Os01g0300200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to ATP-citrate lyase subunit B.
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Os01g0300200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to ATP-citrate lyase subunit B.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 17.16 | 0.195 | 11.9 | 0.301 | 0.507 | -0.149 | 0.0701 | 2.93 | 0.0639 | 3.41 | 25.5 | 3659 | -- | -- |
| 18.64 | 0.201 | 12 | -0.376 | 0.495 | 0.209 | 0.213 | -- | -0.167 | 3.22 | 29.72 | 11938 | -- | -- |
| 17.12 | 0.193 | 11.9 | 0.342 | 0.506 | -0.197 | -- | 3.37 | 0.0599 | 3.41 | 26.4 | 3589 | -- | -- |
| 18.22 | 0.199 | 12 | -0.39 | 0.511 | 0.209 | -- | -- | -0.179 | 3.6 | 30.89 | 13431 | -- | -- |
| 30.47 | 0.258 | 12 | -0.254 | -- | -0.452 | -- | -0.232 | -0.0507 | -- | 26.4 | 3589 | -- | -- |
| 19.87 | 0.209 | 12 | -0.31 | 0.518 | -- | 0.132 | -- | -0.0681 | 3.43 | -- | -- | -- | -- |
| 19.92 | 0.209 | 12 | -0.312 | 0.519 | -- | -- | -- | -0.0689 | 3.44 | -- | -- | -- | -- |
| 30.48 | 0.258 | 12 | -0.233 | -- | -0.47 | -- | -- | -0.0461 | -- | 26.4 | 3589 | -- | -- |
| 21.98 | 0.218 | 12 | -- | 0.51 | 0.103 | -- | -- | -0.0846 | 3.47 | 30.9 | 13250 | -- | -- |
| 35.04 | 0.277 | 12 | -0.29 | -- | -- | -- | -- | -0.0552 | -- | -- | -- | -- | -- |
| 22.49 | 0.222 | 12 | -- | 0.513 | -- | -- | -- | -0.0342 | 3.44 | -- | -- | -- | -- |
| 31.89 | 0.264 | 12 | -- | -- | -0.506 | -- | -- | -0.02 | -- | 26.4 | 3589 | -- | -- |
| 37.26 | 0.285 | 12 | -- | -- | -- | -- | -- | -0.023 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 16.39 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 5 | 16.59 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 17 | 6 |
| 6 | 16.61 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 22 | 3 |
| 13 | 16.68 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 9 | 18 |
| 30 | 16.87 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 20 | 2 |
| 53 | 16.97 | temperature | 20.0 | 90 | > th | dose independent | rect. | 9 | 18 |
| 72 | 17.00 | wind | 7.0 | 30 | < th | dose dependent | rect. | 4 | 5 |
| 102 | 17.04 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 3 |
| 103 | 17.04 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 108 | 17.05 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 3 |
| 116 | 17.08 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 9 | 19 |
| 131 | 17.10 | temperature | 25.0 | 720 | > th | dose dependent | sin | 12 | NA |
| 144 | 17.12 | temperature | 20.0 | 30 | > th | dose independent | rect. | 4 | 5 |
| 152 | 17.14 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 6 |
| 156 | 17.14 | wind | 9.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 157 | 17.14 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 3 | 3 |
| 162 | 17.14 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 6 |
| 171 | 17.17 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 22 | 3 |
| 180 | 17.18 | wind | 9.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 181 | 17.18 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 183 | 17.18 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 184 | 17.18 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 187 | 17.18 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 188 | 17.18 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 190 | 17.18 | radiation | 20.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 193 | 17.18 | wind | 7.0 | 30 | < th | dose independent | rect. | 4 | 5 |
| 195 | 17.18 | temperature | 10.0 | 30 | > th | dose independent | rect. | 4 | 5 |
| 197 | 17.18 | temperature | 30.0 | 30 | < th | dose independent | rect. | 4 | 5 |
| 198 | 17.18 | humidity | 50.0 | 30 | > th | dose independent | rect. | 4 | 5 |
| 200 | 17.18 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 4 | 5 |
| 201 | 17.18 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 4 | 5 |
| 203 | 17.18 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 21 |
| 207 | 17.18 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 4 | 5 |
| 210 | 17.19 | wind | 1.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 213 | 17.19 | temperature | 20.0 | 270 | > th | dose independent | rect. | 22 | 3 |
| 214 | 17.19 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 16 | 17 |
| 231 | 17.21 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 237 | 17.22 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 21 |
| 238 | 17.22 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 21 |
| 239 | 17.22 | temperature | 25.0 | 4320 | > th | dose dependent | sin | 13 | NA |
| 244 | 17.23 | radiation | 40.0 | 30 | < th | dose independent | rect. | 4 | 5 |
| 245 | 17.23 | wind | 9.0 | 30 | < th | dose independent | rect. | 9 | 19 |
| 248 | 17.23 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 24 | 4 |
| 268 | 17.25 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 17 | 1 |
| 273 | 17.25 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 297 | 17.27 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 9 | 19 |
| 298 | 17.27 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 21 |
| 311 | 17.27 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 21 |
| 325 | 17.28 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 21 |
| 328 | 17.28 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 23 | 2 |
| 332 | 17.28 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 4 | 5 |
| 335 | 17.28 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 21 |
| 346 | 17.29 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 16 | 12 |
| 357 | 17.30 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 16 | 4 |
| 376 | 17.31 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 16 | 2 |
| 386 | 17.32 | wind | 5.0 | 270 | < th | dose independent | rect. | 22 | 3 |
| 388 | 17.32 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 9 | 18 |
| 390 | 17.32 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 24 | 1 |
| 399 | 17.32 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 9 | 18 |
| 408 | 17.33 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 21 |
| 416 | 17.33 | radiation | 40.0 | 30 | < th | dose dependent | rect. | 9 | 19 |
| 429 | 17.35 | wind | 1.0 | 1440 | < th | dose independent | rect. | 4 | 1 |
| 434 | 17.35 | temperature | 30.0 | 270 | < th | dose independent | rect. | 22 | 3 |
| 435 | 17.35 | humidity | 50.0 | 270 | > th | dose independent | rect. | 22 | 3 |
| 438 | 17.35 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 22 | 3 |
| 439 | 17.35 | radiation | 1.0 | 270 | < th | dose independent | rect. | 22 | 3 |
| 445 | 17.35 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 16 | 17 |
| 447 | 17.35 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 21 |
| 454 | 17.35 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 22 | 3 |
| 466 | 17.36 | temperature | 25.0 | 720 | > th | dose independent | rect. | 19 | 1 |
| 468 | 17.36 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 24 | 3 |
| 497 | 17.37 | temperature | 25.0 | 270 | < th | dose independent | rect. | 17 | 14 |
| 530 | 17.39 | wind | 1.0 | 270 | > th | dose independent | rect. | 22 | 3 |
| 532 | 17.39 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 22 | 3 |
| 540 | 17.39 | wind | 9.0 | 270 | < th | dose independent | rect. | 1 | 21 |
| 544 | 17.39 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 545 | 17.39 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 22 | 3 |
| 573 | 17.41 | humidity | 70.0 | 1440 | > th | dose independent | sin | 12 | NA |
| 577 | 17.41 | temperature | 25.0 | 720 | > th | dose independent | rect. | 18 | 3 |
| 578 | 17.41 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 24 | 4 |
| 586 | 17.41 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 19 | 2 |
| 626 | 17.43 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 22 | 6 |
| 642 | 17.44 | wind | 1.0 | 1440 | > th | dose independent | rect. | 4 | 1 |
| 676 | 17.44 | wind | 1.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 693 | 17.45 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 16 | 4 |
| 717 | 17.45 | wind | 9.0 | 270 | < th | dose dependent | rect. | 22 | 3 |
| 723 | 17.46 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 796 | 17.48 | temperature | 25.0 | 270 | > th | dose independent | rect. | 20 | 7 |
| 853 | 17.51 | wind | 1.0 | 90 | > th | dose independent | rect. | 9 | 18 |
| 864 | 17.51 | wind | 9.0 | 30 | < th | dose dependent | rect. | 9 | 19 |
| 892 | 17.53 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 13 | 2 |
| 941 | 17.54 | humidity | 90.0 | 270 | < th | dose independent | rect. | 23 | 2 |
| 976 | 17.55 | humidity | 90.0 | 270 | > th | dose independent | rect. | 1 | 5 |