Os01g0319200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF247, plant family protein.
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Os01g0319200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF247, plant family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 382.93 | 0.919 | 3.34 | -1.4 | 0.00249 | 4.86 | 1.02 | -23 | -0.229 | 16.3 | 999.9 | 261 | -- | -- |
| 392.86 | 0.93 | 3.09 | 0.0198 | 0.0185 | 0.628 | -0.957 | -- | -0.235 | 4.57 | 999.9 | 261 | -- | -- |
| 385.78 | 0.915 | 3.34 | -1.39 | 0.0277 | 4.89 | -- | -23.1 | -0.226 | 12.1 | 999.9 | 261 | -- | -- |
| 392.11 | 0.922 | 3.08 | 0.00967 | 0.00983 | 0.783 | -- | -- | -0.225 | 4.49 | 999.9 | 261 | -- | -- |
| 385.81 | 0.915 | 3.33 | -1.34 | -- | 4.73 | -- | -22.2 | -0.224 | -- | 999.8 | 261 | -- | -- |
| 403.69 | 0.942 | 3.1 | 0.131 | 0.00496 | -- | -0.997 | -- | -0.277 | 4.47 | -- | -- | -- | -- |
| 406.37 | 0.944 | 3.09 | 0.139 | 0.00849 | -- | -- | -- | -0.272 | 10.8 | -- | -- | -- | -- |
| 392.11 | 0.922 | 3.08 | 0.0103 | -- | 0.782 | -- | -- | -0.224 | -- | 999.9 | 261 | -- | -- |
| 392.1 | 0.922 | 3.08 | -- | 0.0163 | 0.785 | -- | -- | -0.225 | 7.63 | 999.8 | 261 | -- | -- |
| 406.38 | 0.942 | 3.09 | 0.139 | -- | -- | -- | -- | -0.272 | -- | -- | -- | -- | -- |
| 406.88 | 0.944 | 3.1 | -- | 0.0078 | -- | -- | -- | -0.288 | 9.59 | -- | -- | -- | -- |
| 392.12 | 0.922 | 3.08 | -- | -- | 0.784 | -- | -- | -0.225 | -- | 999.9 | 261 | -- | -- |
| 406.88 | 0.942 | 3.1 | -- | -- | -- | -- | -- | -0.288 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 372.47 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 1 | 8 |
| 11 | 374.02 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 24 | 9 |
| 28 | 375.76 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 24 | 3 |
| 32 | 376.36 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 16 | 16 |
| 33 | 376.59 | radiation | 30 | 10 | > th | dose independent | rect. | 8 | 1 |
| 36 | 376.64 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 24 | 2 |
| 63 | 377.17 | atmosphere | 1000 | 270 | < th | dose independent | rect. | 13 | 18 |
| 80 | 377.81 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 17 | 16 |
| 94 | 378.38 | humidity | 70 | 10 | < th | dose independent | rect. | 7 | 1 |
| 154 | 378.38 | humidity | 70 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 214 | 378.39 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 24 | 5 |
| 215 | 378.43 | wind | 7 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 217 | 378.47 | atmosphere | 1000 | 270 | < th | dose independent | sin | 12 | NA |
| 219 | 378.52 | wind | 7 | 90 | > th | dose independent | rect. | 8 | 1 |
| 241 | 378.88 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 1 | 5 |
| 247 | 379.05 | atmosphere | 1000 | 270 | > th | dose independent | sin | 12 | NA |
| 291 | 379.99 | atmosphere | 1010 | 270 | < th | dose dependent | rect. | 22 | 9 |
| 305 | 380.38 | atmosphere | 1005 | 10 | < th | dose dependent | rect. | 1 | 5 |
| 307 | 380.41 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 13 | 20 |
| 323 | 380.70 | humidity | 50 | 30 | < th | dose independent | sin | 12 | NA |
| 330 | 380.76 | humidity | 50 | 30 | < th | dose dependent | sin | 12 | NA |
| 360 | 380.90 | humidity | 50 | 10 | < th | dose independent | rect. | 14 | 4 |
| 385 | 380.93 | humidity | 50 | 90 | > th | dose independent | sin | 13 | NA |
| 427 | 381.21 | humidity | 50 | 10 | < th | dose independent | rect. | 14 | 2 |
| 437 | 381.27 | humidity | 50 | 10 | < th | dose dependent | rect. | 14 | 4 |
| 469 | 381.43 | humidity | 50 | 90 | < th | dose dependent | rect. | 13 | 3 |
| 501 | 381.68 | radiation | 20 | 10 | > th | dose dependent | rect. | 8 | 1 |
| 522 | 381.82 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 1 | 19 |
| 523 | 381.84 | atmosphere | 1000 | 720 | < th | dose independent | rect. | 19 | 7 |
| 525 | 381.85 | humidity | 50 | 90 | < th | dose dependent | rect. | 13 | 5 |
| 544 | 381.87 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 22 | 11 |
| 579 | 382.13 | temperature | 25 | 4320 | > th | dose dependent | rect. | 24 | 2 |
| 582 | 382.17 | atmosphere | 1000 | 270 | < th | dose independent | rect. | 22 | 21 |
| 598 | 382.28 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 17 | 22 |
| 630 | 382.44 | temperature | 30 | 90 | < th | dose independent | sin | 15 | NA |
| 655 | 382.56 | atmosphere | 1000 | 720 | > th | dose independent | rect. | 16 | 10 |
| 685 | 382.64 | temperature | 30 | 1440 | > th | dose independent | rect. | 10 | 1 |
| 738 | 382.79 | atmosphere | 1005 | 10 | < th | dose dependent | rect. | 17 | 16 |
| 754 | 382.87 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 22 | 11 |
| 755 | 382.87 | atmosphere | 1005 | 90 | < th | dose dependent | rect. | 16 | 16 |
| 802 | 382.94 | atmosphere | 1005 | 720 | < th | dose dependent | rect. | 16 | 11 |
| 835 | 382.98 | wind | 1 | 30 | < th | dose independent | rect. | 15 | 1 |
| 837 | 382.98 | wind | 1 | 30 | < th | dose dependent | rect. | 15 | 1 |
| 882 | 383.03 | temperature | 25 | 4320 | > th | dose independent | rect. | 1 | 1 |
| 968 | 383.23 | atmosphere | 1000 | 270 | < th | dose independent | no | NA | NA |
| 991 | 383.33 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 20 | 13 |
| 992 | 383.34 | atmosphere | 1000 | 270 | > th | dose independent | no | NA | NA |