Os01g0289600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0289600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 266.16 | 0.767 | 7.3 | 5.38 | 0.616 | -3.15 | -0.287 | 3.65 | 1.65 | 6.87 | 20.95 | 1496 | -- | -- |
| 282.88 | 0.783 | 7.41 | 4.65 | 0.56 | -3.32 | 0.0489 | -- | 1.45 | 6.69 | 18.58 | 5454 | -- | -- |
| 266.12 | 0.76 | 7.3 | 5.44 | 0.614 | -3.14 | -- | 3.9 | 1.66 | 6.73 | 21.32 | 1495 | -- | -- |
| 272.54 | 0.769 | 7.37 | 5.1 | 0.594 | -4.24 | -- | -- | 1.57 | 6.47 | 12.86 | 5491 | -- | -- |
| 271.25 | 0.767 | 7.31 | 5.53 | -- | -3.44 | -- | 4.42 | 1.67 | -- | 21.56 | 1940 | -- | -- |
| 565.31 | 1.11 | 7.6 | 3.17 | 0.588 | -- | -0.573 | -- | 0.632 | 7.79 | -- | -- | -- | -- |
| 566.2 | 1.11 | 7.6 | 3.16 | 0.592 | -- | -- | -- | 0.632 | 7.6 | -- | -- | -- | -- |
| 285.61 | 0.787 | 7.39 | 5.23 | -- | -4.22 | -- | -- | 1.64 | -- | 11.58 | 6426 | -- | -- |
| 703.98 | 1.24 | 7.6 | -- | 0.645 | -2.05 | -- | -- | 0.636 | 4.12 | 22.01 | 1068 | -- | -- |
| 584.99 | 1.13 | 7.61 | 3.17 | -- | -- | -- | -- | 0.641 | -- | -- | -- | -- | -- |
| 829.19 | 1.35 | 7.68 | -- | 0.62 | -- | -- | -- | 0.281 | 7.25 | -- | -- | -- | -- |
| 713.08 | 1.24 | 7.62 | -- | -- | -2.15 | -- | -- | 0.596 | -- | 21.8 | 761 | -- | -- |
| 849.59 | 1.36 | 7.69 | -- | -- | -- | -- | -- | 0.29 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 262.03 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 12 |
| 7 | 262.74 | temperature | 20 | 1440 | > th | dose dependent | sin | 19 | NA |
| 9 | 263.02 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 10 |
| 92 | 265.95 | radiation | 10 | 14400 | < th | dose independent | rect. | 16 | 14 |
| 159 | 267.40 | temperature | 20 | 1440 | > th | dose dependent | rect. | 10 | 22 |
| 270 | 268.47 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 323 | 269.10 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 366 | 269.81 | wind | 5 | 43200 | > th | dose independent | rect. | 10 | 2 |
| 385 | 270.03 | radiation | 10 | 14400 | > th | dose dependent | rect. | 17 | 13 |
| 398 | 270.23 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 23 |
| 401 | 270.27 | radiation | 10 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 412 | 270.38 | wind | 5 | 43200 | < th | dose independent | rect. | 10 | 2 |
| 453 | 270.94 | wind | 5 | 43200 | > th | dose independent | rect. | 5 | 10 |
| 474 | 271.23 | wind | 5 | 43200 | > th | dose independent | rect. | 9 | 5 |
| 519 | 271.89 | wind | 5 | 43200 | < th | dose independent | rect. | 9 | 4 |
| 530 | 272.09 | humidity | 90 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 536 | 272.15 | wind | 5 | 43200 | < th | dose independent | rect. | 5 | 10 |
| 567 | 272.57 | wind | 5 | 43200 | < th | dose independent | rect. | 8 | 6 |
| 573 | 272.68 | wind | 5 | 43200 | > th | dose independent | rect. | 20 | 20 |
| 605 | 273.22 | wind | 5 | 43200 | < th | dose independent | rect. | 20 | 20 |
| 608 | 273.26 | wind | 7 | 43200 | < th | dose independent | rect. | 17 | 21 |
| 617 | 273.36 | wind | 5 | 43200 | > th | dose dependent | rect. | 19 | 20 |
| 621 | 273.44 | wind | 7 | 43200 | > th | dose independent | rect. | 17 | 21 |
| 685 | 274.25 | radiation | 10 | 14400 | < th | dose independent | rect. | 16 | 11 |
| 687 | 274.26 | radiation | 10 | 14400 | < th | dose independent | rect. | 16 | 7 |
| 688 | 274.26 | radiation | 10 | 14400 | < th | dose independent | rect. | 16 | 9 |
| 733 | 274.49 | wind | 5 | 43200 | > th | dose dependent | rect. | 17 | 22 |
| 747 | 274.61 | wind | 5 | 43200 | > th | dose independent | sin | 3 | NA |
| 765 | 274.73 | radiation | 1 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 778 | 274.75 | radiation | 1 | 14400 | < th | dose independent | rect. | 17 | 18 |
| 806 | 275.09 | radiation | 10 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 830 | 275.29 | radiation | 1 | 14400 | > th | dose independent | rect. | 17 | 13 |
| 872 | 275.82 | wind | 5 | 43200 | < th | dose independent | sin | 3 | NA |
| 882 | 275.97 | wind | 5 | 43200 | > th | dose independent | rect. | 24 | 16 |
| 887 | 276.04 | humidity | 90 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 900 | 276.19 | radiation | 1 | 14400 | > th | dose independent | rect. | 17 | 18 |
| 928 | 276.45 | radiation | 20 | 14400 | < th | dose dependent | rect. | 18 | 11 |
| 946 | 276.60 | humidity | 90 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 968 | 276.85 | wind | 5 | 43200 | < th | dose independent | rect. | 24 | 16 |
| 988 | 277.12 | humidity | 90 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 992 | 277.21 | humidity | 90 | 43200 | < th | dose independent | rect. | 20 | 3 |