Os01g0314300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Uncharacterized domain 2 containing protein.
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Os01g0314300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Uncharacterized domain 2 containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 15.15 | 0.183 | 11.7 | -0.996 | 0.202 | -0.759 | 0.489 | 1.47 | -0.249 | 12.4 | 29.68 | 1349 | -- | -- |
| 16.96 | 0.192 | 11.7 | -0.856 | 0.174 | -0.807 | 0.522 | -- | -0.194 | 11.9 | 23.66 | 4440 | -- | -- |
| 15.72 | 0.185 | 11.7 | -0.995 | 0.284 | -0.779 | -- | 1.67 | -0.239 | 11.3 | 30.63 | 1087 | -- | -- |
| 18.05 | 0.198 | 11.7 | -0.839 | 0.176 | -0.807 | -- | -- | -0.196 | 11.2 | 23.59 | 4399 | -- | -- |
| 18.39 | 0.2 | 11.7 | -1.03 | -- | -0.732 | -- | 1.64 | -0.262 | -- | 29.5 | 1476 | -- | -- |
| 27.01 | 0.244 | 11.6 | -0.433 | 0.157 | -- | 0.555 | -- | 0.00654 | 12.5 | -- | -- | -- | -- |
| 28.02 | 0.248 | 11.6 | -0.413 | 0.172 | -- | -- | -- | 0.00767 | 10.7 | -- | -- | -- | -- |
| 20.01 | 0.208 | 11.7 | -0.847 | -- | -0.817 | -- | -- | -0.199 | -- | 23.38 | 4475 | -- | -- |
| 28.01 | 0.247 | 11.6 | -- | 0.252 | -0.539 | -- | -- | -0.0705 | 11.1 | 26.87 | 1027 | -- | -- |
| 29.85 | 0.255 | 11.6 | -0.417 | -- | -- | -- | -- | 0.00667 | -- | -- | -- | -- | -- |
| 32.52 | 0.267 | 11.6 | -- | 0.175 | -- | -- | -- | 0.0537 | 10.9 | -- | -- | -- | -- |
| 28.97 | 0.251 | 11.6 | -- | -- | -0.597 | -- | -- | -0.0146 | -- | 35.68 | 1546 | -- | -- |
| 34.43 | 0.274 | 11.6 | -- | -- | -- | -- | -- | 0.0529 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 14.99 | temperature | 30 | 1440 | < th | dose dependent | sin | 15 | NA |
| 2 | 14.99 | temperature | 30 | 1440 | < th | dose dependent | rect. | 13 | 18 |
| 4 | 15.00 | temperature | 30 | 1440 | < th | dose dependent | rect. | 14 | 13 |
| 9 | 15.01 | temperature | 30 | 1440 | < th | dose dependent | rect. | 15 | 11 |
| 48 | 15.08 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 7 |
| 51 | 15.08 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 20 |
| 61 | 15.11 | temperature | 10 | 1440 | > th | dose dependent | sin | 14 | NA |
| 71 | 15.12 | temperature | 10 | 1440 | > th | dose dependent | rect. | 14 | 17 |
| 82 | 15.14 | temperature | 10 | 1440 | > th | dose dependent | rect. | 15 | 12 |
| 97 | 15.15 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 3 |
| 98 | 15.15 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 8 |
| 99 | 15.15 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 10 |
| 111 | 15.16 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 3 |
| 112 | 15.16 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 6 |
| 166 | 15.19 | temperature | 30 | 1440 | < th | dose dependent | no | NA | NA |
| 186 | 15.19 | temperature | 30 | 1440 | < th | dose dependent | rect. | 4 | 22 |
| 188 | 15.19 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 23 |
| 217 | 15.20 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 436 | 15.31 | temperature | 10 | 1440 | > th | dose dependent | no | NA | NA |
| 457 | 15.31 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 23 |
| 479 | 15.32 | temperature | 10 | 1440 | > th | dose dependent | rect. | 4 | 23 |
| 484 | 15.32 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 511 | 15.33 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 23 |