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Os01g0303000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to CP12 (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.6 (0.0333) R2 : 0.761
β1 : -- (--) R2dD : -- R2D : --
β2 : 3.69 (0.21) R2dC : 0.965 R2C : -1.9
β3 : 7.03 (0.251) R2dE : 2.44 R2E : -0.373
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -1.25 (0.0695) R2dN8 : 0.219 R2N8 : 0.145
σ : 0.62
deviance : 177.1
__
_____
C
peak time of C : 6.83
E
wheather : wind
threshold : 0.7948
memory length : 737
response mode : > th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 5.33
open length of G : 11.7

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
155.1 0.585 13.7 -0.442 2.18 5.23 1.94 5 -1.33 7.54 0.9 725 5.04 12
174.5 0.615 13.7 -0.403 2.88 5.94 -0.491 -- -1.42 6.92 0.7 747 5.28 11.3
159.88 0.589 13.7 -0.38 2.4 5.52 -- 3.28 -1.33 7.22 0.8 731 5.12 11.8
174.18 0.615 13.7 -0.384 3.13 6.3 -- -- -1.27 7.08 0.7101 737 5.33 11.7
220.11 0.691 13.8 0.148 -- 4.59 -- 4.67 -1.44 -- 0.8844 2141 3.98 11.9
187.37 0.642 13.7 -0.572 2.71 -- 2.42 -- -1.19 15.5 -- -- -- --
205.39 0.671 13.7 -0.53 2.72 -- -- -- -1.18 15.5 -- -- -- --
207.69 0.671 13.8 -0.275 -- 3.55 -- -- -1.44 -- 0.8942 2039 4.2 12.6
177.1 0.62 13.6 -- 3.69 7.03 -- -- -1.25 6.83 0.7948 737 5.33 11.7
618.51 1.16 13.7 -0.645 -- -- -- -- -1.25 -- -- -- -- --
212.8 0.682 13.7 -- 2.73 -- -- -- -1.12 15.5 -- -- -- --
205.21 0.667 13.8 -- -- 3.47 -- -- -1.36 -- 0.7 2034 4.15 12.8
629.48 1.17 13.7 -- -- -- -- -- -1.18 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 155.64 wind 1.0 720 > th dose independent rect. 5 12
2 156.27 temperature 30.0 270 < th dose independent rect. 21 13
3 156.87 humidity 70.0 30 > th dose independent rect. 13 18
8 158.25 atmosphere 995.0 90 > th dose dependent rect. 3 3
9 158.30 temperature 30.0 90 < th dose independent rect. 6 11
11 158.73 atmosphere 1010.0 10 < th dose independent rect. 3 4
12 158.80 precipitation 0.1 720 < th dose independent rect. 23 18
13 158.80 precipitation 0.1 720 < th dose dependent rect. 23 18
16 159.28 radiation 10.0 90 < th dose dependent rect. 3 4
17 159.61 atmosphere 1000.0 90 > th dose independent rect. 3 3
18 159.71 temperature 30.0 90 < th dose dependent rect. 3 3
19 159.72 wind 9.0 90 < th dose independent rect. 6 21
20 159.82 wind 9.0 720 < th dose dependent rect. 2 3
23 159.88 humidity 70.0 90 > th dose independent rect. 17 13
24 159.89 precipitation 0.1 90 < th dose independent rect. 6 21
25 159.89 precipitation 0.1 90 < th dose dependent rect. 6 21
26 159.90 radiation 10.0 90 < th dose independent rect. 3 4
27 159.90 atmosphere 995.0 90 > th dose independent rect. 6 21
31 160.04 humidity 50.0 270 > th dose independent rect. 15 14
32 160.23 humidity 50.0 270 > th dose independent rect. 10 10
37 160.42 wind 9.0 270 < th dose independent rect. 14 11
38 160.46 wind 5.0 90 < th dose independent rect. 3 3
40 160.51 temperature 30.0 90 < th dose independent rect. 6 7
47 160.67 temperature 10.0 90 > th dose independent rect. 3 3
49 160.67 temperature 30.0 90 < th dose independent rect. 3 3
50 160.67 humidity 50.0 90 > th dose independent rect. 3 3
59 160.67 temperature 10.0 90 > th dose independent rect. 6 21
60 160.69 humidity 50.0 270 > th dose independent rect. 11 18
61 160.71 radiation 40.0 90 < th dose dependent rect. 3 3
65 160.86 precipitation 0.1 90 < th dose independent rect. 3 3
66 160.86 precipitation 0.1 90 < th dose dependent rect. 3 3
67 160.98 temperature 30.0 720 < th dose independent rect. 23 10
70 161.05 temperature 10.0 270 > th dose independent rect. 14 11
71 161.05 temperature 10.0 270 > th dose independent rect. 1 13
72 161.05 atmosphere 995.0 270 > th dose independent rect. 1 13
73 161.05 atmosphere 1015.0 270 < th dose independent rect. 1 13
74 161.05 humidity 50.0 270 > th dose independent rect. 10 20
88 161.24 precipitation 0.1 270 < th dose independent rect. 14 11
89 161.24 precipitation 0.1 270 < th dose dependent rect. 14 11
93 161.37 radiation 10.0 90 < th dose dependent rect. 3 8
98 161.58 wind 9.0 90 < th dose dependent rect. 3 3
101 161.69 precipitation 0.1 720 < th dose independent rect. 5 6
102 161.69 precipitation 0.1 720 < th dose dependent rect. 5 6
103 161.80 atmosphere 1000.0 10 > th dose independent rect. 3 4
106 161.84 wind 9.0 10 < th dose independent rect. 7 20
115 162.01 precipitation 0.1 270 < th dose independent rect. 4 22
116 162.01 precipitation 0.1 270 < th dose dependent rect. 4 22
118 162.04 wind 9.0 270 < th dose independent rect. 1 13
121 162.10 atmosphere 995.0 10 > th dose independent rect. 7 20
122 162.12 wind 9.0 270 < th dose independent rect. 4 22
130 162.22 radiation 40.0 270 < th dose independent rect. 11 18
131 162.24 radiation 10.0 720 < th dose independent rect. 17 6
133 162.28 atmosphere 1000.0 270 > th dose independent rect. 1 4
138 162.33 precipitation 0.1 720 < th dose independent rect. 21 20
139 162.33 precipitation 0.1 720 < th dose dependent rect. 21 20
146 162.44 precipitation 0.1 720 < th dose independent rect. 23 10
147 162.44 precipitation 0.1 720 < th dose dependent rect. 23 10
148 162.45 humidity 50.0 270 > th dose independent rect. 13 16
176 162.84 humidity 50.0 90 > th dose dependent rect. 3 3
186 162.94 wind 5.0 10 < th dose independent rect. 3 4
190 162.95 wind 9.0 10 < th dose independent rect. 3 4
191 162.95 temperature 10.0 10 > th dose independent rect. 3 4
193 162.95 temperature 30.0 10 < th dose independent rect. 3 4
194 162.95 humidity 50.0 10 > th dose independent rect. 3 4
204 162.95 temperature 10.0 10 > th dose independent rect. 7 20
205 162.95 temperature 30.0 270 < th dose dependent rect. 2 1
208 162.97 radiation 1.0 720 > th dose independent rect. 6 3
243 163.07 temperature 10.0 270 > th dose independent rect. 4 22
250 163.08 wind 5.0 30 < th dose independent rect. 13 18
251 163.09 radiation 20.0 720 < th dose dependent rect. 17 12
252 163.11 radiation 10.0 720 < th dose independent rect. 17 12
261 163.22 humidity 50.0 90 > th dose dependent rect. 17 14
264 163.24 temperature 20.0 720 > th dose dependent rect. 4 1
288 163.29 precipitation 0.1 270 < th dose independent rect. 1 13
289 163.29 precipitation 0.1 270 < th dose dependent rect. 1 13
294 163.34 wind 9.0 1440 < th dose independent rect. 4 4
295 163.34 temperature 10.0 1440 > th dose independent rect. 4 4
298 163.34 temperature 30.0 1440 < th dose independent rect. 4 4
302 163.34 humidity 50.0 1440 > th dose independent rect. 4 4
307 163.34 atmosphere 995.0 1440 > th dose independent rect. 4 4
308 163.34 atmosphere 1015.0 1440 < th dose independent rect. 4 4
310 163.34 temperature 10.0 1440 > th dose independent rect. 8 20
315 163.38 wind 1.0 720 > th dose independent rect. 13 4
319 163.43 wind 1.0 30 > th dose independent rect. 7 20
324 163.47 temperature 30.0 90 < th dose independent rect. 17 13
336 163.52 wind 1.0 270 > th dose independent rect. 5 20
340 163.56 humidity 50.0 270 > th dose independent rect. 1 13
345 163.60 radiation 1.0 270 < th dose dependent rect. 24 21
347 163.61 wind 7.0 270 < th dose independent rect. 1 4
357 163.65 wind 1.0 270 > th dose independent rect. 2 2
365 163.67 temperature 10.0 270 > th dose independent rect. 1 4
367 163.67 temperature 30.0 270 < th dose independent rect. 1 4
368 163.67 humidity 50.0 270 > th dose independent rect. 1 4
391 163.77 wind 1.0 270 > th dose independent rect. 1 4
410 163.81 precipitation 0.1 720 < th dose independent rect. 6 11
413 163.81 precipitation 0.1 720 < th dose dependent rect. 6 11
421 163.85 radiation 40.0 720 < th dose dependent rect. 17 6
422 163.86 atmosphere 995.0 270 > th dose independent rect. 14 11
428 163.89 radiation 10.0 90 < th dose dependent rect. 3 12
438 163.94 wind 9.0 720 < th dose independent rect. 5 6
450 164.04 radiation 40.0 270 < th dose dependent rect. 13 16
451 164.05 radiation 40.0 1440 < th dose independent rect. 4 4
454 164.06 precipitation 0.1 270 < th dose independent rect. 21 13
455 164.06 precipitation 0.1 270 < th dose dependent rect. 21 13
465 164.17 radiation 10.0 720 < th dose independent rect. 17 4
469 164.18 temperature 10.0 720 > th dose independent rect. 17 6
472 164.18 temperature 10.0 720 > th dose independent rect. 23 18
473 164.19 temperature 15.0 270 > th dose independent rect. 10 11
480 164.25 temperature 10.0 720 > th dose independent rect. 5 6
481 164.25 atmosphere 995.0 720 > th dose independent rect. 5 6
482 164.25 atmosphere 1015.0 720 < th dose independent rect. 5 6
483 164.25 temperature 10.0 720 > th dose independent rect. 11 18
500 164.34 humidity 50.0 720 > th dose independent rect. 17 6
504 164.36 wind 9.0 270 < th dose independent rect. 21 13
529 164.41 temperature 10.0 270 > th dose independent rect. 21 13
530 164.41 humidity 50.0 270 > th dose independent rect. 21 13
531 164.41 atmosphere 995.0 270 > th dose independent rect. 21 13
536 164.43 temperature 30.0 30 < th dose independent rect. 7 20
550 164.49 atmosphere 1015.0 270 < th dose independent rect. 10 11
567 164.51 atmosphere 995.0 10 > th dose independent rect. 16 11
584 164.56 atmosphere 995.0 720 > th dose independent rect. 18 11
647 164.65 wind 9.0 10 < th dose independent rect. 16 11
690 164.71 humidity 50.0 10 > th dose dependent rect. 3 4
718 164.76 radiation 20.0 720 < th dose dependent rect. 17 4
720 164.78 temperature 10.0 90 > th dose dependent rect. 3 3
744 164.84 atmosphere 995.0 270 > th dose independent rect. 4 22
750 164.85 wind 9.0 720 < th dose independent rect. 23 18
752 164.86 radiation 20.0 10 < th dose independent rect. 16 11
767 164.96 temperature 20.0 720 > th dose independent rect. 4 1
774 164.98 humidity 70.0 30 > th dose dependent rect. 3 20
781 165.00 radiation 1.0 270 < th dose dependent rect. 1 18
785 165.03 humidity 50.0 720 > th dose independent rect. 17 4
786 165.03 radiation 40.0 270 < th dose independent rect. 15 10
788 165.04 radiation 30.0 270 < th dose independent rect. 6 3
798 165.06 humidity 50.0 270 > th dose independent rect. 24 21
851 165.13 humidity 50.0 30 > th dose dependent rect. 13 18
878 165.22 atmosphere 1015.0 90 < th dose independent rect. 6 21
882 165.23 atmosphere 1010.0 10 < th dose independent rect. 13 18
890 165.27 wind 9.0 720 < th dose independent rect. 17 6
892 165.28 humidity 80.0 10 > th dose independent rect. 3 20
895 165.29 wind 1.0 720 > th dose independent rect. 22 19
911 165.37 wind 9.0 270 < th dose independent rect. 5 12
912 165.37 radiation 1.0 270 < th dose dependent rect. 1 16
919 165.42 precipitation 0.1 720 < th dose independent rect. 14 3
921 165.42 precipitation 0.1 720 < th dose dependent rect. 14 3
924 165.43 temperature 10.0 10 > th dose independent rect. 16 11
925 165.43 radiation 40.0 10 < th dose independent rect. 16 11
926 165.43 temperature 10.0 10 > th dose independent rect. 3 13
928 165.43 atmosphere 1015.0 10 < th dose independent rect. 3 13
949 165.51 atmosphere 995.0 270 > th dose independent rect. 5 12
965 165.56 humidity 50.0 30 > th dose dependent rect. 15 16
973 165.60 precipitation 0.1 720 < th dose independent rect. 5 4
975 165.60 precipitation 0.1 720 < th dose dependent rect. 5 4