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Os01g0316800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to 26 proteasome complex subunit DSS1 (Deleted in split hand/split foot protein 1) (Split hand/foot deleted protein 1).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.6 (0.0169) R2 : 0.0872
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.234 (0.0355) R2dN8 : 0.113 R2N8 : 0.0872
σ : 0.317
deviance : 46.24
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
28.79 0.252 13.6 0.357 0.336 0.174 -0.195 -1.56 0.267 0.13 9.996 4384 -- --
31.29 0.261 13.6 0.406 0.34 0.182 -0.184 -- 0.27 0.0343 9.998 21025 -- --
28.75 0.25 13.6 0.368 0.338 0.186 -- -1.58 0.269 0.167 9.9 4576 -- --
31.17 0.26 13.6 0.394 0.353 0.184 -- -- 0.276 23.7 9.163 21059 -- --
31.74 0.264 13.6 0.404 -- 0.284 -- -0.344 0.255 -- 9.993 4654 -- --
32.8 0.268 13.6 0.441 0.347 -- -0.23 -- 0.279 0.145 -- -- -- --
33.02 0.269 13.6 0.45 0.348 -- -- -- 0.28 0.163 -- -- -- --
32.43 0.266 13.6 0.433 -- 0.283 -- -- 0.262 -- 9.97 24838 -- --
32.01 0.264 13.6 -- 0.319 0.444 -- -- 0.221 0.108 9.99 47520 -- --
40.64 0.298 13.6 0.461 -- -- -- -- 0.285 -- -- -- -- --
38.36 0.29 13.6 -- 0.354 -- -- -- 0.23 0.233 -- -- -- --
37.36 0.286 13.6 -- -- 0.294 -- -- 0.213 -- 9.97 24838 -- --
46.24 0.317 13.6 -- -- -- -- -- 0.234 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 26.73 humidity 90.0 14400 > th dose independent rect. 23 7
2 26.76 humidity 90.0 14400 > th dose independent rect. 23 5
7 26.98 wind 1.0 43200 > th dose independent rect. 21 1
8 27.03 humidity 90.0 14400 < th dose independent rect. 23 5
11 27.03 precipitation 0.1 43200 > th dose dependent rect. 18 1
12 27.05 precipitation 0.1 43200 > th dose independent rect. 17 2
13 27.07 humidity 90.0 14400 < th dose independent rect. 24 1
14 27.08 wind 1.0 43200 < th dose dependent rect. 19 3
15 27.09 wind 1.0 43200 < th dose independent rect. 21 1
17 27.11 precipitation 0.1 43200 < th dose independent rect. 17 2
18 27.11 wind 1.0 43200 < th dose independent rect. 19 3
19 27.11 precipitation 0.1 43200 < th dose dependent rect. 17 2
20 27.11 humidity 90.0 14400 > th dose dependent rect. 24 7
24 27.14 wind 1.0 43200 > th dose independent rect. 2 1
27 27.15 humidity 90.0 14400 > th dose dependent rect. 2 5
29 27.17 humidity 90.0 14400 < th dose independent rect. 23 7
39 27.21 humidity 90.0 14400 > th dose dependent rect. 24 3
49 27.28 humidity 50.0 43200 > th dose independent rect. 8 1
71 27.41 wind 1.0 43200 > th dose independent rect. 19 1
81 27.44 precipitation 0.1 43200 > th dose dependent rect. 18 4
82 27.45 wind 1.0 43200 < th dose independent rect. 19 1
84 27.45 precipitation 0.1 43200 > th dose independent rect. 17 5
92 27.47 precipitation 0.1 43200 < th dose independent rect. 17 5
93 27.47 precipitation 0.1 43200 < th dose dependent rect. 17 5
99 27.48 radiation 20.0 14400 > th dose dependent rect. 7 1
103 27.49 wind 1.0 43200 > th dose independent rect. 19 3
106 27.50 wind 1.0 43200 > th dose independent rect. 9 2
107 27.50 wind 1.0 43200 > th dose independent rect. 23 2
127 27.52 precipitation 0.1 43200 > th dose dependent rect. 20 2
133 27.53 precipitation 0.1 43200 > th dose dependent rect. 14 5
136 27.53 radiation 1.0 4320 < th dose dependent rect. 18 11
145 27.57 humidity 50.0 43200 < th dose independent rect. 8 1
146 27.57 precipitation 0.1 43200 > th dose independent rect. 20 2
150 27.58 precipitation 0.1 43200 < th dose independent rect. 20 2
154 27.58 precipitation 0.1 43200 < th dose dependent rect. 20 2
169 27.62 radiation 1.0 4320 < th dose dependent rect. 18 3
172 27.63 radiation 1.0 4320 < th dose dependent rect. 18 1
175 27.63 radiation 1.0 4320 < th dose dependent rect. 18 7
188 27.64 precipitation 0.1 43200 > th dose dependent rect. 14 8
198 27.66 radiation 1.0 14400 < th dose dependent rect. 23 6
204 27.67 radiation 1.0 4320 < th dose dependent rect. 4 1
211 27.67 precipitation 0.1 43200 > th dose dependent rect. 12 7
213 27.68 wind 1.0 43200 < th dose independent rect. 2 1
228 27.71 humidity 90.0 14400 > th dose independent rect. 5 1
248 27.72 radiation 20.0 43200 < th dose independent rect. 18 12
256 27.73 radiation 20.0 43200 > th dose independent rect. 9 1
271 27.73 precipitation 0.1 43200 > th dose dependent rect. 12 10
273 27.74 humidity 70.0 43200 > th dose independent rect. 9 2
307 27.76 humidity 70.0 43200 < th dose independent rect. 10 1
314 27.77 radiation 30.0 14400 < th dose independent rect. 7 1
317 27.77 humidity 50.0 43200 > th dose independent rect. 18 15
332 27.78 radiation 30.0 14400 < th dose independent rect. 22 10
336 27.78 radiation 30.0 14400 < th dose independent rect. 18 14
349 27.79 radiation 10.0 43200 < th dose dependent rect. 13 1
356 27.80 precipitation 0.1 43200 > th dose dependent rect. 16 1
364 27.81 humidity 50.0 43200 > th dose independent rect. 21 12
375 27.82 humidity 50.0 43200 > th dose independent rect. 2 7
395 27.83 wind 1.0 43200 > th dose independent rect. 19 7
413 27.83 radiation 1.0 4320 < th dose dependent rect. 18 15
423 27.85 radiation 1.0 43200 < th dose independent rect. 20 9
442 27.86 wind 1.0 43200 > th dose independent rect. 21 4
443 27.86 radiation 20.0 43200 > th dose independent rect. 8 4
470 27.87 wind 1.0 43200 < th dose independent rect. 9 2
471 27.87 humidity 70.0 43200 > th dose independent rect. 18 3
473 27.87 radiation 10.0 43200 > th dose independent rect. 5 4
503 27.87 radiation 40.0 43200 < th dose dependent rect. 9 1
512 27.88 radiation 10.0 43200 < th dose independent rect. 18 3
513 27.88 radiation 1.0 43200 < th dose independent rect. 24 5
514 27.88 radiation 10.0 43200 < th dose independent rect. 18 7
515 27.88 radiation 1.0 43200 < th dose independent rect. 22 7
563 27.90 radiation 1.0 43200 < th dose independent rect. 4 1
564 27.90 radiation 10.0 43200 < th dose independent rect. 18 1
630 27.92 radiation 1.0 43200 > th dose independent rect. 4 1
665 27.92 radiation 1.0 43200 > th dose dependent rect. 4 1
683 27.92 radiation 30.0 43200 < th dose dependent rect. 19 10
687 27.93 wind 3.0 43200 > th dose independent rect. 13 1
688 27.93 humidity 80.0 43200 > th dose independent rect. 20 1
690 27.93 radiation 10.0 43200 < th dose independent rect. 13 1
704 27.93 radiation 1.0 43200 > th dose dependent rect. 9 1
750 27.95 radiation 20.0 43200 > th dose independent sin 8 NA
752 27.95 humidity 70.0 43200 < th dose independent rect. 18 3
814 27.96 wind 1.0 14400 < th dose dependent rect. 22 3
824 27.97 radiation 10.0 43200 < th dose independent rect. 10 1
842 27.97 wind 9.0 43200 > th dose dependent rect. 18 2
863 27.98 radiation 10.0 14400 < th dose independent rect. 5 9
877 27.99 radiation 30.0 14400 > th dose independent rect. 7 1
890 27.99 wind 1.0 43200 < th dose independent rect. 19 7
918 27.99 humidity 90.0 14400 > th dose dependent sin 9 NA
934 28.00 temperature 15.0 43200 < th dose independent rect. 6 1
935 28.00 atmosphere 1005.0 43200 < th dose independent rect. 9 1
965 28.00 humidity 50.0 43200 < th dose independent rect. 18 15
973 28.00 radiation 10.0 14400 < th dose independent rect. 17 21
986 28.00 humidity 60.0 43200 < th dose dependent rect. 18 15