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Os01g0302800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.72 (0.0161) R2 : 0.501
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.845 (0.0395) R2dC : 0.504 R2C : 0.501
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0107 (0.0337) R2dN8 : 0.000142 R2N8 : -0.00288
σ : 0.302
deviance : 41.75
__
_____
C
peak time of C : 21.5
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = precipitation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
32.11 0.266 9.7 -0.266 0.845 0.477 -0.499 0.354 0.0682 21.5 0.02509 15024 -- --
32.19 0.264 9.7 -0.281 0.848 0.535 -0.505 -- 0.0697 21.5 0.1946 14785 -- --
33 0.268 9.7 -0.252 0.854 0.465 -- 0.391 0.0674 21.5 -0.08136 15564 -- --
33.11 0.268 9.7 -0.253 0.846 0.529 -- -- 0.0718 21.5 0.1923 14785 -- --
75.22 0.404 9.68 -0.274 -- 0.483 -- 0.207 0.0552 -- 0.1952 12218 -- --
40 0.297 9.72 -0.2 0.844 -- -0.49 -- -0.0315 21.5 -- -- -- --
40.88 0.299 9.72 -0.182 0.845 -- -- -- -0.0309 21.5 -- -- -- --
75.18 0.404 9.68 -0.295 -- 0.573 -- -- 0.0773 -- 0.3121 14891 -- --
34.32 0.273 9.69 -- 0.841 0.504 -- -- 0.0991 21.5 -0.08313 13843 -- --
82.9 0.425 9.7 -0.176 -- -- -- -- -0.0334 -- -- -- -- --
41.75 0.302 9.72 -- 0.845 -- -- -- -0.0107 21.5 -- -- -- --
76.57 0.408 9.67 -- -- 0.495 -- -- 0.102 -- -0.3032 14905 -- --
83.72 0.427 9.69 -- -- -- -- -- -0.0139 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 29.85 wind 7.0 43200 > th dose dependent rect. 10 4
3 30.10 wind 9.0 43200 < th dose independent rect. 10 4
8 30.23 wind 7.0 43200 > th dose independent rect. 11 3
16 30.42 wind 7.0 43200 > th dose dependent rect. 12 1
19 30.47 wind 9.0 43200 < th dose independent rect. 4 11
32 30.57 wind 9.0 43200 < th dose independent rect. 20 19
43 30.66 wind 9.0 43200 > th dose independent rect. 20 19
67 30.77 wind 1.0 43200 < th dose dependent rect. 1 1
82 30.81 wind 9.0 43200 > th dose independent rect. 4 11
91 30.86 wind 7.0 43200 > th dose dependent rect. 4 11
161 31.13 wind 3.0 43200 > th dose dependent rect. 6 1
191 31.22 wind 9.0 43200 < th dose independent sin 2 NA
197 31.24 wind 9.0 43200 > th dose independent rect. 14 1
198 31.24 wind 3.0 43200 > th dose independent rect. 2 5
212 31.28 wind 3.0 43200 > th dose independent rect. 2 8
214 31.28 wind 3.0 43200 > th dose independent rect. 2 10
216 31.29 wind 3.0 43200 < th dose independent rect. 2 5
218 31.29 wind 3.0 43200 > th dose independent rect. 20 14
219 31.30 wind 3.0 43200 > th dose independent rect. 20 12
243 31.36 wind 3.0 43200 < th dose independent rect. 2 10
247 31.36 wind 7.0 43200 > th dose dependent rect. 20 19
250 31.37 wind 3.0 43200 < th dose independent rect. 2 8
251 31.38 wind 1.0 43200 < th dose independent rect. 1 1
252 31.38 wind 3.0 43200 > th dose independent rect. 4 3
257 31.39 wind 3.0 43200 > th dose independent sin 7 NA
283 31.45 humidity 80.0 43200 > th dose independent rect. 2 1
286 31.45 wind 3.0 43200 < th dose independent rect. 21 13
319 31.49 wind 7.0 43200 > th dose independent sin 3 NA
323 31.49 wind 9.0 43200 < th dose independent rect. 10 11
334 31.50 wind 9.0 43200 < th dose independent rect. 10 20
337 31.51 wind 3.0 43200 > th dose independent rect. 4 6
341 31.51 wind 7.0 43200 > th dose dependent sin 3 NA
359 31.53 wind 3.0 43200 < th dose independent rect. 21 10
389 31.56 wind 9.0 43200 < th dose dependent rect. 6 1
390 31.56 wind 9.0 43200 > th dose dependent rect. 11 10
397 31.57 wind 9.0 43200 > th dose independent rect. 10 11
403 31.57 wind 9.0 43200 > th dose independent rect. 10 20
404 31.58 wind 3.0 43200 < th dose independent sin 7 NA
431 31.60 wind 9.0 43200 < th dose independent rect. 3 18
475 31.65 wind 3.0 43200 > th dose independent rect. 6 2
489 31.65 wind 9.0 43200 > th dose dependent rect. 11 19
492 31.66 wind 9.0 43200 < th dose independent rect. 14 2
520 31.67 wind 9.0 43200 > th dose dependent rect. 14 1
539 31.69 humidity 80.0 43200 < th dose independent rect. 22 1
540 31.69 humidity 80.0 43200 < th dose independent rect. 22 5
569 31.70 radiation 40.0 43200 > th dose dependent rect. 10 1
583 31.72 wind 3.0 43200 > th dose independent rect. 2 2
587 31.72 humidity 80.0 43200 < th dose independent rect. 22 3
602 31.73 humidity 80.0 43200 < th dose independent rect. 2 1
625 31.74 wind 9.0 43200 > th dose independent rect. 3 18
631 31.74 wind 3.0 43200 > th dose dependent rect. 2 14
635 31.75 humidity 80.0 43200 > th dose independent rect. 22 7
664 31.76 wind 1.0 43200 > th dose dependent sin 5 NA
666 31.76 wind 1.0 43200 > th dose dependent rect. 2 12
671 31.77 temperature 20.0 14400 > th dose independent rect. 20 5
683 31.77 precipitation 0.1 43200 > th dose dependent rect. 15 5
684 31.78 wind 9.0 43200 < th dose independent no NA NA
740 31.80 wind 9.0 43200 < th dose dependent sin 5 NA
759 31.81 wind 9.0 43200 < th dose dependent rect. 1 13
774 31.83 temperature 20.0 14400 < th dose independent rect. 20 5
788 31.83 wind 9.0 43200 < th dose dependent rect. 3 11
792 31.84 radiation 40.0 43200 < th dose independent rect. 10 1
841 31.86 radiation 10.0 43200 > th dose independent rect. 8 1
859 31.87 precipitation 0.1 14400 < th dose independent rect. 4 19
871 31.87 precipitation 0.1 14400 < th dose dependent rect. 4 19
872 31.88 wind 9.0 43200 > th dose independent no NA NA
900 31.89 precipitation 0.1 14400 > th dose independent rect. 16 10
901 31.89 precipitation 0.1 14400 < th dose independent rect. 16 10
907 31.89 precipitation 0.1 14400 > th dose independent rect. 4 19
914 31.89 precipitation 0.1 14400 < th dose dependent rect. 16 10
918 31.90 precipitation 0.1 14400 > th dose independent sin 23 NA
920 31.90 precipitation 0.1 14400 < th dose independent sin 23 NA
928 31.90 humidity 80.0 43200 < th dose independent rect. 24 5
936 31.90 precipitation 0.1 14400 < th dose dependent sin 23 NA
963 31.91 precipitation 0.1 14400 > th dose independent rect. 4 21
974 31.91 wind 9.0 43200 < th dose dependent rect. 5 8
996 31.92 precipitation 0.1 14400 > th dose independent rect. 8 18