Os01g0310500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0310500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 58.46 | 0.359 | 8.93 | -0.946 | 0.454 | 0.919 | 0.375 | -0.5 | -0.171 | 18.2 | 29.8 | 441 | -- | -- |
| 58.49 | 0.356 | 8.94 | -0.993 | 0.449 | 0.866 | 0.411 | -- | -0.178 | 18.2 | 29.7 | 441 | -- | -- |
| 58.76 | 0.357 | 8.93 | -0.945 | 0.441 | 0.908 | -- | -0.728 | -0.171 | 18 | 29.77 | 439 | -- | -- |
| 58.86 | 0.357 | 8.94 | -0.999 | 0.444 | 0.843 | -- | -- | -0.174 | 18.1 | 29.7 | 445 | -- | -- |
| 65.24 | 0.376 | 8.93 | -0.944 | -- | 0.589 | -- | -0.686 | -0.23 | -- | 30.5 | 922 | -- | -- |
| 73.66 | 0.402 | 8.92 | -1.13 | 0.116 | -- | -0.26 | -- | -0.153 | 17.4 | -- | -- | -- | -- |
| 73.74 | 0.402 | 8.93 | -1.13 | 0.121 | -- | -- | -- | -0.154 | 18.5 | -- | -- | -- | -- |
| 64.27 | 0.373 | 8.94 | -0.999 | -- | 0.605 | -- | -- | -0.248 | -- | 30.36 | 1943 | -- | -- |
| 84.36 | 0.428 | 8.91 | -- | 0.58 | 1.02 | -- | -- | -0.0315 | 17.8 | 29.6 | 439 | -- | -- |
| 74.5 | 0.403 | 8.92 | -1.13 | -- | -- | -- | -- | -0.157 | -- | -- | -- | -- | -- |
| 107.26 | 0.484 | 8.9 | -- | 0.136 | -- | -- | -- | -0.0285 | 18.1 | -- | -- | -- | -- |
| 89.03 | 0.439 | 8.86 | -- | -- | 0.721 | -- | -- | 0.0431 | -- | 28.8 | 4762 | -- | -- |
| 108.22 | 0.486 | 8.89 | -- | -- | -- | -- | -- | -0.0311 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 49.00 | temperature | 30.0 | 270 | < th | dose independent | rect. | 7 | 20 |
| 15 | 53.38 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 15 |
| 18 | 54.00 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 10 |
| 22 | 54.37 | temperature | 30.0 | 270 | < th | dose independent | rect. | 7 | 8 |
| 23 | 54.38 | humidity | 70.0 | 270 | > th | dose independent | rect. | 17 | 10 |
| 26 | 54.41 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 15 | 12 |
| 35 | 54.75 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 12 | 9 |
| 38 | 54.82 | radiation | 1.0 | 270 | < th | dose independent | rect. | 16 | 11 |
| 43 | 55.07 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 20 |
| 45 | 55.17 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 12 | 20 |
| 56 | 55.46 | radiation | 1.0 | 270 | < th | dose independent | rect. | 8 | 19 |
| 61 | 55.53 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 22 |
| 78 | 55.71 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 7 | 20 |
| 97 | 56.08 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 6 | 21 |
| 99 | 56.15 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 15 | 18 |
| 115 | 56.33 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 18 |
| 116 | 56.33 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 18 |
| 134 | 56.58 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 14 |
| 136 | 56.58 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 14 |
| 145 | 56.73 | radiation | 1.0 | 270 | > th | dose independent | rect. | 12 | 19 |
| 170 | 56.93 | wind | 1.0 | 270 | > th | dose independent | rect. | 12 | 19 |
| 172 | 56.97 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 12 | 9 |
| 174 | 56.98 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 15 | 18 |
| 178 | 57.03 | wind | 9.0 | 270 | < th | dose independent | rect. | 17 | 10 |
| 181 | 57.04 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 17 | 10 |
| 192 | 57.14 | temperature | 30.0 | 90 | < th | dose independent | rect. | 9 | 7 |
| 204 | 57.24 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 6 |
| 205 | 57.24 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 6 |
| 206 | 57.24 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 6 |
| 207 | 57.24 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 6 |
| 208 | 57.24 | temperature | 10.0 | 270 | > th | dose independent | rect. | 13 | 18 |
| 209 | 57.24 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 6 |
| 210 | 57.25 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 6 |
| 212 | 57.27 | temperature | 10.0 | 270 | > th | dose independent | rect. | 17 | 10 |
| 216 | 57.27 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 14 |
| 217 | 57.27 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 14 |
| 233 | 57.37 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 12 | 21 |
| 243 | 57.44 | radiation | 1.0 | 30 | > th | dose independent | rect. | 15 | 18 |
| 255 | 57.50 | radiation | 1.0 | 90 | < th | dose independent | sin | 13 | NA |
| 256 | 57.50 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 10 |
| 258 | 57.51 | temperature | 30.0 | 720 | < th | dose independent | rect. | 24 | 19 |
| 290 | 57.64 | wind | 9.0 | 270 | < th | dose independent | rect. | 13 | 18 |
| 292 | 57.65 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 6 |
| 301 | 57.68 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 22 |
| 310 | 57.71 | radiation | 1.0 | 90 | < th | dose dependent | sin | 13 | NA |
| 331 | 57.77 | radiation | 1.0 | 90 | > th | dose independent | sin | 12 | NA |
| 372 | 57.99 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 12 | 21 |
| 373 | 58.00 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 10 | 23 |
| 376 | 58.00 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 10 | 23 |
| 378 | 58.01 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 15 | 18 |
| 389 | 58.06 | radiation | 1.0 | 270 | > th | dose independent | rect. | 7 | 6 |
| 390 | 58.06 | wind | 9.0 | 270 | < th | dose independent | rect. | 3 | 14 |
| 393 | 58.08 | temperature | 30.0 | 720 | < th | dose independent | rect. | 15 | 21 |
| 402 | 58.11 | radiation | 40.0 | 30 | < th | dose independent | rect. | 15 | 18 |
| 415 | 58.13 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 12 | 7 |
| 422 | 58.14 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 12 | 19 |
| 442 | 58.21 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 9 | 6 |
| 466 | 58.28 | temperature | 10.0 | 10 | > th | dose independent | rect. | 9 | 6 |
| 468 | 58.28 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 9 | 6 |
| 469 | 58.28 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 9 | 6 |
| 470 | 58.28 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 9 | 6 |
| 472 | 58.28 | temperature | 10.0 | 10 | > th | dose independent | rect. | 15 | 18 |
| 475 | 58.28 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 9 | 6 |
| 488 | 58.33 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 6 |
| 527 | 58.40 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 10 | 6 |
| 531 | 58.40 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 16 | 18 |
| 539 | 58.42 | radiation | 20.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 544 | 58.44 | wind | 9.0 | 10 | < th | dose independent | rect. | 9 | 6 |
| 546 | 58.44 | wind | 9.0 | 30 | < th | dose independent | rect. | 15 | 18 |
| 553 | 58.45 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 20 |
| 555 | 58.45 | radiation | 40.0 | 90 | < th | dose independent | rect. | 13 | 20 |
| 572 | 58.47 | radiation | 1.0 | 10 | > th | dose independent | rect. | 9 | 6 |
| 585 | 58.49 | temperature | 30.0 | 720 | < th | dose independent | rect. | 22 | 14 |
| 590 | 58.50 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 3 | 4 |
| 597 | 58.51 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 4 |
| 600 | 58.51 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 4 |
| 610 | 58.52 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 12 | 15 |
| 612 | 58.53 | humidity | 70.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 619 | 58.54 | temperature | 30.0 | 270 | < th | dose independent | sin | 19 | NA |
| 633 | 58.57 | wind | 1.0 | 10 | > th | dose independent | rect. | 9 | 6 |
| 661 | 58.63 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 18 | 9 |
| 662 | 58.63 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 18 | 9 |
| 665 | 58.64 | wind | 9.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 666 | 58.64 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 668 | 58.64 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 669 | 58.64 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 671 | 58.64 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 672 | 58.64 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 676 | 58.64 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 20 |
| 696 | 58.67 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 20 |
| 703 | 58.69 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 9 | 19 |
| 710 | 58.71 | temperature | 30.0 | 270 | > th | dose independent | rect. | 11 | 8 |
| 767 | 58.78 | humidity | 90.0 | 270 | < th | dose independent | rect. | 12 | 8 |
| 804 | 58.87 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 13 | 18 |
| 817 | 58.90 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 3 | 4 |
| 824 | 58.91 | temperature | 25.0 | 270 | > th | dose dependent | sin | 19 | NA |
| 825 | 58.92 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 4 |
| 852 | 58.97 | radiation | 1.0 | 270 | < th | dose independent | sin | 15 | NA |
| 860 | 58.97 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 15 | 18 |
| 924 | 59.09 | temperature | 30.0 | 270 | > th | dose independent | sin | 19 | NA |
| 925 | 59.09 | temperature | 10.0 | 270 | > th | dose independent | rect. | 9 | 1 |
| 926 | 59.09 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 9 | 1 |
| 927 | 59.09 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 9 | 1 |
| 928 | 59.09 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 9 | 1 |
| 931 | 59.09 | temperature | 10.0 | 270 | > th | dose independent | rect. | 10 | 23 |
| 932 | 59.09 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 9 | 1 |
| 954 | 59.11 | wind | 9.0 | 270 | < th | dose independent | rect. | 9 | 1 |
| 965 | 59.14 | temperature | 30.0 | 270 | > th | dose independent | rect. | 15 | 1 |
| 975 | 59.15 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 12 | 19 |
| 979 | 59.16 | radiation | 1.0 | 270 | < th | dose dependent | sin | 15 | NA |