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Os01g0289900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Transferase family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.85 (0.061) R2 : 0.678
β1 : -0.934 (0.289) R2dD : 0.0192 R2D : 0.114
β2 : 1.52 (0.13) R2dC : 0.0979 R2C : 0.0617
β3 : -1.83 (0.151) R2dE : 0.166 R2E : 0.345
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : 4.95 (0.607) R2dD*E : 0.13 R2D*E : 0.337
γ1 : -0.509 (0.135) R2dN8 : 0.0218 R2N8 : 0.0559
σ : 0.932
deviance : 400.19
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C
peak time of C : 7.29
E
wheather : temperature
threshold : 19.8
memory length : 4154
response mode : > th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 23.5
open length of G : 1.97

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
400.42 0.94 6.85 -0.949 1.49 -1.83 0.724 4.91 -0.499 7.23 20.03 4180 23.2 1.56
441.93 0.979 6.91 -1.12 1.33 -2.56 0.675 -- -0.459 7.2 19.59 21364 23.9 2.46
400.19 0.932 6.85 -0.934 1.52 -1.83 -- 4.95 -0.509 7.29 19.8 4154 23.5 1.97
428.99 0.965 6.99 -0.576 1.43 -3.45 -- -- -0.507 7.06 18.84 18410 23.6 3.01
512.79 1.05 6.87 -0.895 -- -1.66 -- 5.35 -0.401 -- 19.9 4263 23.7 0.849
612.44 1.16 7.3 -3.92 1.3 -- 1.6 -- -1.77 7.16 -- -- -- --
619.19 1.17 7.3 -3.89 1.31 -- -- -- -1.77 7.12 -- -- -- --
522.85 1.06 7.02 -0.616 -- -3.35 -- -- -0.515 -- 18.8 20079 23.4 3.18
430.51 0.966 7 -- 1.41 -3.59 -- -- -0.469 7.42 18.8 19991 23.2 2.8
709.51 1.24 7.33 -3.86 -- -- -- -- -1.75 -- -- -- -- --
1017.75 1.49 7.2 -- 1.27 -- -- -- -1.34 7.31 -- -- -- --
522.97 1.07 7.05 -- -- -3.52 -- -- -0.403 -- 18.78 21521 23.4 3.29
1103.31 1.55 7.23 -- -- -- -- -- -1.32 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 406.19 wind 3 43200 < th dose dependent rect. 8 1
2 407.10 radiation 1 43200 < th dose dependent rect. 19 10
3 407.15 radiation 1 43200 < th dose dependent rect. 23 6
8 408.56 wind 1 43200 < th dose dependent rect. 23 3
9 409.35 humidity 90 14400 > th dose dependent rect. 2 14
12 410.11 temperature 20 4320 > th dose independent rect. 23 1
14 410.29 temperature 20 4320 < th dose independent rect. 23 1
15 410.58 temperature 20 4320 > th dose independent rect. 22 3
16 410.68 humidity 90 14400 > th dose dependent rect. 22 19
17 410.94 radiation 1 43200 < th dose dependent rect. 4 1
22 411.05 temperature 20 4320 < th dose independent rect. 22 3
51 413.00 humidity 90 14400 > th dose dependent sin 4 NA
77 414.37 humidity 90 14400 > th dose dependent rect. 4 4
125 417.36 humidity 90 14400 > th dose dependent rect. 10 21
143 418.10 humidity 90 14400 > th dose dependent rect. 23 1
161 418.69 radiation 1 43200 > th dose independent rect. 18 1
184 419.20 humidity 90 14400 > th dose dependent rect. 21 10
196 419.60 temperature 20 4320 > th dose independent rect. 1 1
221 420.41 radiation 1 43200 < th dose independent rect. 18 7
237 420.70 radiation 1 43200 < th dose independent rect. 18 3
258 421.13 wind 1 43200 < th dose independent rect. 23 3
296 422.16 wind 3 43200 < th dose independent rect. 9 1
324 423.02 humidity 90 14400 > th dose dependent no NA NA
327 423.04 wind 3 43200 > th dose independent rect. 9 1
334 423.16 humidity 90 14400 > th dose dependent rect. 14 23
376 423.94 humidity 90 14400 > th dose dependent rect. 2 23
386 424.23 radiation 20 43200 < th dose independent rect. 8 1
414 424.64 radiation 1 14400 < th dose dependent rect. 6 1
424 424.85 temperature 20 4320 > th dose independent sin 12 NA
426 424.91 temperature 20 1440 > th dose dependent rect. 3 6
460 425.84 temperature 20 1440 > th dose dependent rect. 5 3
484 426.43 temperature 20 4320 < th dose independent sin 12 NA
489 426.58 humidity 90 14400 > th dose dependent rect. 4 23
502 426.90 radiation 1 14400 > th dose independent rect. 18 13
504 426.92 temperature 15 43200 < th dose dependent rect. 1 1
519 427.26 humidity 90 14400 > th dose dependent rect. 22 5
530 427.47 temperature 20 1440 > th dose dependent rect. 21 12
538 427.63 humidity 90 14400 > th dose independent rect. 22 17
571 428.46 humidity 90 14400 > th dose independent rect. 22 2
600 429.12 humidity 60 43200 > th dose independent rect. 20 16
602 429.18 radiation 1 14400 > th dose independent rect. 6 1
611 429.27 radiation 1 14400 < th dose independent rect. 6 1
650 430.04 humidity 70 43200 < th dose dependent rect. 19 13
654 430.07 radiation 20 43200 < th dose independent rect. 2 8
660 430.09 radiation 20 43200 < th dose independent rect. 4 6
666 430.11 radiation 20 43200 < th dose independent rect. 21 13
672 430.12 radiation 20 43200 < th dose independent rect. 18 16
717 430.81 temperature 15 43200 < th dose dependent rect. 23 4
766 431.51 radiation 40 43200 < th dose independent rect. 10 1
773 431.60 humidity 50 43200 < th dose independent rect. 7 3
788 431.76 humidity 60 43200 > th dose independent rect. 24 12
815 432.03 humidity 60 43200 < th dose dependent rect. 7 1
863 432.46 radiation 40 43200 > th dose dependent rect. 12 1
899 432.75 radiation 30 43200 < th dose independent rect. 16 20
929 432.90 temperature 20 4320 > th dose dependent rect. 17 6
940 432.99 humidity 60 43200 < th dose independent rect. 18 15
966 433.25 humidity 90 14400 > th dose independent sin 7 NA
973 433.31 radiation 20 43200 < th dose independent sin 10 NA