Os01g0296100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Shaggy-related protein kinase alpha (EC 2.7.1.-) (ASK-alpha).
FiT-DB / Search/ Help/ Sample detail
|
Os01g0296100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Shaggy-related protein kinase alpha (EC 2.7.1.-) (ASK-alpha).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 28.02 | 0.249 | 11.6 | 0.399 | 0.848 | -0.716 | 0.542 | -0.207 | 0.484 | 1.95 | 79.84 | 1392 | -- | -- |
| 27.68 | 0.245 | 11.6 | 0.434 | 0.859 | -0.744 | 0.558 | -- | 0.478 | 1.94 | 78.65 | 1382 | -- | -- |
| 29.13 | 0.251 | 11.6 | 0.386 | 0.855 | -0.699 | -- | -0.158 | 0.481 | 2 | 79.95 | 1379 | -- | -- |
| 28.83 | 0.25 | 11.6 | 0.412 | 0.856 | -0.73 | -- | -- | 0.476 | 2.01 | 78.17 | 1379 | -- | -- |
| 40.82 | 0.299 | 11.6 | 0.416 | -- | -0.549 | -- | -0.386 | 0.467 | -- | 79.95 | 1379 | -- | -- |
| 34.5 | 0.275 | 11.7 | 0.391 | 0.82 | -- | 0.459 | -- | 0.445 | 1.86 | -- | -- | -- | -- |
| 35.31 | 0.278 | 11.7 | 0.377 | 0.821 | -- | -- | -- | 0.442 | 1.91 | -- | -- | -- | -- |
| 40.9 | 0.299 | 11.7 | 0.46 | -- | -0.562 | -- | -- | 0.44 | -- | 78.17 | 1379 | -- | -- |
| 33.26 | 0.269 | 11.7 | -- | 0.86 | -0.689 | -- | -- | 0.428 | 2.01 | 78.55 | 1382 | -- | -- |
| 76 | 0.407 | 11.6 | 0.411 | -- | -- | -- | -- | 0.461 | -- | -- | -- | -- | -- |
| 39.05 | 0.292 | 11.7 | -- | 0.828 | -- | -- | -- | 0.4 | 1.92 | -- | -- | -- | -- |
| 46.47 | 0.319 | 11.7 | -- | -- | -0.552 | -- | -- | 0.39 | -- | 78.17 | 1379 | -- | -- |
| 80.45 | 0.419 | 11.7 | -- | -- | -- | -- | -- | 0.415 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 27.52 | humidity | 70 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 2 | 27.55 | humidity | 80 | 1440 | < th | dose independent | rect. | 23 | 21 |
| 3 | 27.56 | humidity | 80 | 1440 | > th | dose independent | rect. | 10 | 4 |
| 6 | 27.60 | humidity | 80 | 1440 | > th | dose independent | sin | 1 | NA |
| 8 | 27.61 | humidity | 80 | 1440 | < th | dose independent | sin | 1 | NA |
| 9 | 27.63 | humidity | 80 | 1440 | < th | dose independent | rect. | 10 | 4 |
| 11 | 27.63 | humidity | 80 | 1440 | > th | dose independent | rect. | 24 | 21 |
| 19 | 27.66 | humidity | 70 | 1440 | > th | dose dependent | rect. | 10 | 4 |
| 20 | 27.67 | humidity | 80 | 1440 | > th | dose independent | rect. | 3 | 18 |
| 21 | 27.68 | humidity | 80 | 1440 | < th | dose independent | rect. | 5 | 15 |
| 37 | 27.75 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 44 | 27.78 | humidity | 80 | 1440 | < th | dose independent | rect. | 1 | 15 |
| 45 | 27.78 | humidity | 80 | 1440 | < th | dose independent | rect. | 24 | 17 |
| 48 | 27.79 | humidity | 80 | 1440 | > th | dose independent | rect. | 3 | 13 |
| 50 | 27.79 | humidity | 80 | 1440 | > th | dose independent | rect. | 1 | 15 |
| 55 | 27.80 | humidity | 80 | 1440 | < th | dose independent | rect. | 3 | 13 |
| 61 | 27.82 | humidity | 80 | 1440 | > th | dose independent | rect. | 5 | 11 |
| 62 | 27.82 | humidity | 80 | 1440 | < th | dose independent | rect. | 5 | 11 |
| 85 | 27.86 | humidity | 80 | 1440 | < th | dose independent | rect. | 8 | 7 |
| 158 | 27.96 | humidity | 70 | 1440 | > th | dose dependent | rect. | 9 | 6 |
| 169 | 28.00 | humidity | 80 | 1440 | < th | dose independent | rect. | 19 | 22 |
| 182 | 28.02 | humidity | 50 | 720 | > th | dose dependent | rect. | 9 | 20 |
| 189 | 28.04 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 19 |
| 206 | 28.07 | humidity | 70 | 1440 | > th | dose dependent | rect. | 8 | 12 |
| 224 | 28.10 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 8 |
| 239 | 28.12 | humidity | 80 | 1440 | < th | dose independent | no | NA | NA |
| 282 | 28.17 | humidity | 80 | 1440 | > th | dose independent | rect. | 19 | 23 |
| 283 | 28.17 | humidity | 50 | 720 | > th | dose dependent | rect. | 24 | 21 |
| 294 | 28.19 | humidity | 70 | 1440 | > th | dose independent | rect. | 13 | 5 |
| 306 | 28.20 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 19 |
| 312 | 28.20 | humidity | 80 | 1440 | < th | dose independent | rect. | 13 | 23 |
| 313 | 28.20 | humidity | 70 | 1440 | > th | dose dependent | sin | 23 | NA |
| 330 | 28.22 | humidity | 80 | 1440 | > th | dose independent | rect. | 17 | 23 |
| 348 | 28.25 | humidity | 80 | 1440 | > th | dose independent | no | NA | NA |
| 362 | 28.26 | humidity | 80 | 1440 | < th | dose independent | rect. | 10 | 23 |
| 388 | 28.30 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 13 |
| 390 | 28.30 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 18 |
| 423 | 28.34 | humidity | 80 | 1440 | > th | dose independent | rect. | 13 | 23 |
| 488 | 28.41 | humidity | 80 | 720 | < th | dose dependent | rect. | 12 | 17 |
| 493 | 28.42 | humidity | 70 | 1440 | < th | dose independent | rect. | 13 | 5 |
| 513 | 28.43 | humidity | 70 | 1440 | > th | dose independent | sin | 19 | NA |
| 568 | 28.46 | humidity | 90 | 1440 | < th | dose dependent | rect. | 1 | 19 |
| 577 | 28.47 | humidity | 80 | 720 | < th | dose dependent | rect. | 14 | 16 |
| 706 | 28.55 | humidity | 90 | 1440 | < th | dose dependent | rect. | 9 | 11 |
| 771 | 28.58 | humidity | 90 | 1440 | < th | dose dependent | sin | 23 | NA |
| 898 | 28.63 | humidity | 90 | 1440 | < th | dose dependent | rect. | 9 | 21 |
| 923 | 28.64 | humidity | 90 | 1440 | < th | dose dependent | rect. | 17 | 23 |
| 939 | 28.65 | humidity | 50 | 720 | > th | dose dependent | rect. | 13 | 16 |
| 951 | 28.66 | humidity | 80 | 720 | < th | dose dependent | sin | 15 | NA |