Os01g0317800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Alpha/beta hydrolase family protein.
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Os01g0317800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Alpha/beta hydrolase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 64.84 | 0.378 | 12.9 | 2.25 | 2.26 | 1.51 | -0.854 | -1.59 | 0.421 | 15.4 | 30.16 | 234 | -- | -- |
| 67.17 | 0.382 | 12.9 | 2.01 | 2.26 | 1.61 | -0.476 | -- | 0.407 | 15.4 | 29.4 | 236 | -- | -- |
| 66.61 | 0.38 | 12.9 | 2.15 | 2.29 | 1.57 | -- | -0.936 | 0.391 | 15.3 | 30.41 | 212 | -- | -- |
| 67.37 | 0.382 | 12.9 | 1.96 | 2.3 | 1.54 | -- | -- | 0.352 | 15.3 | 29.8 | 174 | -- | -- |
| 221.77 | 0.694 | 12.8 | 2.37 | -- | 1.95 | -- | -1.3 | 0.508 | -- | 28.17 | 1102 | -- | -- |
| 97.73 | 0.463 | 13 | 1.59 | 1.81 | -- | -0.566 | -- | 0.05 | 15.2 | -- | -- | -- | -- |
| 98.78 | 0.465 | 13 | 1.58 | 1.81 | -- | -- | -- | 0.0466 | 15.2 | -- | -- | -- | -- |
| 223.56 | 0.696 | 12.9 | 2.11 | -- | 2.01 | -- | -- | 0.465 | -- | 27.7 | 1090 | -- | -- |
| 157.39 | 0.587 | 13 | -- | 2.01 | 0.827 | -- | -- | -0.031 | 15.1 | 60.91 | 91 | -- | -- |
| 285.35 | 0.789 | 13 | 1.5 | -- | -- | -- | -- | -0.000708 | -- | -- | -- | -- | -- |
| 164.64 | 0.6 | 13 | -- | 1.78 | -- | -- | -- | -0.129 | 15.2 | -- | -- | -- | -- |
| 319.5 | 0.835 | 13 | -- | -- | -1.08 | -- | -- | -0.348 | -- | 29.33 | 1098 | -- | -- |
| 345 | 0.867 | 13 | -- | -- | -- | -- | -- | -0.168 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 58.28 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 20 |
| 3 | 59.72 | temperature | 30 | 270 | < th | dose dependent | rect. | 2 | 22 |
| 4 | 59.97 | temperature | 30 | 90 | < th | dose dependent | rect. | 4 | 23 |
| 9 | 60.44 | temperature | 15 | 90 | > th | dose dependent | rect. | 7 | 23 |
| 52 | 64.18 | temperature | 30 | 270 | < th | dose dependent | rect. | 18 | 23 |
| 58 | 64.50 | temperature | 15 | 90 | > th | dose dependent | rect. | 24 | 23 |
| 63 | 64.88 | temperature | 10 | 720 | > th | dose dependent | rect. | 16 | 20 |
| 66 | 64.96 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 12 |
| 67 | 64.99 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 100 | 65.66 | temperature | 10 | 90 | > th | dose dependent | no | NA | NA |
| 104 | 65.70 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 13 |
| 108 | 65.76 | temperature | 30 | 1440 | < th | dose dependent | rect. | 8 | 1 |
| 109 | 65.76 | temperature | 15 | 270 | > th | dose dependent | rect. | 15 | 23 |
| 110 | 65.77 | temperature | 15 | 1440 | > th | dose dependent | rect. | 8 | 1 |
| 120 | 65.93 | temperature | 10 | 270 | > th | dose dependent | rect. | 7 | 13 |
| 130 | 66.11 | temperature | 10 | 720 | > th | dose dependent | rect. | 7 | 5 |
| 140 | 66.22 | temperature | 15 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 142 | 66.25 | temperature | 30 | 1440 | < th | dose dependent | rect. | 7 | 3 |
| 175 | 66.57 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 23 |
| 183 | 66.62 | temperature | 30 | 270 | < th | dose dependent | rect. | 11 | 23 |
| 214 | 66.93 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 20 |
| 249 | 67.21 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 265 | 67.31 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 317 | 67.45 | temperature | 30 | 1440 | < th | dose dependent | rect. | 19 | 16 |
| 363 | 67.59 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 10 |
| 429 | 67.80 | temperature | 10 | 1440 | > th | dose dependent | sin | 7 | NA |
| 526 | 68.06 | temperature | 30 | 1440 | < th | dose dependent | sin | 7 | NA |
| 591 | 68.23 | wind | 9 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 643 | 68.36 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 3 |
| 681 | 68.46 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 4 |
| 687 | 68.47 | temperature | 30 | 1440 | < th | dose dependent | rect. | 19 | 7 |
| 715 | 68.52 | temperature | 10 | 1440 | > th | dose dependent | rect. | 19 | 7 |
| 833 | 68.71 | wind | 9 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 945 | 68.86 | temperature | 30 | 1440 | < th | dose dependent | rect. | 6 | 22 |
| 953 | 68.87 | temperature | 15 | 10 | > th | dose dependent | rect. | 8 | 14 |
| 996 | 68.92 | temperature | 30 | 1440 | < th | dose dependent | no | NA | NA |