Os01g0297000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description :
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Os01g0297000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description :
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 104.55 | 0.48 | 2.83 | 0.00399 | 0.0361 | -0.746 | 0.249 | 1.24 | 0.254 | 12.4 | 9.1 | 624 | -- | -- |
| 104.6 | 0.476 | 2.84 | 0.0123 | 0.0376 | -1 | 0.247 | -- | 0.248 | 12.6 | 9.2 | 623 | -- | -- |
| 101.08 | 0.472 | 2.87 | 0.0648 | 0.0456 | -3.71 | -- | -7.67 | 0.236 | 14.1 | 9.1 | 629 | -- | -- |
| 104.84 | 0.477 | 2.83 | 0.0273 | 0.0402 | -1.02 | -- | -- | 0.255 | 13.9 | 9.126 | 623 | -- | -- |
| 101.21 | 0.471 | 2.87 | 0.0629 | -- | -3.68 | -- | -7.58 | 0.235 | -- | 9.1 | 629 | -- | -- |
| 108.93 | 0.489 | 2.84 | -0.0717 | 0.0115 | -- | -0.356 | -- | 0.219 | 21.7 | -- | -- | -- | -- |
| 109.27 | 0.49 | 2.84 | -0.0562 | 0.0537 | -- | -- | -- | 0.221 | 16.9 | -- | -- | -- | -- |
| 104.84 | 0.477 | 2.84 | -0.0137 | -- | -0.969 | -- | -- | 0.238 | -- | 11.07 | 607 | -- | -- |
| 104.86 | 0.477 | 2.83 | -- | 0.0392 | -1.01 | -- | -- | 0.251 | 13.9 | 9.125 | 623 | -- | -- |
| 109.42 | 0.489 | 2.84 | -0.0581 | -- | -- | -- | -- | 0.219 | -- | -- | -- | -- | -- |
| 109.35 | 0.489 | 2.84 | -- | 0.0547 | -- | -- | -- | 0.227 | 16.9 | -- | -- | -- | -- |
| 104.85 | 0.477 | 2.84 | -- | -- | -0.972 | -- | -- | 0.24 | -- | 11.24 | 619 | -- | -- |
| 109.51 | 0.488 | 2.84 | -- | -- | -- | -- | -- | 0.226 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 91.81 | wind | 1.0 | 10 | < th | dose dependent | rect. | 9 | 1 |
| 3 | 92.35 | radiation | 10.0 | 10 | < th | dose independent | rect. | 9 | 1 |
| 7 | 92.54 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 10 | 1 |
| 11 | 92.77 | wind | 1.0 | 30 | < th | dose independent | rect. | 9 | 1 |
| 40 | 97.44 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 10 | 1 |
| 53 | 99.96 | wind | 9.0 | 10 | > th | dose independent | rect. | 19 | 16 |
| 54 | 100.04 | wind | 7.0 | 30 | > th | dose independent | rect. | 19 | 3 |
| 89 | 100.52 | wind | 7.0 | 90 | > th | dose dependent | rect. | 19 | 2 |
| 101 | 100.73 | wind | 5.0 | 10 | > th | dose dependent | rect. | 19 | 3 |
| 164 | 101.28 | wind | 9.0 | 10 | > th | dose dependent | rect. | 19 | 16 |
| 168 | 101.36 | humidity | 80.0 | 10 | > th | dose independent | rect. | 9 | 1 |
| 336 | 102.51 | wind | 7.0 | 30 | > th | dose independent | sin | 11 | NA |
| 399 | 102.93 | wind | 9.0 | 720 | < th | dose independent | rect. | 10 | 15 |
| 402 | 102.95 | wind | 7.0 | 30 | < th | dose independent | sin | 11 | NA |
| 450 | 103.39 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 5 | 1 |
| 473 | 103.54 | radiation | 40.0 | 10 | > th | dose dependent | rect. | 12 | 23 |
| 499 | 103.72 | wind | 9.0 | 720 | < th | dose independent | rect. | 2 | 23 |
| 523 | 103.88 | wind | 9.0 | 720 | < th | dose independent | rect. | 13 | 9 |
| 526 | 103.89 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 5 | 1 |
| 541 | 103.98 | wind | 9.0 | 1440 | > th | dose independent | rect. | 19 | 1 |
| 542 | 103.98 | wind | 9.0 | 1440 | > th | dose dependent | rect. | 19 | 1 |
| 567 | 104.14 | radiation | 40.0 | 10 | > th | dose independent | rect. | 12 | 22 |
| 573 | 104.15 | wind | 9.0 | 720 | < th | dose independent | rect. | 2 | 15 |
| 622 | 104.33 | wind | 9.0 | 720 | < th | dose independent | rect. | 10 | 23 |
| 650 | 104.42 | radiation | 40.0 | 10 | > th | dose dependent | sin | 12 | NA |
| 655 | 104.43 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 15 | 1 |
| 656 | 104.43 | humidity | 70.0 | 720 | > th | dose independent | rect. | 3 | 6 |
| 657 | 104.43 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 15 | 1 |
| 660 | 104.45 | humidity | 60.0 | 10 | < th | dose independent | rect. | 10 | 1 |
| 663 | 104.45 | humidity | 60.0 | 10 | < th | dose dependent | rect. | 10 | 1 |
| 670 | 104.48 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 672 | 104.48 | wind | 9.0 | 720 | < th | dose independent | rect. | 19 | 23 |
| 673 | 104.48 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 15 | 1 |
| 737 | 104.56 | wind | 7.0 | 30 | < th | dose independent | rect. | 13 | 11 |
| 738 | 104.56 | wind | 7.0 | 30 | > th | dose independent | rect. | 16 | 19 |
| 793 | 104.57 | wind | 9.0 | 720 | > th | dose dependent | rect. | 11 | 5 |
| 794 | 104.58 | wind | 9.0 | 720 | > th | dose independent | rect. | 11 | 5 |
| 831 | 104.63 | wind | 7.0 | 720 | < th | dose independent | rect. | 13 | 2 |
| 880 | 104.66 | wind | 7.0 | 30 | > th | dose independent | rect. | 16 | 10 |
| 890 | 104.67 | wind | 7.0 | 30 | > th | dose independent | rect. | 16 | 6 |
| 928 | 104.74 | wind | 7.0 | 720 | < th | dose independent | rect. | 10 | 7 |
| 943 | 104.75 | wind | 9.0 | 720 | < th | dose independent | rect. | 5 | 17 |
| 946 | 104.76 | wind | 9.0 | 720 | < th | dose independent | rect. | 13 | 18 |
| 994 | 104.82 | wind | 9.0 | 720 | > th | dose independent | sin | 1 | NA |