Os01g0301100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0301100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 229.37 | 0.712 | 4.9 | -0.638 | 2.01 | 1.44 | 0.0547 | -4.54 | -0.0404 | 3.19 | 25.8 | 23 | -- | -- |
| 235.46 | 0.72 | 4.84 | -0.172 | 1.96 | 1.05 | 0.608 | -- | 0.0765 | 3.17 | 25.8 | 23 | -- | -- |
| 229.38 | 0.705 | 4.9 | -0.644 | 2.01 | 1.44 | -- | -4.6 | -0.0424 | 3.19 | 25.8 | 22 | -- | -- |
| 236.42 | 0.716 | 4.84 | -0.181 | 1.96 | 1.03 | -- | -- | 0.0727 | 3.24 | 25.8 | 22 | -- | -- |
| 376.27 | 0.908 | 4.82 | 0.0163 | -- | -0.784 | -- | -1.11 | 0.216 | -- | 24.1 | 8 | -- | -- |
| 251.64 | 0.744 | 4.83 | -0.0287 | 1.59 | -- | 0.253 | -- | 0.125 | 3.26 | -- | -- | -- | -- |
| 251.84 | 0.743 | 4.83 | -0.0337 | 1.59 | -- | -- | -- | 0.123 | 3.28 | -- | -- | -- | -- |
| 375.82 | 0.903 | 4.81 | 0.166 | -- | -0.878 | -- | -- | 0.258 | -- | 24.16 | 38 | -- | -- |
| 237.26 | 0.717 | 4.84 | -- | 1.93 | 0.984 | -- | -- | 0.0971 | 3.24 | 25.85 | 22 | -- | -- |
| 395.02 | 0.929 | 4.83 | 0.0338 | -- | -- | -- | -- | 0.165 | -- | -- | -- | -- | -- |
| 251.87 | 0.742 | 4.83 | -- | 1.59 | -- | -- | -- | 0.127 | 3.28 | -- | -- | -- | -- |
| 376.53 | 0.904 | 4.81 | -- | -- | -0.854 | -- | -- | 0.235 | -- | 24.2 | 38 | -- | -- |
| 395.05 | 0.928 | 4.83 | -- | -- | -- | -- | -- | 0.161 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 218.56 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 24 | 15 |
| 2 | 218.69 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 3 | 1 |
| 8 | 219.92 | temperature | 25.0 | 270 | < th | dose independent | rect. | 7 | 1 |
| 9 | 219.99 | temperature | 30.0 | 90 | < th | dose independent | rect. | 5 | 22 |
| 14 | 220.47 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 5 | 3 |
| 15 | 220.47 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 3 | 17 |
| 16 | 220.53 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 1 | 4 |
| 20 | 221.18 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 24 | 9 |
| 27 | 221.56 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 23 | 12 |
| 29 | 221.77 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 1 | 4 |
| 39 | 222.04 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 21 | 14 |
| 54 | 222.69 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 3 | 13 |
| 60 | 222.84 | temperature | 20.0 | 720 | > th | dose dependent | sin | 8 | NA |
| 70 | 222.99 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 3 | 19 |
| 89 | 223.42 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 94 | 223.51 | wind | 3.0 | 4320 | > th | dose dependent | rect. | 20 | 2 |
| 107 | 223.78 | temperature | 10.0 | 270 | > th | dose dependent | sin | 4 | NA |
| 109 | 223.80 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 1 | 10 |
| 129 | 224.15 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 1 | 19 |
| 139 | 224.31 | wind | 5.0 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 143 | 224.39 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 20 | 7 |
| 144 | 224.39 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 15 |
| 160 | 224.61 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 172 | 224.68 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 182 | 224.86 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 22 | 5 |
| 189 | 224.93 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 190 | 224.93 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 198 | 224.97 | wind | 5.0 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 203 | 225.04 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 6 | 5 |
| 207 | 225.10 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 1 | 21 |
| 208 | 225.12 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 230 | 225.30 | wind | 5.0 | 14400 | < th | dose independent | rect. | 19 | 20 |
| 235 | 225.33 | wind | 5.0 | 14400 | > th | dose independent | rect. | 19 | 20 |
| 237 | 225.34 | temperature | 10.0 | 720 | > th | dose dependent | sin | 8 | NA |
| 244 | 225.40 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 15 | 1 |
| 260 | 225.56 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 24 | 3 |
| 281 | 225.71 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 310 | 225.93 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 311 | 225.93 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 18 | 17 |
| 319 | 226.00 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 22 | 11 |
| 329 | 226.05 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 335 | 226.09 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 359 | 226.19 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 19 | 6 |
| 367 | 226.24 | wind | 9.0 | 270 | < th | dose dependent | rect. | 24 | 13 |
| 368 | 226.25 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 12 | 4 |
| 423 | 226.51 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 4 | 9 |
| 447 | 226.58 | wind | 9.0 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 455 | 226.61 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 458 | 226.64 | temperature | 20.0 | 720 | > th | dose independent | rect. | 3 | 2 |
| 474 | 226.72 | wind | 9.0 | 10 | < th | dose dependent | rect. | 3 | 13 |
| 497 | 226.81 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 14 | 7 |
| 508 | 226.83 | temperature | 20.0 | 270 | > th | dose independent | rect. | 24 | 15 |
| 537 | 226.91 | wind | 7.0 | 10 | < th | dose independent | rect. | 3 | 13 |
| 541 | 226.92 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 14 | 2 |
| 556 | 226.98 | temperature | 20.0 | 720 | > th | dose independent | rect. | 1 | 4 |
| 562 | 226.99 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 12 | 9 |
| 584 | 227.03 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 7 | 13 |
| 644 | 227.20 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 14 | 2 |
| 676 | 227.29 | wind | 9.0 | 10 | < th | dose dependent | rect. | 3 | 15 |
| 690 | 227.33 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 7 | 15 |
| 691 | 227.34 | wind | 7.0 | 10 | < th | dose independent | rect. | 3 | 15 |
| 696 | 227.36 | wind | 5.0 | 14400 | > th | dose independent | rect. | 3 | 22 |
| 697 | 227.36 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 698 | 227.36 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 5 | 22 |
| 707 | 227.39 | wind | 5.0 | 14400 | > th | dose independent | rect. | 5 | 23 |
| 729 | 227.43 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 1 | 15 |
| 732 | 227.44 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 733 | 227.44 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 3 | 2 |
| 743 | 227.47 | wind | 5.0 | 14400 | > th | dose independent | no | NA | NA |
| 758 | 227.52 | wind | 5.0 | 14400 | > th | dose independent | rect. | 24 | 23 |
| 801 | 227.67 | wind | 5.0 | 14400 | < th | dose independent | rect. | 5 | 10 |
| 839 | 227.77 | wind | 5.0 | 14400 | > th | dose independent | rect. | 5 | 10 |
| 847 | 227.79 | wind | 5.0 | 14400 | > th | dose independent | rect. | 10 | 23 |
| 851 | 227.81 | atmosphere | 995.0 | 43200 | > th | dose independent | sin | 22 | NA |
| 891 | 227.91 | wind | 5.0 | 14400 | < th | dose independent | rect. | 3 | 22 |
| 904 | 227.93 | wind | 5.0 | 14400 | < th | dose independent | rect. | 5 | 23 |
| 909 | 227.95 | atmosphere | 995.0 | 43200 | < th | dose independent | sin | 22 | NA |
| 923 | 227.98 | wind | 5.0 | 14400 | < th | dose independent | no | NA | NA |
| 943 | 228.03 | wind | 5.0 | 14400 | < th | dose independent | rect. | 23 | 23 |
| 960 | 228.10 | wind | 5.0 | 14400 | < th | dose independent | rect. | 7 | 23 |