Os01g0310800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Pto kinase interactor 1.
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Os01g0310800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Pto kinase interactor 1.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 98.61 | 0.467 | 6.28 | 1.55 | 0.476 | 3.3 | 0.628 | -0.613 | 0.47 | 14.1 | 16.61 | 12 | -- | -- |
| 98.81 | 0.463 | 6.27 | 1.65 | 0.478 | 3.37 | 0.448 | -- | 0.495 | 14.1 | 16.11 | 12 | -- | -- |
| 99.53 | 0.465 | 6.27 | 1.67 | 0.483 | 3.45 | -- | 0.221 | 0.499 | 14.2 | 15.77 | 12 | -- | -- |
| 99.55 | 0.465 | 6.27 | 1.65 | 0.474 | 3.39 | -- | -- | 0.495 | 14.2 | 16.09 | 12 | -- | -- |
| 107.82 | 0.484 | 6.29 | 1.55 | -- | 3.59 | -- | -0.12 | 0.407 | -- | 17.92 | 12 | -- | -- |
| 223.13 | 0.7 | 6.15 | 2.33 | 1.52 | -- | 0.984 | -- | 1.01 | 14.3 | -- | -- | -- | -- |
| 226.69 | 0.705 | 6.15 | 2.36 | 1.53 | -- | -- | -- | 1.01 | 14.3 | -- | -- | -- | -- |
| 107.84 | 0.484 | 6.29 | 1.56 | -- | 3.58 | -- | -- | 0.412 | -- | 17.9 | 12 | -- | -- |
| 164.16 | 0.597 | 6.33 | -- | 0.227 | 4.46 | -- | -- | 0.217 | 13.9 | 8.008 | 13 | -- | -- |
| 364.54 | 0.892 | 6.16 | 2.29 | -- | -- | -- | -- | 0.976 | -- | -- | -- | -- | -- |
| 373.22 | 0.904 | 6.21 | -- | 1.48 | -- | -- | -- | 0.751 | 14.3 | -- | -- | -- | -- |
| 166.31 | 0.601 | 6.34 | -- | -- | 4.57 | -- | -- | 0.184 | -- | 15.1 | 13 | -- | -- |
| 503.3 | 1.05 | 6.22 | -- | -- | -- | -- | -- | 0.722 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 93.54 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 20 |
| 2 | 93.91 | temperature | 15 | 90 | > th | dose dependent | rect. | 3 | 23 |
| 9 | 95.43 | temperature | 30 | 90 | < th | dose dependent | rect. | 7 | 22 |
| 21 | 96.96 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 30 | 97.99 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 42 | 99.10 | temperature | 15 | 10 | > th | dose dependent | no | NA | NA |
| 57 | 100.49 | temperature | 30 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 58 | 100.56 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 61 | 100.65 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 66 | 100.75 | temperature | 30 | 30 | < th | dose dependent | no | NA | NA |
| 80 | 101.59 | temperature | 30 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 85 | 101.73 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 19 |
| 118 | 103.74 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 16 |
| 119 | 103.76 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 127 | 104.09 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 131 | 104.21 | temperature | 30 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 146 | 104.59 | temperature | 30 | 720 | < th | dose dependent | rect. | 21 | 17 |
| 174 | 105.14 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 220 | 106.18 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 21 |
| 230 | 106.30 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 237 | 106.48 | temperature | 10 | 720 | > th | dose dependent | sin | 5 | NA |
| 253 | 106.70 | temperature | 20 | 90 | > th | dose dependent | rect. | 9 | 23 |
| 257 | 106.76 | temperature | 20 | 10 | > th | dose dependent | rect. | 9 | 23 |
| 267 | 106.90 | temperature | 30 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 269 | 106.92 | temperature | 30 | 720 | < th | dose dependent | sin | 4 | NA |
| 275 | 107.02 | temperature | 25 | 1440 | < th | dose dependent | sin | 7 | NA |
| 283 | 107.05 | temperature | 20 | 90 | > th | dose dependent | rect. | 22 | 23 |
| 294 | 107.20 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 9 |
| 343 | 107.74 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 5 |
| 348 | 107.77 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 449 | 108.64 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 14 |
| 461 | 108.73 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 23 |
| 466 | 108.77 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 500 | 108.94 | temperature | 25 | 1440 | < th | dose dependent | rect. | 7 | 23 |
| 612 | 109.55 | temperature | 10 | 1440 | > th | dose dependent | sin | 8 | NA |
| 788 | 110.56 | temperature | 30 | 1440 | < th | dose dependent | rect. | 5 | 1 |
| 854 | 110.87 | temperature | 30 | 1440 | < th | dose dependent | rect. | 4 | 3 |
| 885 | 111.02 | temperature | 15 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 886 | 111.03 | temperature | 10 | 1440 | > th | dose dependent | rect. | 4 | 3 |
| 984 | 111.54 | temperature | 15 | 270 | > th | dose dependent | rect. | 12 | 23 |