Os01g0318700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to ABC1 protein (Fragment).
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Os01g0318700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to ABC1 protein (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 78.48 | 0.416 | 9.59 | -0.852 | 1.61 | 0.879 | 0.3 | 0.836 | -0.536 | 6.79 | 76 | 4021 | -- | -- |
| 79.24 | 0.415 | 9.59 | -0.882 | 1.63 | 0.969 | 0.281 | -- | -0.523 | 6.82 | 75.35 | 3941 | -- | -- |
| 78.67 | 0.413 | 9.59 | -0.855 | 1.62 | 0.889 | -- | 0.748 | -0.533 | 6.78 | 75.73 | 3968 | -- | -- |
| 79.4 | 0.415 | 9.59 | -0.873 | 1.63 | 0.972 | -- | -- | -0.521 | 6.8 | 75.37 | 3943 | -- | -- |
| 209.8 | 0.675 | 9.64 | -0.614 | -- | 0.957 | -- | 1.24 | -0.581 | -- | 75.94 | 7096 | -- | -- |
| 94.91 | 0.457 | 9.6 | -0.817 | 1.59 | -- | 0.191 | -- | -0.573 | 6.57 | -- | -- | -- | -- |
| 95 | 0.456 | 9.6 | -0.814 | 1.59 | -- | -- | -- | -0.574 | 6.56 | -- | -- | -- | -- |
| 212.38 | 0.679 | 9.66 | -0.655 | -- | 1.06 | -- | -- | -0.63 | -- | 77.91 | 7082 | -- | -- |
| 85.07 | 0.43 | 9.57 | -- | 1.57 | 1.24 | -- | -- | -0.43 | 6.64 | 68.21 | 25616 | -- | -- |
| 227.19 | 0.704 | 9.64 | -0.775 | -- | -- | -- | -- | -0.541 | -- | -- | -- | -- | -- |
| 112.47 | 0.496 | 9.58 | -- | 1.58 | -- | -- | -- | -0.483 | 6.59 | -- | -- | -- | -- |
| 215.26 | 0.683 | 9.58 | -- | -- | 1.22 | -- | -- | -0.36 | -- | 67.89 | 27147 | -- | -- |
| 243.04 | 0.728 | 9.62 | -- | -- | -- | -- | -- | -0.455 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 75.17 | wind | 1.0 | 14400 | > th | dose independent | rect. | 2 | 5 |
| 2 | 75.25 | wind | 1.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 4 | 75.57 | wind | 1.0 | 14400 | < th | dose independent | rect. | 2 | 5 |
| 6 | 75.74 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 12 | 1 |
| 13 | 76.17 | humidity | 60.0 | 4320 | < th | dose independent | rect. | 12 | 1 |
| 14 | 76.25 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 17 | 76.36 | wind | 1.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 25 | 76.78 | wind | 1.0 | 14400 | > th | dose independent | rect. | 2 | 8 |
| 36 | 77.02 | wind | 1.0 | 14400 | < th | dose independent | rect. | 2 | 8 |
| 47 | 77.51 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 5 | 2 |
| 49 | 77.54 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 5 |
| 55 | 77.75 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 2 |
| 66 | 77.91 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 17 | 20 |
| 109 | 78.38 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 6 | 11 |
| 110 | 78.38 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 6 | 11 |
| 121 | 78.45 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 6 | 11 |
| 132 | 78.52 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 7 | 3 |
| 141 | 78.63 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 23 | 14 |
| 188 | 78.75 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 191 | 78.77 | humidity | 70.0 | 1440 | > th | dose independent | sin | 9 | NA |
| 198 | 78.78 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 10 |
| 199 | 78.79 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 13 |
| 200 | 78.79 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 13 |
| 202 | 78.80 | humidity | 70.0 | 4320 | < th | dose dependent | rect. | 12 | 2 |
| 204 | 78.81 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 18 | 19 |
| 288 | 79.03 | wind | 3.0 | 43200 | < th | dose independent | rect. | 4 | 8 |
| 365 | 79.18 | wind | 1.0 | 43200 | < th | dose independent | rect. | 1 | 12 |
| 392 | 79.21 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 6 | 7 |
| 432 | 79.24 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 1 | 12 |
| 433 | 79.25 | wind | 1.0 | 14400 | > th | dose independent | rect. | 2 | 1 |
| 438 | 79.26 | wind | 9.0 | 43200 | < th | dose dependent | sin | 5 | NA |
| 439 | 79.26 | wind | 5.0 | 43200 | < th | dose dependent | sin | 6 | NA |
| 448 | 79.28 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 4 | 10 |
| 449 | 79.28 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 1 | 13 |
| 466 | 79.31 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 24 | 5 |
| 468 | 79.31 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 3 | 11 |
| 474 | 79.33 | temperature | 30.0 | 270 | < th | dose independent | rect. | 5 | 20 |
| 523 | 79.37 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 1 | 14 |
| 545 | 79.42 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 549 | 79.42 | wind | 1.0 | 43200 | > th | dose dependent | sin | 5 | NA |
| 551 | 79.42 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 4 | 10 |
| 571 | 79.44 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 6 | 11 |
| 572 | 79.44 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 20 | 12 |
| 581 | 79.46 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 5 |
| 596 | 79.48 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 14 |
| 608 | 79.50 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 8 | 8 |
| 627 | 79.50 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 10 | 3 |
| 677 | 79.54 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 23 | 20 |
| 685 | 79.55 | wind | 3.0 | 43200 | > th | dose independent | sin | 5 | NA |
| 690 | 79.55 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 7 | 12 |
| 691 | 79.55 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 2 | 17 |
| 702 | 79.56 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 0 | NA |
| 712 | 79.56 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 0 | NA |
| 744 | 79.60 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 8 | 5 |
| 745 | 79.60 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 7 | 7 |
| 748 | 79.61 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 0 | NA |
| 756 | 79.61 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 8 |
| 769 | 79.62 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 20 | 12 |
| 783 | 79.64 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 19 |
| 802 | 79.65 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 10 | 4 |
| 818 | 79.67 | humidity | 60.0 | 14400 | > th | dose independent | sin | 2 | NA |
| 833 | 79.67 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 6 | 8 |
| 834 | 79.67 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 1 | 9 |
| 870 | 79.70 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 15 | 2 |
| 929 | 79.72 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 933 | 79.73 | humidity | 70.0 | 1440 | < th | dose independent | sin | 5 | NA |
| 937 | 79.73 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 15 | 18 |
| 938 | 79.73 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 20 | 20 |
| 945 | 79.74 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 965 | 79.74 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 24 | 16 |
| 970 | 79.74 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 22 | 18 |
| 979 | 79.74 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 24 | 1 |
| 984 | 79.74 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 20 | 10 |
| 989 | 79.75 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 11 | 17 |
| 997 | 79.76 | wind | 9.0 | 43200 | < th | dose independent | rect. | 9 | 6 |