > th | dose independent | rect. | 16 | 5 |
| 282 | 131.94 | temperature | 30 | 270 | < th | dose independent | rect. | 13 | 7 |
| 290 | 132.02 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 293 | 132.05 | humidity | 50 | 90 | > th | dose dependent | rect. | 11 | 11 |
| 300 | 132.11 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 310 | 132.16 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 323 | 132.21 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 331 | 132.26 | wind | 3 | 4320 | > th | dose dependent | rect. | 20 | 2 |
| 340 | 132.28 | temperature | 30 | 10 | < th | dose dependent | rect. | 8 | 15 |
| 350 | 132.31 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 395 | 132.50 | wind | 9 | 4320 | > th | dose independent | rect. | 17 | 4 |
| 410 | 132.58 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 425 | 132.64 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 426 | 132.65 | wind | 5 | 4320 | < th | dose independent | rect. | 20 | 2 |
| 448 | 132.74 | wind | 5 | 4320 | > th | dose independent | rect. | 20 | 2 |
| 472 | 132.80 | wind | 7 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 478 | 132.81 | wind | 7 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 482 | 132.82 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 494 | 132.87 | wind | 9 | 43200 | < th | dose independent | rect. | 16 | 5 |
| 521 | 132.98 | wind | 7 | 4320 | > th | dose dependent | rect. | 17 | 4 |
| 541 | 133.05 | wind | 3 | 4320 | > th | dose dependent | rect. | 20 | 5 |
| 545 | 133.06 | wind | 9 | 4320 | < th | dose independent | rect. | 17 | 4 |
| 557 | 133.09 | temperature | 25 | 720 | > th | dose dependent | rect. | 13 | 21 |
| 587 | 133.18 | temperature | 20 | 4320 | > th | dose dependent | rect. | 24 | 1 |
| 596 | 133.20 | humidity | 60 | 10 | > th | dose dependent | rect. | 11 | 12 |
| 609 | 133.23 | temperature | 30 | 10 | < th | dose dependent | sin | 21 | NA |
| 612 | 133.24 | temperature | 25 | 4320 | > th | dose independent | rect. | 19 | 9 |
| 618 | 133.25 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 639 | 133.31 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 669 | 133.42 | temperature | 20 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 672 | 133.44 | wind | 9 | 43200 | > th | dose dependent | rect. | 16 | 5 |
| 682 | 133.48 | temperature | 25 | 4320 | > th | dose independent | rect. | 19 | 13 |
| 683 | 133.48 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 14 |
| 734 | 133.60 | temperature | 25 | 4320 | > th | dose independent | sin | 11 | NA |
| 740 | 133.61 | temperature | 20 | 4320 | > th | dose dependent | rect. | 17 | 9 |
| 760 | 133.66 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 10 |
| 761 | 133.66 | radiation | 1 | 43200 | < th | dose dependent | rect. | 24 | 4 |
| 767 | 133.69 | temperature | 25 | 4320 | < th | dose independent | sin | 10 | NA |
| 774 | 133.70 | wind | 9 | 4320 | > th | dose independent | rect. | 17 | 7 |
| 793 | 133.71 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 19 |
| 811 | 133.74 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 16 |
| 836 | 133.78 | temperature | 25 | 4320 | > th | dose independent | rect. | 19 | 18 |
| 842 | 133.79 | wind | 7 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 848 | 133.80 | temperature | 20 | 4320 | > th | dose dependent | rect. | 17 | 5 |
| 872 | 133.84 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 2 |
| 893 | 133.88 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 7 |
| 903 | 133.89 | temperature | 25 | 4320 | < th | dose independent | rect. | 17 | 13 |