Os01g0310600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0310600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 134.92 | 0.546 | 9.42 | -2.26 | 1.11 | -1.87 | -0.945 | -2.37 | -0.791 | 22.8 | 20.89 | 278 | -- | -- |
| 136.63 | 0.544 | 9.46 | -2.34 | 1.07 | -0.93 | -0.876 | -- | -0.841 | 22.8 | 23.03 | 375 | -- | -- |
| 138.47 | 0.548 | 9.42 | -2.2 | 1.13 | -1.66 | -- | -2.17 | -0.789 | 22.8 | 21.26 | 251 | -- | -- |
| 139.87 | 0.551 | 9.45 | -2.29 | 1.08 | -0.906 | -- | -- | -0.837 | 22.7 | 23.2 | 378 | -- | -- |
| 201.94 | 0.662 | 9.42 | -2.37 | -- | -1.83 | -- | -1.43 | -0.89 | -- | 22.04 | 732 | -- | -- |
| 146.47 | 0.567 | 9.43 | -2.11 | 1.09 | -- | -0.88 | -- | -0.704 | 22.5 | -- | -- | -- | -- |
| 149.63 | 0.573 | 9.42 | -2.08 | 1.1 | -- | -- | -- | -0.701 | 22.4 | -- | -- | -- | -- |
| 192.84 | 0.647 | 9.45 | -2.47 | -- | -1.35 | -- | -- | -0.985 | -- | 29 | 780 | -- | -- |
| 261.73 | 0.758 | 9.36 | -- | 1.04 | 0.347 | -- | -- | -0.426 | 22 | 33.67 | 12 | -- | -- |
| 223.36 | 0.698 | 9.4 | -2.06 | -- | -- | -- | -- | -0.697 | -- | -- | -- | -- | -- |
| 263.13 | 0.759 | 9.37 | -- | 1.09 | -- | -- | -- | -0.47 | 22.3 | -- | -- | -- | -- |
| 321.05 | 0.835 | 9.32 | -- | -- | 0.953 | -- | -- | -0.36 | -- | 43.11 | 2 | -- | -- |
| 334.94 | 0.854 | 9.34 | -- | -- | -- | -- | -- | -0.469 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 125.54 | humidity | 70 | 14400 | > th | dose dependent | rect. | 4 | 1 |
| 4 | 129.38 | humidity | 70 | 14400 | > th | dose dependent | rect. | 3 | 3 |
| 11 | 130.63 | radiation | 10 | 10 | < th | dose dependent | rect. | 6 | 23 |
| 12 | 130.72 | atmosphere | 1015 | 10 | < th | dose dependent | rect. | 6 | 23 |
| 14 | 130.76 | atmosphere | 1015 | 90 | < th | dose dependent | rect. | 6 | 22 |
| 33 | 132.33 | temperature | 20 | 90 | > th | dose independent | rect. | 6 | 22 |
| 37 | 132.45 | humidity | 90 | 14400 | < th | dose dependent | rect. | 1 | 6 |
| 40 | 132.72 | humidity | 90 | 4320 | < th | dose independent | rect. | 6 | 1 |
| 44 | 132.80 | humidity | 90 | 14400 | < th | dose dependent | rect. | 21 | 9 |
| 45 | 132.81 | humidity | 80 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 82 | 133.28 | wind | 9 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 83 | 133.28 | temperature | 20 | 10 | > th | dose independent | rect. | 6 | 23 |
| 91 | 133.51 | atmosphere | 1000 | 90 | > th | dose independent | rect. | 4 | 12 |
| 92 | 133.51 | temperature | 25 | 270 | > th | dose independent | rect. | 16 | 18 |
| 99 | 133.56 | humidity | 80 | 14400 | > th | dose independent | rect. | 18 | 13 |
| 102 | 133.57 | temperature | 25 | 270 | > th | dose dependent | rect. | 18 | 16 |
| 119 | 133.73 | wind | 9 | 14400 | > th | dose dependent | rect. | 12 | 3 |
| 128 | 133.79 | humidity | 50 | 14400 | > th | dose dependent | rect. | 19 | 11 |
| 149 | 133.87 | temperature | 25 | 270 | > th | dose dependent | sin | 10 | NA |
| 157 | 133.89 | temperature | 10 | 90 | > th | dose dependent | rect. | 6 | 22 |
| 185 | 134.08 | wind | 9 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 186 | 134.09 | radiation | 10 | 10 | < th | dose independent | rect. | 6 | 23 |
| 192 | 134.11 | wind | 9 | 14400 | > th | dose dependent | rect. | 3 | 12 |
| 197 | 134.13 | humidity | 80 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 202 | 134.15 | humidity | 80 | 14400 | < th | dose independent | rect. | 4 | 1 |
| 221 | 134.23 | temperature | 10 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 240 | 134.34 | humidity | 80 | 14400 | < th | dose independent | rect. | 18 | 13 |
| 264 | 134.47 | wind | 9 | 14400 | > th | dose independent | rect. | 13 | 4 |
| 325 | 134.68 | humidity | 80 | 14400 | > th | dose independent | sin | 11 | NA |
| 337 | 134.73 | wind | 1 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 339 | 134.73 | wind | 9 | 14400 | > th | dose independent | rect. | 3 | 13 |
| 354 | 134.77 | atmosphere | 1010 | 10 | < th | dose dependent | rect. | 18 | 20 |
| 405 | 134.92 | humidity | 80 | 14400 | > th | dose independent | rect. | 22 | 11 |
| 416 | 134.95 | temperature | 20 | 270 | < th | dose dependent | rect. | 4 | 22 |
| 449 | 135.07 | humidity | 80 | 14400 | < th | dose independent | sin | 10 | NA |
| 499 | 135.17 | temperature | 20 | 720 | > th | dose independent | rect. | 6 | 20 |
| 505 | 135.18 | humidity | 80 | 14400 | < th | dose independent | rect. | 23 | 7 |
| 512 | 135.19 | temperature | 20 | 90 | > th | dose independent | rect. | 17 | 11 |
| 527 | 135.23 | humidity | 80 | 14400 | < th | dose independent | rect. | 21 | 12 |
| 538 | 135.27 | temperature | 25 | 270 | > th | dose independent | rect. | 22 | 12 |
| 561 | 135.34 | wind | 1 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 563 | 135.34 | atmosphere | 995 | 30 | > th | dose dependent | rect. | 4 | 23 |
| 569 | 135.35 | atmosphere | 995 | 90 | > th | dose dependent | rect. | 19 | 23 |
| 570 | 135.36 | wind | 9 | 14400 | < th | dose independent | rect. | 13 | 4 |
| 600 | 135.42 | wind | 9 | 14400 | > th | dose independent | sin | 4 | NA |
| 602 | 135.42 | atmosphere | 995 | 90 | > th | dose dependent | rect. | 4 | 12 |
| 606 | 135.43 | radiation | 10 | 10 | < th | dose dependent | rect. | 7 | 7 |
| 607 | 135.44 | wind | 3 | 14400 | > th | dose independent | rect. | 2 | 1 |
| 619 | 135.45 | wind | 1 | 4320 | > th | dose independent | rect. | 10 | 18 |
| 626 | 135.47 | atmosphere | 1000 | 30 | > th | dose independent | rect. | 4 | 23 |
| 660 | 135.53 | temperature | 20 | 270 | < th | dose dependent | rect. | 19 | 21 |
| 674 | 135.57 | temperature | 20 | 270 | < th | dose dependent | rect. | 19 | 17 |
| 681 | 135.58 | atmosphere | 995 | 10 | > th | dose dependent | rect. | 20 | 22 |
| 693 | 135.60 | wind | 9 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 707 | 135.61 | atmosphere | 1000 | 10 | > th | dose dependent | rect. | 20 | 20 |
| 731 | 135.65 | temperature | 20 | 270 | < th | dose dependent | no | NA | NA |
| 733 | 135.65 | atmosphere | 1015 | 90 | < th | dose dependent | rect. | 18 | 10 |
| 737 | 135.65 | temperature | 20 | 270 | < th | dose dependent | rect. | 14 | 22 |
| 742 | 135.66 | wind | 1 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 743 | 135.66 | wind | 9 | 14400 | > th | dose dependent | sin | 4 | NA |
| 759 | 135.68 | humidity | 80 | 14400 | < th | dose independent | rect. | 23 | 2 |
| 761 | 135.68 | wind | 1 | 4320 | < th | dose independent | rect. | 10 | 18 |
| 766 | 135.68 | temperature | 20 | 270 | < th | dose dependent | rect. | 11 | 23 |
| 773 | 135.70 | wind | 9 | 14400 | < th | dose independent | rect. | 3 | 13 |
| 778 | 135.70 | temperature | 20 | 270 | < th | dose dependent | rect. | 8 | 23 |
| 800 | 135.73 | wind | 9 | 14400 | < th | dose independent | rect. | 24 | 16 |
| 859 | 135.84 | wind | 1 | 4320 | > th | dose independent | rect. | 10 | 3 |
| 892 | 135.90 | temperature | 20 | 270 | > th | dose independent | rect. | 3 | 23 |
| 905 | 135.92 | wind | 1 | 43200 | > th | dose independent | rect. | 18 | 9 |
| 909 | 135.92 | wind | 1 | 4320 | < th | dose independent | rect. | 13 | 15 |
| 930 | 135.95 | wind | 1 | 4320 | > th | dose independent | rect. | 13 | 15 |
| 934 | 135.95 | atmosphere | 1015 | 270 | < th | dose dependent | rect. | 15 | 21 |