Os01g0324200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0324200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 32.61 | 0.268 | 9.47 | -0.397 | 0.258 | -0.332 | 0.157 | -0.702 | 0.161 | 4.76 | 22.39 | 2202 | -- | -- |
| 34.13 | 0.272 | 9.49 | -0.555 | 0.255 | -0.281 | 0.28 | -- | 0.132 | 4.01 | 22.6 | 2220 | -- | -- |
| 32.67 | 0.266 | 9.47 | -0.392 | 0.258 | -0.324 | -- | -0.701 | 0.161 | 4.73 | 22.43 | 2203 | -- | -- |
| 33.86 | 0.271 | 9.5 | -0.607 | 0.261 | -0.303 | -- | -- | 0.0967 | 4.42 | 22.4 | 2221 | -- | -- |
| 36 | 0.279 | 9.48 | -0.392 | -- | -0.345 | -- | -0.705 | 0.16 | -- | 22.41 | 2388 | -- | -- |
| 37.73 | 0.288 | 9.47 | -0.509 | 0.265 | -- | 0.128 | -- | 0.219 | 4.29 | -- | -- | -- | -- |
| 37.77 | 0.288 | 9.47 | -0.511 | 0.265 | -- | -- | -- | 0.218 | 4.29 | -- | -- | -- | -- |
| 37.07 | 0.284 | 9.5 | -0.645 | -- | -0.342 | -- | -- | 0.0943 | -- | 22.6 | 2483 | -- | -- |
| 43.49 | 0.307 | 9.47 | -- | 0.248 | -0.166 | -- | -- | 0.223 | 4.5 | 22.6 | 2219 | -- | -- |
| 41.57 | 0.301 | 9.48 | -0.5 | -- | -- | -- | -- | 0.225 | -- | -- | -- | -- | -- |
| 44.64 | 0.313 | 9.46 | -- | 0.256 | -- | -- | -- | 0.275 | 4.33 | -- | -- | -- | -- |
| 46.77 | 0.319 | 9.48 | -- | -- | -0.181 | -- | -- | 0.221 | -- | 22.54 | 2352 | -- | -- |
| 48.17 | 0.324 | 9.46 | -- | -- | -- | -- | -- | 0.281 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 32.62 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 23 | 4 |
| 4 | 32.76 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 5 | 32.77 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 1 | 2 |
| 12 | 32.83 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 1 | 4 |
| 15 | 32.87 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 22 | 3 |
| 18 | 32.88 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 41 | 33.04 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 51 | 33.08 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 52 | 33.08 | wind | 3.0 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 59 | 33.15 | wind | 3.0 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 74 | 33.20 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 2 | 5 |
| 81 | 33.24 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 5 | 2 |
| 87 | 33.27 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 105 | 33.36 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 2 | 2 |
| 107 | 33.36 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 125 | 33.43 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 139 | 33.48 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 3 |
| 156 | 33.52 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 5 | 2 |
| 192 | 33.56 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 23 | 2 |
| 195 | 33.56 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 23 | 2 |
| 207 | 33.58 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 2 | 2 |
| 211 | 33.59 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 7 |
| 230 | 33.61 | wind | 9.0 | 14400 | > th | dose independent | rect. | 10 | 2 |
| 264 | 33.63 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 9 | 4 |
| 271 | 33.64 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 277 | 33.64 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 22 | 1 |
| 285 | 33.65 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 20 | 1 |
| 305 | 33.67 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 307 | 33.67 | wind | 9.0 | 14400 | > th | dose independent | rect. | 6 | 7 |
| 308 | 33.67 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 391 | 33.75 | wind | 9.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 396 | 33.75 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 11 | 2 |
| 505 | 33.83 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 7 |
| 591 | 33.89 | wind | 3.0 | 1440 | < th | dose independent | rect. | 2 | 1 |
| 604 | 33.90 | wind | 3.0 | 1440 | > th | dose independent | rect. | 2 | 1 |
| 609 | 33.90 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 617 | 33.90 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 19 | 13 |
| 633 | 33.91 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 14 | 16 |
| 635 | 33.92 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 16 | 14 |
| 649 | 33.92 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 11 | 19 |
| 696 | 33.95 | temperature | 25.0 | 4320 | < th | dose dependent | sin | 13 | NA |
| 745 | 33.97 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 770 | 33.98 | wind | 1.0 | 14400 | < th | dose independent | rect. | 1 | 1 |
| 771 | 33.98 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 779 | 33.98 | wind | 7.0 | 1440 | < th | dose independent | rect. | 21 | 12 |
| 888 | 34.01 | temperature | 20.0 | 1440 | > th | dose dependent | sin | 11 | NA |
| 963 | 34.03 | wind | 9.0 | 14400 | < th | dose independent | rect. | 1 | 13 |