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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0312800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to CEL4=CELLULASE 4 (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.83 (0.0165) R2 : 0.0237
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.115 (0.0347) R2dN8 : 0.0305 R2N8 : 0.0237
σ : 0.31
deviance : 44.11
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
42.37 0.306 2.83 0.0379 0.08 -0.186 -0.2 0.108 0.116 5.94 1010 20 -- --
42.41 0.303 2.83 0.0305 0.0815 -0.189 -0.202 -- 0.115 6.02 1010 22 -- --
42.43 0.303 2.83 0.0422 0.0814 -0.185 -- 0.12 0.119 7.12 1010 22 -- --
42.48 0.304 2.83 0.0302 0.0839 -0.188 -- -- 0.117 7.09 1010 22 -- --
42.79 0.305 2.83 0.0382 -- -0.196 -- 0.125 0.122 -- 1010 22 -- --
43.48 0.309 2.83 0.0213 0.102 -- -0.184 -- 0.115 6.65 -- -- -- --
43.54 0.309 2.83 0.0192 0.103 -- -- -- 0.116 7.47 -- -- -- --
42.82 0.305 2.84 0.0254 -- -0.188 -- -- 0.106 -- 1010 24 -- --
42.5 0.304 2.83 -- 0.0838 -0.187 -- -- 0.113 7.08 1010 22 -- --
44.1 0.31 2.83 0.0208 -- -- -- -- 0.117 -- -- -- -- --
43.55 0.309 2.83 -- 0.103 -- -- -- 0.114 7.45 -- -- -- --
42.84 0.305 2.84 -- -- -0.19 -- -- 0.103 -- 1010 24 -- --
44.11 0.31 2.83 -- -- -- -- -- 0.115 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 38.70 radiation 10.0 10 > th dose independent rect. 6 1
27 38.70 radiation 10.0 10 > th dose dependent rect. 6 1
57 40.36 temperature 25.0 10 > th dose independent rect. 4 3
61 40.78 wind 3.0 10 < th dose dependent rect. 6 1
63 40.89 atmosphere 1005.0 10 > th dose dependent rect. 6 1
69 41.02 wind 1.0 10 < th dose independent rect. 6 1
71 41.14 temperature 25.0 10 > th dose independent rect. 22 9
74 41.17 humidity 80.0 30 > th dose dependent rect. 6 1
76 41.25 atmosphere 1005.0 30 > th dose dependent rect. 4 3
77 41.27 radiation 10.0 10 < th dose dependent rect. 6 1
78 41.28 temperature 25.0 10 > th dose independent rect. 4 1
81 41.29 temperature 25.0 90 > th dose dependent rect. 4 1
88 41.35 humidity 90.0 10 < th dose independent rect. 4 1
91 41.36 temperature 30.0 30 < th dose dependent rect. 6 1
108 41.41 wind 1.0 30 > th dose independent rect. 4 1
109 41.43 wind 1.0 30 > th dose dependent rect. 4 1
113 41.50 atmosphere 1005.0 270 > th dose dependent rect. 3 2
115 41.53 temperature 20.0 30 > th dose dependent rect. 4 3
117 41.56 atmosphere 1010.0 10 < th dose independent sin 6 NA
122 41.59 atmosphere 1005.0 30 > th dose dependent rect. 4 1
184 41.93 atmosphere 1010.0 10 < th dose independent rect. 24 11
191 41.96 wind 7.0 1440 < th dose independent rect. 5 1
193 41.96 temperature 10.0 1440 > th dose independent rect. 5 1
196 41.96 temperature 30.0 1440 < th dose independent rect. 5 1
200 41.96 humidity 50.0 1440 > th dose independent rect. 5 1
209 41.96 atmosphere 995.0 1440 > th dose independent rect. 5 1
210 41.96 atmosphere 1015.0 1440 < th dose independent rect. 5 1
211 41.96 radiation 20.0 1440 < th dose independent rect. 5 1
221 41.96 temperature 10.0 1440 > th dose independent rect. 6 23
232 41.98 wind 3.0 30 < th dose independent rect. 4 1
235 41.98 atmosphere 1005.0 30 > th dose independent rect. 4 1
238 41.99 temperature 10.0 30 > th dose independent rect. 4 1
241 41.99 temperature 30.0 30 < th dose independent rect. 4 1
242 41.99 humidity 50.0 30 > th dose independent rect. 4 1
246 41.99 atmosphere 995.0 30 > th dose independent rect. 4 1
248 41.99 atmosphere 1010.0 30 < th dose independent rect. 4 1
250 41.99 radiation 1.0 30 < th dose independent rect. 4 1
255 41.99 precipitation 0.1 30 < th dose independent rect. 4 1
258 41.99 temperature 10.0 30 > th dose independent rect. 5 23
260 41.99 radiation 1.0 30 < th dose dependent rect. 4 1
266 41.99 precipitation 0.1 30 < th dose dependent rect. 4 1
274 42.01 atmosphere 1010.0 10 < th dose independent rect. 23 23
280 42.02 wind 9.0 1440 < th dose independent rect. 7 1
281 42.02 temperature 25.0 10 > th dose independent rect. 6 1
282 42.02 temperature 10.0 30 > th dose independent rect. 6 1
285 42.02 temperature 10.0 1440 > th dose independent rect. 7 1
289 42.02 temperature 30.0 30 < th dose independent rect. 6 1
290 42.02 temperature 30.0 1440 < th dose independent rect. 7 1
294 42.02 humidity 50.0 30 > th dose independent rect. 6 1
298 42.02 humidity 50.0 1440 > th dose independent rect. 7 1
303 42.02 atmosphere 995.0 30 > th dose independent rect. 6 1
306 42.02 atmosphere 995.0 1440 > th dose independent rect. 7 1
307 42.02 atmosphere 1015.0 30 < th dose independent rect. 6 1
308 42.02 atmosphere 1015.0 1440 < th dose independent rect. 7 1
309 42.02 radiation 20.0 30 < th dose independent rect. 6 1
312 42.02 precipitation 0.1 30 < th dose independent rect. 6 1
315 42.02 temperature 10.0 30 > th dose independent rect. 7 23
316 42.02 temperature 10.0 1440 > th dose independent rect. 8 23
319 42.02 wind 9.0 30 < th dose dependent rect. 4 1
320 42.02 humidity 50.0 30 > th dose dependent rect. 4 1
322 42.02 precipitation 0.1 30 < th dose dependent rect. 6 1
325 42.03 wind 1.0 30 > th dose independent rect. 6 1
326 42.03 humidity 90.0 30 < th dose independent rect. 6 1
335 42.04 temperature 30.0 30 < th dose dependent rect. 4 1
342 42.05 atmosphere 1015.0 30 < th dose dependent rect. 4 1
444 42.13 wind 9.0 30 < th dose independent rect. 5 23
447 42.14 atmosphere 1010.0 10 < th dose independent rect. 24 15
456 42.17 wind 9.0 30 < th dose independent rect. 7 23
460 42.18 wind 3.0 30 < th dose dependent rect. 4 3
463 42.19 temperature 25.0 720 > th dose independent rect. 20 2
464 42.19 atmosphere 1010.0 10 < th dose independent rect. 5 12
465 42.19 temperature 10.0 30 > th dose dependent rect. 6 1
473 42.22 atmosphere 995.0 30 > th dose independent rect. 5 23
481 42.23 humidity 90.0 10 < th dose independent rect. 4 3
482 42.23 atmosphere 1010.0 10 < th dose independent rect. 5 10
490 42.25 atmosphere 1005.0 30 > th dose independent rect. 4 3
508 42.29 temperature 25.0 10 > th dose independent sin 9 NA
514 42.29 atmosphere 1010.0 10 < th dose independent rect. 5 23
515 42.29 precipitation 0.1 30 < th dose independent rect. 5 23
521 42.29 precipitation 0.1 30 < th dose dependent rect. 5 23
524 42.30 atmosphere 1010.0 10 < th dose independent rect. 24 17
601 42.40 wind 3.0 270 > th dose independent rect. 3 1
602 42.40 radiation 10.0 10 < th dose independent rect. 4 3
604 42.40 atmosphere 1010.0 10 < th dose independent rect. 5 7
612 42.41 wind 3.0 30 < th dose independent rect. 4 3
622 42.42 atmosphere 1010.0 10 < th dose independent no NA NA
631 42.43 atmosphere 1010.0 10 < th dose independent rect. 20 15
633 42.43 atmosphere 995.0 30 > th dose independent rect. 7 23
640 42.44 precipitation 0.1 30 < th dose independent rect. 7 23
644 42.44 precipitation 0.1 30 < th dose dependent rect. 7 23
657 42.46 atmosphere 1010.0 10 < th dose independent rect. 5 16
666 42.47 atmosphere 1010.0 10 < th dose independent rect. 14 23
679 42.47 temperature 20.0 30 > th dose dependent rect. 22 9
687 42.48 humidity 90.0 10 < th dose dependent rect. 4 1
715 42.51 radiation 10.0 30 > th dose independent sin 11 NA
716 42.51 atmosphere 1005.0 270 > th dose independent rect. 3 2
726 42.52 temperature 25.0 10 < th dose independent sin 9 NA
732 42.52 atmosphere 1010.0 10 < th dose independent rect. 9 23
733 42.52 atmosphere 1010.0 10 < th dose independent rect. 18 23
751 42.53 atmosphere 1010.0 10 < th dose independent rect. 16 23
773 42.55 temperature 25.0 720 > th dose dependent rect. 19 3
785 42.56 radiation 10.0 10 < th dose dependent rect. 4 4
789 42.57 humidity 80.0 10 > th dose independent rect. 4 3
790 42.57 wind 1.0 90 > th dose independent rect. 3 4
808 42.58 temperature 25.0 720 > th dose dependent rect. 19 1
817 42.58 temperature 10.0 30 > th dose dependent rect. 7 21
849 42.60 temperature 25.0 720 > th dose dependent rect. 5 3
855 42.61 atmosphere 1010.0 720 < th dose independent rect. 23 1
893 42.63 wind 9.0 1440 < th dose independent rect. 5 3
894 42.63 temperature 10.0 1440 > th dose independent rect. 5 3
897 42.63 temperature 30.0 1440 < th dose independent rect. 5 3
901 42.63 humidity 50.0 1440 > th dose independent rect. 5 3
906 42.63 atmosphere 995.0 1440 > th dose independent rect. 5 3
907 42.63 atmosphere 1015.0 1440 < th dose independent rect. 5 3
908 42.63 atmosphere 1010.0 720 < th dose independent rect. 22 3
911 42.63 temperature 10.0 1440 > th dose independent rect. 8 21
926 42.64 wind 9.0 30 < th dose independent rect. 7 21
936 42.65 temperature 10.0 30 > th dose independent rect. 4 3
938 42.65 temperature 30.0 30 < th dose independent rect. 4 3
939 42.65 humidity 50.0 30 > th dose independent rect. 4 3
944 42.65 atmosphere 1015.0 30 < th dose independent rect. 4 3
948 42.65 precipitation 0.1 30 < th dose independent rect. 4 3
953 42.65 temperature 10.0 30 > th dose independent rect. 7 21
954 42.65 temperature 25.0 4320 > th dose dependent rect. 7 1
957 42.65 precipitation 0.1 30 < th dose dependent rect. 4 3
977 42.67 humidity 90.0 270 > th dose independent rect. 3 1
994 42.67 atmosphere 995.0 30 > th dose independent rect. 7 21
996 42.67 precipitation 0.1 30 < th dose independent rect. 7 21
997 42.67 temperature 30.0 30 < th dose independent rect. 7 23
998 42.67 radiation 1.0 30 > th dose independent rect. 7 23
999 42.67 humidity 90.0 10 < th dose dependent rect. 6 1