Os01g0287700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0287700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 75.81 | 0.409 | 8.57 | -1.28 | 0.235 | 0.595 | 1.12 | 0.99 | -0.0648 | 24 | 21.4 | 11 | -- | -- |
| 79.78 | 0.419 | 8.59 | -1.54 | 0.239 | 0.552 | 0.445 | -- | -0.117 | 22.7 | 21.4 | 11 | -- | -- |
| 79.09 | 0.417 | 8.58 | -1.44 | 0.244 | 0.556 | -- | 0.49 | -0.0897 | 22.2 | 21.4 | 11 | -- | -- |
| 80.55 | 0.418 | 8.59 | -1.56 | 0.24 | 0.542 | -- | -- | -0.119 | 22.2 | 21.5 | 11 | -- | -- |
| 82.45 | 0.425 | 8.57 | -1.42 | -- | 0.486 | -- | 0.46 | -0.0745 | -- | 21.4 | 11 | -- | -- |
| 94.87 | 0.457 | 8.56 | -1.4 | 0.165 | -- | -0.0478 | -- | 0.0156 | 18.7 | -- | -- | -- | -- |
| 94.87 | 0.456 | 8.56 | -1.4 | 0.165 | -- | -- | -- | 0.0153 | 18.9 | -- | -- | -- | -- |
| 83.68 | 0.426 | 8.58 | -1.52 | -- | 0.481 | -- | -- | -0.0979 | -- | 21.3 | 11 | -- | -- |
| 140.59 | 0.555 | 8.54 | -- | 0.195 | 0.334 | -- | -- | 0.104 | 20.5 | 21.1 | 4 | -- | -- |
| 96.3 | 0.459 | 8.56 | -1.4 | -- | -- | -- | -- | 0.0122 | -- | -- | -- | -- | -- |
| 146.21 | 0.566 | 8.53 | -- | 0.182 | -- | -- | -- | 0.171 | 18.5 | -- | -- | -- | -- |
| 142.62 | 0.556 | 8.54 | -- | -- | 0.308 | -- | -- | 0.107 | -- | 21.19 | 4 | -- | -- |
| 147.94 | 0.568 | 8.52 | -- | -- | -- | -- | -- | 0.167 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 71.62 | temperature | 25 | 90 | < th | dose dependent | rect. | 13 | 17 |
| 15 | 72.84 | temperature | 20 | 270 | > th | dose dependent | rect. | 18 | 8 |
| 91 | 74.70 | temperature | 30 | 270 | < th | dose dependent | rect. | 19 | 11 |
| 184 | 75.86 | temperature | 25 | 270 | < th | dose independent | rect. | 13 | 17 |
| 230 | 76.53 | temperature | 25 | 90 | < th | dose dependent | sin | 11 | NA |
| 305 | 77.12 | temperature | 25 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 317 | 77.19 | temperature | 25 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 323 | 77.22 | temperature | 25 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 325 | 77.23 | temperature | 25 | 30 | < th | dose dependent | no | NA | NA |
| 327 | 77.24 | temperature | 25 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 328 | 77.24 | temperature | 25 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 329 | 77.24 | temperature | 25 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 331 | 77.28 | temperature | 25 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 356 | 77.45 | temperature | 25 | 270 | < th | dose independent | rect. | 19 | 11 |
| 391 | 77.69 | temperature | 25 | 90 | < th | dose dependent | rect. | 23 | 7 |
| 393 | 77.70 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 4 |
| 423 | 77.91 | temperature | 10 | 90 | > th | dose dependent | sin | 10 | NA |
| 457 | 78.07 | temperature | 20 | 30 | > th | dose independent | rect. | 18 | 10 |
| 474 | 78.15 | temperature | 20 | 30 | > th | dose independent | rect. | 7 | 21 |
| 488 | 78.22 | temperature | 25 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 500 | 78.32 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 1 |
| 674 | 79.42 | temperature | 25 | 270 | < th | dose independent | sin | 12 | NA |
| 779 | 79.93 | temperature | 20 | 10 | > th | dose independent | rect. | 9 | 19 |
| 833 | 80.14 | temperature | 20 | 10 | < th | dose independent | rect. | 17 | 14 |
| 836 | 80.15 | temperature | 20 | 10 | > th | dose independent | rect. | 18 | 22 |
| 842 | 80.20 | temperature | 25 | 270 | > th | dose independent | sin | 12 | NA |
| 941 | 80.50 | temperature | 20 | 10 | > th | dose independent | sin | 10 | NA |