Os01g0296700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycoside hydrolase, family 3, N-terminal domain containing protein.
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Os01g0296700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycoside hydrolase, family 3, N-terminal domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 414.11 | 0.956 | 3.63 | -2.64 | 0.388 | 1.93 | -0.322 | -9.9 | -0.118 | 8.46 | 31.8 | 1260 | -- | -- |
| 418.25 | 0.953 | 3.46 | -1.06 | 0.466 | 0.822 | -0.17 | -- | -0.175 | 7.97 | 32.77 | 1050 | -- | -- |
| 414.3 | 0.948 | 3.63 | -2.7 | 0.393 | 1.96 | -- | -10.2 | -0.122 | 8.05 | 32 | 1282 | -- | -- |
| 417.81 | 0.952 | 3.44 | -1.03 | 0.421 | 0.845 | -- | -- | -0.129 | 8.23 | 33.1 | 1040 | -- | -- |
| 422.68 | 0.958 | 3.64 | -2.67 | -- | 1.93 | -- | -10.1 | -0.118 | -- | 32.18 | 1293 | -- | -- |
| 449.26 | 0.994 | 3.48 | -0.869 | 0.372 | -- | 0.229 | -- | -0.267 | 6.59 | -- | -- | -- | -- |
| 449.3 | 0.993 | 3.48 | -0.865 | 0.373 | -- | -- | -- | -0.267 | 6.98 | -- | -- | -- | -- |
| 425.49 | 0.961 | 3.45 | -1.06 | -- | 0.793 | -- | -- | -0.113 | -- | 31.51 | 1293 | -- | -- |
| 445.59 | 0.983 | 3.43 | -- | 0.387 | 0.726 | -- | -- | -0.0428 | 8.31 | 33.5 | 1029 | -- | -- |
| 456.63 | 0.999 | 3.48 | -0.857 | -- | -- | -- | -- | -0.261 | -- | -- | -- | -- | -- |
| 469 | 1.01 | 3.45 | -- | 0.364 | -- | -- | -- | -0.171 | 7.13 | -- | -- | -- | -- |
| 453.66 | 0.992 | 3.43 | -- | -- | 0.697 | -- | -- | -0.0444 | -- | 33.6 | 1030 | -- | -- |
| 476 | 1.02 | 3.46 | -- | -- | -- | -- | -- | -0.166 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 403.28 | humidity | 50 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 2 | 403.37 | humidity | 50 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 3 | 404.18 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 5 | 406.27 | temperature | 30 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 19 | 406.52 | temperature | 30 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 33 | 406.72 | temperature | 25 | 720 | > th | dose dependent | rect. | 21 | 1 |
| 36 | 407.21 | wind | 1 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 37 | 408.17 | wind | 1 | 90 | < th | dose independent | rect. | 4 | 1 |
| 58 | 409.52 | radiation | 1 | 720 | > th | dose dependent | rect. | 18 | 11 |
| 63 | 410.98 | humidity | 70 | 720 | < th | dose dependent | rect. | 18 | 1 |
| 64 | 411.04 | radiation | 1 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 74 | 411.19 | humidity | 60 | 720 | < th | dose independent | rect. | 18 | 1 |
| 117 | 411.54 | radiation | 30 | 1440 | > th | dose independent | rect. | 16 | 16 |
| 118 | 411.57 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 4 |
| 120 | 411.66 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 7 |
| 122 | 411.67 | humidity | 50 | 4320 | < th | dose dependent | rect. | 16 | 18 |
| 126 | 411.69 | humidity | 50 | 4320 | < th | dose independent | rect. | 16 | 18 |
| 196 | 411.86 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 10 |
| 198 | 411.88 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 12 |
| 204 | 412.03 | radiation | 1 | 720 | > th | dose independent | rect. | 18 | 11 |
| 205 | 412.04 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 17 |
| 250 | 412.91 | temperature | 30 | 720 | > th | dose independent | rect. | 18 | 1 |
| 275 | 413.27 | radiation | 1 | 720 | > th | dose independent | rect. | 18 | 1 |
| 298 | 413.34 | temperature | 30 | 720 | < th | dose independent | rect. | 18 | 8 |
| 465 | 414.32 | radiation | 30 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 483 | 414.37 | temperature | 25 | 720 | > th | dose dependent | sin | 11 | NA |
| 491 | 414.48 | radiation | 30 | 1440 | > th | dose independent | rect. | 7 | 1 |
| 537 | 414.69 | humidity | 50 | 1440 | < th | dose independent | sin | 11 | NA |
| 599 | 415.07 | radiation | 20 | 1440 | > th | dose dependent | rect. | 16 | 16 |
| 604 | 415.12 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 2 |
| 606 | 415.13 | temperature | 25 | 720 | > th | dose independent | rect. | 21 | 3 |
| 621 | 415.17 | atmosphere | 1005 | 30 | > th | dose independent | rect. | 2 | 7 |
| 623 | 415.20 | temperature | 30 | 1440 | > th | dose dependent | rect. | 16 | 3 |
| 637 | 415.20 | temperature | 30 | 1440 | > th | dose dependent | rect. | 16 | 19 |
| 642 | 415.29 | radiation | 40 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 700 | 415.48 | humidity | 50 | 4320 | > th | dose independent | sin | 12 | NA |
| 725 | 415.54 | radiation | 30 | 4320 | < th | dose independent | rect. | 6 | 2 |
| 740 | 415.56 | temperature | 30 | 720 | < th | dose independent | rect. | 18 | 1 |
| 749 | 415.64 | radiation | 20 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 763 | 415.64 | humidity | 50 | 4320 | < th | dose independent | rect. | 16 | 22 |
| 786 | 415.69 | humidity | 50 | 4320 | > th | dose independent | rect. | 13 | 4 |
| 830 | 415.79 | humidity | 70 | 720 | > th | dose independent | rect. | 19 | 8 |
| 848 | 415.83 | radiation | 20 | 1440 | < th | dose dependent | rect. | 18 | 9 |