Os01g0299100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os01g0299100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 84.27 | 0.431 | 3.15 | 0.0513 | 0.171 | -0.619 | 0.138 | 0.691 | -0.0141 | 6.97 | 1.122 | 45 | -- | -- |
| 84.57 | 0.428 | 3.14 | 0.0814 | 0.172 | -0.551 | 0.125 | -- | -0.00624 | 7 | 1.1 | 44 | -- | -- |
| 84.32 | 0.428 | 3.15 | 0.0544 | 0.171 | -0.62 | -- | 0.669 | -0.0142 | 6.99 | 1.128 | 44 | -- | -- |
| 84.6 | 0.428 | 3.14 | 0.0864 | 0.181 | -0.548 | -- | -- | -0.0106 | 6.87 | 1.142 | 44 | -- | -- |
| 85.66 | 0.431 | 3.15 | 0.0384 | -- | -0.725 | -- | 0.833 | -0.00836 | -- | 1.191 | 44 | -- | -- |
| 89.91 | 0.445 | 3.14 | 0.153 | 0.321 | -- | 0.214 | -- | -0.0366 | 5.82 | -- | -- | -- | -- |
| 90.02 | 0.444 | 3.15 | 0.155 | 0.322 | -- | -- | -- | -0.0375 | 5.8 | -- | -- | -- | -- |
| 86.16 | 0.432 | 3.14 | 0.0646 | -- | -0.569 | -- | -- | -0.00226 | -- | 1.247 | 53 | -- | -- |
| 84.79 | 0.429 | 3.14 | -- | 0.178 | -0.563 | -- | -- | -0.0194 | 6.89 | 1.133 | 44 | -- | -- |
| 95.39 | 0.456 | 3.15 | 0.165 | -- | -- | -- | -- | -0.0299 | -- | -- | -- | -- | -- |
| 90.65 | 0.445 | 3.15 | -- | 0.324 | -- | -- | -- | -0.0547 | 5.78 | -- | -- | -- | -- |
| 86.27 | 0.433 | 3.15 | -- | -- | -0.58 | -- | -- | -0.00876 | -- | 1.245 | 53 | -- | -- |
| 96.1 | 0.458 | 3.15 | -- | -- | -- | -- | -- | -0.0482 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 78.57 | wind | 1.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 3 | 79.19 | wind | 1.0 | 90 | < th | dose independent | rect. | 4 | 1 |
| 19 | 82.05 | wind | 1.0 | 90 | < th | dose dependent | rect. | 4 | 9 |
| 20 | 82.05 | wind | 1.0 | 90 | < th | dose dependent | rect. | 4 | 12 |
| 31 | 82.17 | wind | 1.0 | 90 | < th | dose independent | rect. | 4 | 5 |
| 38 | 82.30 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 41 | 82.35 | wind | 1.0 | 30 | > th | dose independent | rect. | 23 | 23 |
| 44 | 82.52 | wind | 1.0 | 90 | < th | dose dependent | rect. | 4 | 23 |
| 45 | 82.54 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 21 | 2 |
| 58 | 82.94 | humidity | 90.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 59 | 82.94 | wind | 1.0 | 90 | < th | dose independent | rect. | 4 | 12 |
| 84 | 83.24 | temperature | 25.0 | 90 | < th | dose independent | rect. | 4 | 1 |
| 90 | 83.32 | wind | 1.0 | 90 | < th | dose independent | rect. | 1 | 9 |
| 91 | 83.33 | humidity | 70.0 | 720 | > th | dose independent | rect. | 19 | 9 |
| 92 | 83.33 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 96 | 83.41 | wind | 7.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 98 | 83.41 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 101 | 83.41 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 105 | 83.41 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 114 | 83.41 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 115 | 83.41 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 116 | 83.41 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 126 | 83.41 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 6 | 23 |
| 136 | 83.51 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 137 | 83.52 | temperature | 20.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 143 | 83.62 | humidity | 50.0 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 145 | 83.62 | temperature | 30.0 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 161 | 83.63 | humidity | 50.0 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 163 | 83.65 | wind | 1.0 | 90 | > th | dose independent | rect. | 23 | 12 |
| 169 | 83.70 | wind | 1.0 | 90 | > th | dose independent | sin | 5 | NA |
| 185 | 83.80 | wind | 1.0 | 90 | < th | dose dependent | rect. | 1 | 9 |
| 196 | 83.87 | humidity | 70.0 | 720 | < th | dose independent | rect. | 19 | 1 |
| 242 | 83.97 | humidity | 70.0 | 720 | < th | dose dependent | rect. | 19 | 1 |
| 259 | 84.02 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 260 | 84.04 | temperature | 20.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 261 | 84.04 | humidity | 90.0 | 10 | > th | dose independent | rect. | 4 | 2 |
| 265 | 84.07 | wind | 1.0 | 90 | < th | dose dependent | rect. | 1 | 12 |
| 282 | 84.13 | wind | 1.0 | 90 | < th | dose independent | rect. | 4 | 23 |
| 284 | 84.16 | humidity | 80.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 296 | 84.19 | wind | 1.0 | 90 | < th | dose dependent | rect. | 2 | 14 |
| 302 | 84.20 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 312 | 84.22 | wind | 1.0 | 90 | < th | dose independent | sin | 5 | NA |
| 314 | 84.22 | wind | 1.0 | 90 | < th | dose independent | rect. | 1 | 15 |
| 334 | 84.25 | wind | 1.0 | 90 | < th | dose dependent | rect. | 14 | 15 |
| 368 | 84.32 | wind | 1.0 | 90 | < th | dose dependent | sin | 5 | NA |
| 374 | 84.35 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 380 | 84.36 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 18 | 5 |
| 390 | 84.40 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 399 | 84.42 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 404 | 84.43 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 4 | 1 |
| 408 | 84.43 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 415 | 84.44 | temperature | 10.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 418 | 84.44 | humidity | 50.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 422 | 84.44 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 4 | 1 |
| 424 | 84.44 | radiation | 1.0 | 90 | < th | dose independent | rect. | 4 | 1 |
| 431 | 84.44 | temperature | 10.0 | 90 | > th | dose independent | rect. | 5 | 23 |
| 433 | 84.44 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 436 | 84.45 | wind | 5.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 439 | 84.45 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 446 | 84.46 | temperature | 30.0 | 720 | > th | dose independent | rect. | 18 | 1 |
| 470 | 84.48 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 472 | 84.48 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 473 | 84.48 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 477 | 84.48 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 479 | 84.48 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 484 | 84.48 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 485 | 84.48 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 486 | 84.48 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 491 | 84.48 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 500 | 84.51 | wind | 9.0 | 90 | < th | dose independent | rect. | 5 | 23 |
| 531 | 84.62 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 539 | 84.64 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 5 | 1 |
| 541 | 84.64 | radiation | 20.0 | 1440 | > th | dose dependent | rect. | 6 | 2 |
| 570 | 84.66 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 590 | 84.71 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 18 | 14 |
| 605 | 84.77 | wind | 1.0 | 30 | > th | dose independent | rect. | 23 | 16 |
| 664 | 84.86 | wind | 1.0 | 90 | < th | dose independent | rect. | 14 | 16 |
| 674 | 84.88 | radiation | 20.0 | 1440 | > th | dose independent | rect. | 6 | 2 |
| 690 | 84.88 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 16 | 16 |
| 699 | 84.89 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 704 | 84.90 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 7 | 1 |
| 705 | 84.90 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 24 | 8 |
| 709 | 84.91 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 3 | 5 |
| 720 | 84.92 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 19 | 13 |
| 736 | 84.93 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 7 | 1 |
| 753 | 84.95 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 19 | 2 |
| 755 | 84.95 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 19 | 6 |
| 768 | 84.96 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 18 | 12 |
| 780 | 84.98 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 836 | 85.04 | wind | 1.0 | 1440 | > th | dose independent | rect. | 4 | 1 |
| 846 | 85.05 | wind | 1.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 854 | 85.06 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 5 | 23 |
| 872 | 85.09 | humidity | 80.0 | 1440 | < th | dose dependent | sin | 12 | NA |
| 877 | 85.10 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 23 | 6 |
| 881 | 85.12 | wind | 1.0 | 30 | > th | dose independent | rect. | 23 | 10 |
| 883 | 85.12 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 884 | 85.12 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 1 | 2 |
| 888 | 85.13 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 18 | 11 |
| 891 | 85.13 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 23 | 6 |
| 892 | 85.13 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 15 | 17 |
| 934 | 85.14 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 4 | 12 |
| 950 | 85.16 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 18 | 6 |
| 977 | 85.18 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 3 |
| 978 | 85.18 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 6 | 4 |
| 983 | 85.18 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 15 | 19 |
| 987 | 85.19 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 2 |
| 988 | 85.19 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 15 | 11 |