Os01g0288200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0288200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 75.5 | 0.405 | -559 | 3430 | 0.117 | -164000 | -0.45 | 1e+06 | 0.171 | 3.48 | 995 | 10 | -- | -- |
| 71.34 | 0.396 | 2.91 | 0.0276 | 0.118 | 6.03 | -0.449 | -- | 0.17 | 3.45 | 995 | 10 | -- | -- |
| 76.01 | 0.406 | -557 | 3420 | 0.12 | -164000 | -- | 1e+06 | 0.174 | 4.09 | 995 | 10 | -- | -- |
| 70.88 | 0.392 | 2.9 | 0.036 | 0.112 | 6.39 | -- | -- | 0.171 | 3.96 | 994.8 | 10 | -- | -- |
| 76.45 | 0.407 | -551 | 3390 | -- | -164000 | -- | 1e+06 | 0.173 | -- | 995 | 10 | -- | -- |
| 111.16 | 0.494 | 2.91 | 0.0694 | 0.0503 | -- | -0.643 | -- | 0.153 | 3.48 | -- | -- | -- | -- |
| 112.44 | 0.497 | 2.91 | 0.0807 | 0.047 | -- | -- | -- | 0.157 | 2.75 | -- | -- | -- | -- |
| 71.59 | 0.394 | 2.9 | 0.0441 | -- | 6.34 | -- | -- | 0.174 | -- | 994.8 | 10 | -- | -- |
| 70.92 | 0.392 | 2.9 | -- | 0.111 | 6.4 | -- | -- | 0.168 | 3.92 | 994.8 | 10 | -- | -- |
| 112.57 | 0.496 | 2.91 | 0.0827 | -- | -- | -- | -- | 0.158 | -- | -- | -- | -- | -- |
| 112.61 | 0.496 | 2.91 | -- | 0.0486 | -- | -- | -- | 0.148 | 2.77 | -- | -- | -- | -- |
| 71.64 | 0.394 | 2.91 | -- | -- | 6.34 | -- | -- | 0.169 | -- | 994.8 | 10 | -- | -- |
| 112.75 | 0.496 | 2.91 | -- | -- | -- | -- | -- | 0.149 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 70.20 | atmosphere | 995.0 | 30 | > th | dose independent | sin | 5 | NA |
| 6 | 70.50 | atmosphere | 995.0 | 30 | < th | dose independent | sin | 5 | NA |
| 7 | 70.52 | atmosphere | 995.0 | 30 | < th | dose dependent | sin | 5 | NA |
| 9 | 70.55 | atmosphere | 995.0 | 90 | < th | dose dependent | sin | 7 | NA |
| 12 | 70.64 | atmosphere | 995.0 | 10 | < th | dose independent | rect. | 18 | 22 |
| 15 | 70.71 | atmosphere | 995.0 | 90 | < th | dose independent | sin | 7 | NA |
| 18 | 70.80 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 3 | 23 |
| 26 | 71.14 | atmosphere | 995.0 | 90 | < th | dose independent | rect. | 18 | 21 |
| 28 | 71.15 | atmosphere | 995.0 | 90 | < th | dose dependent | rect. | 18 | 21 |
| 30 | 71.17 | atmosphere | 995.0 | 10 | < th | dose dependent | rect. | 18 | 22 |
| 44 | 71.54 | atmosphere | 995.0 | 90 | < th | dose independent | rect. | 14 | 1 |
| 45 | 71.54 | atmosphere | 995.0 | 10 | < th | dose independent | rect. | 15 | 1 |
| 171 | 71.54 | atmosphere | 995.0 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 172 | 71.54 | atmosphere | 995.0 | 10 | < th | dose dependent | rect. | 15 | 1 |
| 380 | 74.82 | temperature | 30.0 | 10 | > th | dose dependent | rect. | 16 | 1 |
| 405 | 75.31 | temperature | 30.0 | 10 | > th | dose dependent | rect. | 15 | 4 |
| 422 | 75.75 | atmosphere | 995.0 | 10 | < th | dose dependent | no | NA | NA |
| 722 | 79.25 | temperature | 30.0 | 10 | > th | dose dependent | sin | 12 | NA |
| 757 | 82.51 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 759 | 82.61 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 763 | 82.67 | temperature | 20.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 785 | 82.69 | wind | 3.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 802 | 82.71 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 807 | 82.76 | wind | 3.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 810 | 82.86 | humidity | 80.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 815 | 82.90 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 817 | 82.90 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 818 | 82.90 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 822 | 82.90 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 824 | 82.90 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 829 | 82.90 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 830 | 82.90 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 831 | 82.90 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 833 | 82.90 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 838 | 82.90 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |