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Os01g0291500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Transferase family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.44 (0.0656) R2 : 0.658
β1 : 0.603 (0.236) R2dD : 0.00704 R2D : -0.0679
β2 : 2.24 (0.131) R2dC : 0.223 R2C : 0.223
β3 : 4.68 (0.371) R2dE : 0.305 R2E : -0.096
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : 11.1 (1.22) R2dD*E : 0.158 R2D*E : -0.137
γ1 : 2.2 (0.124) R2dN8 : 0.356 R2N8 : 0.263
σ : 1.03
deviance : 484.47
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C
peak time of C : 11.1
E
wheather : wind
threshold : 5.056
memory length : 6597
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 8.02
open length of G : 1.23

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
485.06 1.03 6.44 0.597 2.24 4.66 -0.069 11.1 2.22 11.1 4.934 6646 8.02 1.21
655.52 1.19 6.32 1.1 2.37 4.6 -0.389 -- 2.31 10.8 4.236 6616 8.07 1.72
484.47 1.03 6.44 0.603 2.24 4.68 -- 11.1 2.2 11.1 5.056 6597 8.02 1.23
643.66 1.18 6.3 1.27 2.25 4.45 -- -- 2.39 10.8 3.993 6612 8.03 1.78
789.81 1.31 6.45 0.623 -- 4.89 -- 11.1 2.21 -- 4.9 6266 8.02 1.22
663.04 1.21 6.19 -0.695 2.35 -- 0.196 -- 2.15 11.3 -- -- -- --
663.2 1.21 6.19 -0.687 2.35 -- -- -- 2.15 11.3 -- -- -- --
912.57 1.41 6.15 0.75 -- 3.81 -- -- 2.24 -- 4.2 6251 8.27 1.35
622.53 1.16 6.36 -- 2.51 2.44 -- -- 2.32 11.1 4.383 6532 7.57 2.2
1009.1 1.48 6.25 -0.747 -- -- -- -- 2.12 -- -- -- -- --
675.66 1.22 6.17 -- 2.36 -- -- -- 2.22 11.3 -- -- -- --
911.79 1.41 6.28 -- -- 2.72 -- -- 2.26 -- 4.322 6273 7.37 2.25
1023.81 1.49 6.23 -- -- -- -- -- 2.21 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 488.78 precipitation 0.1 43200 > th dose dependent rect. 20 1
2 494.58 precipitation 0.1 43200 > th dose independent rect. 20 1
3 495.72 precipitation 0.1 43200 < th dose independent rect. 20 1
4 495.72 precipitation 0.1 43200 < th dose dependent rect. 20 1
5 497.65 humidity 50.0 14400 < th dose independent rect. 16 20
6 498.63 precipitation 0.1 43200 > th dose dependent rect. 17 5
15 503.18 humidity 60.0 14400 < th dose dependent rect. 17 17
18 503.32 humidity 50.0 14400 > th dose independent rect. 16 20
22 504.23 humidity 50.0 14400 > th dose independent sin 11 NA
27 505.22 precipitation 0.1 43200 > th dose dependent rect. 19 3
28 505.61 precipitation 0.1 43200 > th dose dependent rect. 14 4
29 505.68 precipitation 0.1 43200 < th dose independent rect. 17 4
30 505.68 precipitation 0.1 43200 < th dose dependent rect. 17 4
33 506.08 precipitation 0.1 43200 > th dose independent rect. 17 4
49 507.60 precipitation 0.1 43200 > th dose dependent rect. 12 6
53 508.16 precipitation 0.1 43200 < th dose independent rect. 15 3
54 508.16 precipitation 0.1 43200 < th dose dependent rect. 15 3
56 508.58 precipitation 0.1 43200 > th dose independent rect. 15 3
60 508.94 precipitation 0.1 43200 > th dose dependent sin 17 NA
96 511.71 precipitation 0.1 43200 < th dose independent rect. 17 2
97 511.71 precipitation 0.1 43200 < th dose dependent rect. 17 2
100 512.05 radiation 10.0 43200 > th dose independent rect. 7 2
103 512.16 radiation 10.0 43200 > th dose independent rect. 5 5
116 512.40 precipitation 0.1 43200 > th dose independent rect. 17 2
124 512.62 humidity 50.0 14400 < th dose independent sin 12 NA
184 514.67 radiation 10.0 43200 > th dose independent sin 9 NA
238 517.05 humidity 90.0 14400 > th dose dependent rect. 3 3
257 518.28 precipitation 0.1 43200 < th dose independent rect. 13 11
258 518.28 precipitation 0.1 43200 < th dose dependent rect. 13 11
275 518.68 radiation 20.0 43200 > th dose independent rect. 10 1
284 518.86 wind 9.0 43200 > th dose independent rect. 16 2
288 519.00 wind 9.0 43200 < th dose independent rect. 16 2
317 519.51 precipitation 0.1 43200 > th dose dependent rect. 16 1
335 519.94 radiation 20.0 43200 < th dose dependent rect. 9 5
348 520.53 radiation 30.0 43200 < th dose dependent rect. 10 1
362 520.91 humidity 50.0 14400 < th dose independent rect. 15 2
389 521.42 precipitation 0.1 43200 < th dose independent sin 17 NA
390 521.42 precipitation 0.1 43200 < th dose dependent sin 17 NA
396 521.50 precipitation 0.1 43200 > th dose independent sin 17 NA
426 522.24 wind 9.0 43200 > th dose dependent rect. 15 2
443 522.71 radiation 20.0 43200 > th dose independent rect. 9 4
446 522.88 humidity 50.0 14400 > th dose independent rect. 14 10
447 522.90 humidity 50.0 14400 > th dose independent rect. 14 14
482 523.35 humidity 50.0 14400 > th dose independent rect. 15 2
484 523.39 radiation 10.0 43200 < th dose independent rect. 10 1
492 523.44 humidity 70.0 43200 > th dose independent rect. 10 3
515 523.56 humidity 50.0 14400 < th dose dependent rect. 16 20
516 523.65 humidity 50.0 14400 < th dose independent rect. 15 18
519 523.81 wind 9.0 43200 < th dose independent rect. 14 16
553 524.45 humidity 70.0 43200 > th dose independent rect. 11 1
557 524.55 wind 9.0 43200 > th dose independent rect. 14 16
559 524.56 humidity 50.0 14400 > th dose independent rect. 17 17
568 524.68 humidity 60.0 14400 < th dose dependent rect. 17 3
606 525.33 radiation 10.0 43200 < th dose dependent rect. 12 2
648 526.01 humidity 70.0 43200 < th dose independent rect. 11 2
649 526.05 humidity 50.0 14400 < th dose independent rect. 14 4
667 526.09 wind 9.0 43200 > th dose dependent rect. 14 6
804 527.74 humidity 60.0 14400 < th dose dependent rect. 12 1
817 528.01 humidity 70.0 43200 < th dose independent rect. 10 4
820 528.04 radiation 10.0 14400 < th dose independent rect. 12 1
822 528.16 wind 9.0 43200 > th dose dependent rect. 11 1
829 528.27 radiation 10.0 43200 > th dose independent rect. 16 22
836 528.40 wind 9.0 43200 < th dose independent rect. 11 1
899 528.89 wind 9.0 43200 < th dose independent rect. 14 6
900 528.89 wind 9.0 43200 < th dose independent rect. 14 10
902 528.91 radiation 1.0 43200 > th dose dependent rect. 10 1
903 528.96 wind 9.0 43200 < th dose independent rect. 14 12
931 529.40 wind 9.0 43200 > th dose dependent rect. 14 16
962 529.71 wind 9.0 43200 > th dose independent rect. 14 6
963 529.71 wind 9.0 43200 > th dose independent rect. 14 12
975 529.87 radiation 10.0 14400 > th dose dependent rect. 7 1
987 529.97 humidity 60.0 14400 < th dose dependent sin 11 NA
992 530.05 wind 7.0 43200 > th dose dependent rect. 16 14