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Os01g0297200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : AAA ATPase domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.14 (0.0632) R2 : 0.527
β1 : 3.95 (0.231) R2dD : 0.322 R2D : 0.154
β2 : 1.07 (0.151) R2dC : 0.0538 R2C : -0.00237
β3 : 1.86 (0.216) R2dE : 0.0733 R2E : 0.00308
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 1.78 (0.135) R2dN8 : 0.238 R2N8 : 0.093
σ : 1.18
deviance : 643.11
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C
peak time of C : 10.9
E
wheather : humidity
threshold : 50.75
memory length : 1438
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 15.8
open length of G : 1.92

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
633.36 1.18 7.12 4.27 1.11 1.94 -0.00203 -2.38 1.81 11.1 49.39 1432 15.8 1.97
643.49 1.18 7.12 4.01 1.08 1.87 0.0401 -- 1.79 10.9 46.78 1437 15.7 1.97
633.32 1.17 7.12 4.28 1.1 1.95 -- -2.39 1.81 11 48.52 1434 15.8 1.96
643.11 1.18 7.14 3.95 1.07 1.86 -- -- 1.78 10.9 50.75 1438 15.8 1.92
709.62 1.24 7.13 4.24 -- 1.94 -- -2 1.83 -- 48.2 1435 15.8 1.95
741.84 1.28 7.13 3.91 1.09 -- 0.427 -- 1.77 11.2 -- -- -- --
742.6 1.28 7.13 3.92 1.09 -- -- -- 1.77 11.1 -- -- -- --
715.52 1.25 7.16 3.96 -- 1.84 -- -- 1.75 -- 46 1440 15.8 1.92
975.75 1.45 7.09 -- 1.12 1.93 -- -- 1.72 11.1 52.54 41796 16 2.04
816.78 1.34 7.16 3.9 -- -- -- -- 1.76 -- -- -- -- --
1148.06 1.58 7.23 -- 1.06 -- -- -- 1.34 10.8 -- -- -- --
954.52 1.44 7.19 -- -- 3.78 -- -- 1.62 -- 36.61 47520 17.6 0.244
1217.37 1.63 7.26 -- -- -- -- -- 1.33 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 634.37 humidity 50 1440 > th dose dependent rect. 16 2
2 635.18 wind 9 14400 > th dose dependent rect. 17 4
3 635.27 humidity 90 1440 < th dose dependent rect. 16 2
4 635.47 wind 9 14400 < th dose independent rect. 17 4
6 635.92 wind 9 14400 > th dose independent rect. 17 4
35 641.59 wind 9 14400 > th dose independent rect. 17 8
74 644.50 wind 9 14400 < th dose independent rect. 17 8
146 648.14 wind 9 14400 > th dose independent rect. 17 17
159 648.48 wind 9 14400 > th dose dependent sin 12 NA
176 648.98 wind 9 14400 < th dose independent rect. 17 13
217 650.02 humidity 50 1440 > th dose dependent rect. 11 8
238 650.39 humidity 50 1440 > th dose dependent rect. 11 10
246 650.55 wind 9 14400 < th dose independent rect. 17 17
248 650.58 humidity 80 1440 < th dose dependent sin 16 NA
300 651.54 humidity 50 1440 > th dose dependent sin 19 NA
341 652.09 wind 7 14400 < th dose independent rect. 15 11
356 652.38 humidity 60 1440 > th dose independent rect. 15 2
388 652.81 humidity 70 1440 < th dose independent rect. 17 2
463 654.18 wind 9 14400 > th dose independent sin 12 NA
480 654.41 wind 7 14400 < th dose independent rect. 14 19
485 654.46 humidity 60 1440 < th dose independent rect. 15 2
594 655.64 humidity 60 1440 > th dose independent rect. 14 15
600 655.69 humidity 60 1440 > th dose independent rect. 14 17
601 655.70 humidity 60 1440 > th dose independent rect. 14 10
609 655.75 humidity 60 1440 > th dose independent rect. 14 6
671 656.26 wind 7 14400 > th dose independent sin 14 NA
706 656.51 humidity 60 1440 < th dose independent rect. 14 6
721 656.53 humidity 70 1440 < th dose independent sin 14 NA
741 656.73 humidity 70 1440 > th dose independent sin 14 NA
772 656.94 wind 9 14400 < th dose independent sin 12 NA
783 657.04 wind 7 14400 < th dose independent sin 15 NA
920 658.28 wind 5 14400 > th dose dependent rect. 14 19