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Os01g0316500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.3 (0.015) R2 : 0.000795
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0191 (0.0316) R2dN8 : 0.00103 R2N8 : 0.000795
σ : 0.283
deviance : 36.74
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
14.26 0.177 11.3 -0.558 0.555 0.657 -0.00669 0.201 -0.162 6.39 10.89 10 -- --
14.25 0.177 11.3 -0.584 0.552 0.665 -0.0251 -- -0.169 6.38 10.89 10 -- --
14.21 0.177 11.3 -0.555 0.553 0.662 -- 0.214 -0.161 6.38 10.89 10 -- --
14.25 0.177 11.3 -0.584 0.552 0.666 -- -- -0.169 6.38 10.44 6 -- --
29.08 0.253 11.3 -0.518 -- 0.402 -- 0.0366 -0.121 -- 10.89 10 -- --
18.42 0.201 11.3 -0.456 0.49 -- -0.0378 -- -0.0763 7.68 -- -- -- --
18.43 0.201 11.3 -0.457 0.49 -- -- -- -0.0762 7.69 -- -- -- --
29.07 0.251 11.3 -0.523 -- 0.4 -- -- -0.123 -- 13.08 2 -- --
22.41 0.222 11.3 -- 0.512 0.383 -- -- -0.0703 6.96 10.44 6 -- --
31.38 0.262 11.3 -0.451 -- -- -- -- -0.0691 -- -- -- -- --
23.94 0.229 11.3 -- 0.487 -- -- -- -0.0253 7.76 -- -- -- --
35.88 0.28 11.3 -- -- 0.239 -- -- -0.0458 -- 10.44 6 -- --
36.74 0.283 11.3 -- -- -- -- -- -0.0191 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 12.92 wind 3 14400 > th dose independent rect. 1 2
3 13.11 wind 3 14400 < th dose independent rect. 1 2
6 13.31 wind 3 14400 > th dose independent rect. 1 6
7 13.38 wind 3 14400 < th dose independent rect. 1 6
11 13.46 wind 3 14400 > th dose independent rect. 23 8
13 13.49 wind 3 14400 > th dose independent rect. 5 1
18 13.53 wind 3 14400 < th dose independent rect. 23 8
21 13.54 wind 3 14400 < th dose independent rect. 5 1
23 13.54 wind 7 14400 < th dose dependent rect. 1 1
27 13.55 wind 1 14400 > th dose dependent rect. 1 1
54 13.78 temperature 15 90 > th dose dependent rect. 18 23
69 13.85 temperature 25 10 < th dose dependent sin 19 NA
102 13.97 wind 9 14400 < th dose independent rect. 4 9
103 13.97 wind 9 14400 < th dose independent rect. 2 11
115 14.00 wind 1 14400 > th dose dependent rect. 5 2
136 14.04 wind 5 14400 < th dose dependent rect. 5 2
138 14.05 wind 3 14400 > th dose independent sin 7 NA
139 14.05 wind 3 14400 < th dose independent sin 7 NA
188 14.14 wind 1 14400 > th dose dependent rect. 1 6
189 14.14 wind 1 14400 > th dose dependent rect. 23 8
204 14.17 temperature 25 90 < th dose dependent rect. 6 23
214 14.20 wind 9 14400 < th dose dependent rect. 22 9
216 14.20 temperature 25 10 < th dose dependent rect. 6 23
229 14.22 wind 5 14400 < th dose dependent rect. 1 6
252 14.26 temperature 10 10 > th dose dependent no NA NA
286 14.30 temperature 30 90 < th dose dependent rect. 23 22
287 14.30 temperature 15 10 > th dose dependent rect. 3 23
292 14.31 wind 9 14400 > th dose independent rect. 4 9
296 14.31 temperature 30 10 < th dose dependent rect. 23 23
340 14.39 wind 9 14400 > th dose independent rect. 5 7
370 14.41 temperature 30 10 < th dose dependent rect. 13 23
381 14.42 temperature 20 10 > th dose dependent rect. 6 20
383 14.42 temperature 25 10 < th dose dependent rect. 1 23
384 14.43 wind 9 14400 < th dose independent rect. 10 3
408 14.44 temperature 20 10 > th dose dependent rect. 6 23
443 14.48 temperature 25 30 < th dose dependent no NA NA
448 14.48 temperature 25 30 < th dose dependent rect. 9 23
449 14.48 temperature 25 30 < th dose dependent rect. 11 23
450 14.48 temperature 25 30 < th dose dependent rect. 15 23
459 14.49 temperature 25 30 < th dose dependent rect. 17 23
473 14.50 temperature 25 30 < th dose dependent rect. 19 23
474 14.50 temperature 25 30 < th dose dependent rect. 21 23
481 14.51 wind 5 43200 < th dose dependent rect. 23 4
486 14.51 temperature 25 30 < th dose dependent rect. 3 23
495 14.52 temperature 20 10 > th dose dependent rect. 6 18
505 14.53 humidity 90 14400 < th dose dependent rect. 3 2
518 14.54 wind 9 14400 > th dose dependent rect. 12 1
542 14.56 wind 3 14400 < th dose dependent rect. 22 15
561 14.58 wind 3 14400 < th dose dependent rect. 4 9
583 14.60 wind 9 14400 > th dose independent rect. 10 2
611 14.61 wind 9 14400 > th dose dependent rect. 4 9
651 14.64 wind 1 43200 > th dose dependent rect. 23 3
656 14.64 wind 3 14400 < th dose dependent rect. 1 12
679 14.65 temperature 10 270 > th dose dependent rect. 9 14
681 14.65 temperature 25 90 < th dose dependent rect. 7 16
713 14.67 wind 5 14400 < th dose dependent sin 7 NA
728 14.67 temperature 15 10 > th dose dependent rect. 1 23
811 14.71 temperature 20 10 > th dose dependent rect. 21 19
861 14.74 wind 9 14400 < th dose independent sin 5 NA
893 14.75 humidity 70 1440 > th dose dependent rect. 7 5
951 14.78 humidity 80 14400 > th dose independent rect. 6 1
995 14.80 humidity 80 14400 < th dose independent rect. 6 1