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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0286200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.05 (0.0208) R2 : 0.000159
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0118 (0.0438) R2dN8 : 0.000205 R2N8 : 0.000159
σ : 0.392
deviance : 70.52
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = precipitation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
65.92 0.381 3.07 -0.096 0.088 0.636 -0.169 -2.05 0.0375 5.9 0.01369 2997 -- --
68.55 0.386 3.04 -0.118 0.0832 0.393 -0.179 -- 0.0311 5.65 0.2315 3290 -- --
65.99 0.378 3.07 -0.0957 0.0875 0.632 -- -2.06 0.0379 6.07 0.2856 2998 -- --
68.59 0.386 3.04 -0.114 0.0886 0.379 -- -- 0.0317 7.17 0.3124 3261 -- --
66.39 0.379 3.07 -0.0946 -- 0.634 -- -2.04 0.0402 -- 0.3454 2996 -- --
69.92 0.392 3.05 -0.0457 0.0908 -- -0.198 -- 0.00451 7.31 -- -- -- --
70.02 0.392 3.05 -0.05 0.0905 -- -- -- 0.00488 7.3 -- -- -- --
68.99 0.387 3.04 -0.119 -- 0.382 -- -- 0.0319 -- 0.3424 3190 -- --
68.93 0.387 3.04 -- 0.0863 0.33 -- -- 0.0396 7.3 0.3229 3290 -- --
70.46 0.392 3.05 -0.0484 -- -- -- -- 0.00641 -- -- -- -- --
70.09 0.392 3.05 -- 0.09 -- -- -- 0.0105 7.33 -- -- -- --
69.32 0.388 3.04 -- -- 0.335 -- -- 0.0409 -- 0.3564 3290 -- --
70.52 0.392 3.05 -- -- -- -- -- 0.0118 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 62.80 radiation 1.0 43200 < th dose dependent rect. 3 1
2 63.09 atmosphere 995.0 30 > th dose independent rect. 3 23
3 63.09 temperature 25.0 90 > th dose dependent rect. 2 1
5 63.10 atmosphere 1005.0 30 > th dose dependent rect. 2 1
6 63.11 wind 3.0 30 < th dose independent rect. 2 1
7 63.11 temperature 20.0 30 > th dose independent rect. 2 1
13 63.12 wind 3.0 30 < th dose dependent rect. 2 1
21 63.13 temperature 10.0 30 > th dose independent rect. 2 1
23 63.13 temperature 30.0 30 < th dose independent rect. 2 1
24 63.13 humidity 50.0 30 > th dose independent rect. 2 1
27 63.13 atmosphere 995.0 30 > th dose independent rect. 2 1
28 63.13 atmosphere 1005.0 30 > th dose independent rect. 2 1
29 63.13 atmosphere 1010.0 30 < th dose independent rect. 2 1
31 63.13 radiation 1.0 30 < th dose independent rect. 2 1
36 63.13 precipitation 0.1 30 < th dose independent rect. 2 1
38 63.13 temperature 10.0 30 > th dose independent rect. 3 23
39 63.13 humidity 50.0 30 > th dose dependent rect. 2 1
43 63.13 radiation 1.0 30 < th dose dependent rect. 2 1
48 63.13 precipitation 0.1 30 < th dose dependent rect. 2 1
54 63.14 atmosphere 1015.0 30 < th dose dependent rect. 2 1
61 63.18 temperature 30.0 30 < th dose dependent rect. 2 1
63 63.19 wind 1.0 30 > th dose independent rect. 2 1
64 63.19 precipitation 0.1 30 < th dose independent rect. 3 23
66 63.19 precipitation 0.1 30 < th dose dependent rect. 3 23
76 63.23 wind 9.0 1440 < th dose independent rect. 3 1
78 63.23 temperature 10.0 1440 > th dose independent rect. 3 1
81 63.23 temperature 30.0 1440 < th dose independent rect. 3 1
85 63.23 humidity 50.0 1440 > th dose independent rect. 3 1
94 63.23 atmosphere 995.0 1440 > th dose independent rect. 3 1
95 63.23 radiation 1.0 1440 < th dose independent rect. 3 1
115 63.23 temperature 10.0 1440 > th dose independent rect. 4 23
160 63.30 wind 9.0 30 < th dose independent rect. 3 23
199 64.76 humidity 50.0 30 > th dose independent rect. 3 23
204 64.88 temperature 30.0 30 < th dose independent rect. 3 23
246 65.47 temperature 10.0 30 > th dose dependent rect. 3 23
251 65.55 temperature 20.0 270 < th dose independent rect. 9 1
258 65.81 humidity 90.0 90 < th dose independent rect. 2 1
262 65.92 wind 1.0 30 < th dose independent rect. 24 3
271 66.07 atmosphere 1015.0 30 < th dose independent rect. 3 23
281 66.22 radiation 1.0 720 < th dose independent rect. 18 9
290 66.36 wind 1.0 10 < th dose independent rect. 14 13
295 66.40 wind 1.0 10 < th dose independent rect. 17 10
297 66.40 radiation 1.0 720 < th dose dependent rect. 18 9
298 66.41 precipitation 0.1 4320 < th dose independent rect. 7 5
299 66.41 precipitation 0.1 4320 < th dose dependent rect. 7 5
300 66.42 precipitation 0.1 4320 > th dose independent rect. 21 1
301 66.42 wind 1.0 10 < th dose independent rect. 21 6
308 66.44 temperature 25.0 10 < th dose independent rect. 2 11
310 66.46 temperature 25.0 270 > th dose independent rect. 23 4
312 66.47 atmosphere 1015.0 720 < th dose independent rect. 3 6
317 66.49 precipitation 0.1 4320 > th dose dependent rect. 21 1
320 66.51 precipitation 0.1 4320 < th dose independent rect. 9 3
323 66.51 precipitation 0.1 4320 < th dose dependent rect. 9 3
328 66.52 precipitation 0.1 4320 > th dose independent rect. 7 5
331 66.52 precipitation 0.1 4320 > th dose dependent rect. 7 5
332 66.53 precipitation 0.1 4320 < th dose independent rect. 21 1
335 66.53 wind 1.0 10 > th dose independent rect. 21 23
336 66.53 precipitation 0.1 4320 < th dose dependent rect. 21 1
340 66.55 precipitation 0.1 720 < th dose independent rect. 3 6
343 66.55 precipitation 0.1 720 < th dose dependent rect. 3 6
354 66.58 precipitation 0.1 720 < th dose independent rect. 21 18
358 66.58 precipitation 0.1 720 < th dose dependent rect. 21 18
371 66.60 precipitation 0.1 4320 > th dose independent rect. 9 3
375 66.60 precipitation 0.1 4320 > th dose dependent rect. 9 3
379 66.61 atmosphere 995.0 720 > th dose independent rect. 21 18
388 66.64 precipitation 0.1 720 < th dose independent rect. 15 6
391 66.64 precipitation 0.1 720 < th dose dependent rect. 15 6
395 66.65 temperature 30.0 720 < th dose independent rect. 18 9
398 66.66 humidity 90.0 720 < th dose independent rect. 2 3
407 66.67 wind 9.0 720 < th dose independent rect. 3 6
408 66.67 temperature 10.0 720 > th dose independent rect. 3 6
409 66.67 temperature 10.0 720 > th dose independent rect. 15 6
410 66.67 humidity 50.0 720 > th dose independent rect. 3 6
411 66.67 atmosphere 995.0 720 > th dose independent rect. 3 6
413 66.67 temperature 10.0 720 > th dose independent rect. 9 18
414 66.67 temperature 10.0 720 > th dose independent rect. 21 18
420 66.69 precipitation 0.1 4320 > th dose independent rect. 16 1
442 66.71 precipitation 0.1 4320 > th dose dependent rect. 16 1
450 66.71 temperature 10.0 720 > th dose dependent rect. 3 6
454 66.72 temperature 25.0 10 > th dose independent rect. 22 22
471 66.75 precipitation 0.1 4320 < th dose independent rect. 16 1
472 66.75 wind 9.0 720 < th dose independent rect. 15 6
473 66.75 precipitation 0.1 4320 < th dose dependent rect. 16 1
477 66.76 temperature 15.0 90 > th dose dependent rect. 3 16
519 66.80 precipitation 0.1 720 < th dose independent rect. 9 18
522 66.80 precipitation 0.1 720 < th dose dependent rect. 9 18
526 66.82 wind 1.0 720 > th dose independent rect. 15 6
529 66.82 temperature 25.0 270 > th dose dependent rect. 23 4
544 66.85 atmosphere 995.0 720 > th dose independent rect. 15 6
556 66.86 temperature 30.0 720 < th dose independent rect. 15 6
561 66.86 temperature 15.0 90 > th dose dependent rect. 3 8
563 66.87 temperature 30.0 720 < th dose independent rect. 3 6
566 66.88 atmosphere 995.0 720 > th dose independent rect. 9 18
595 66.93 radiation 40.0 90 < th dose independent rect. 1 12
597 66.93 wind 1.0 4320 < th dose dependent rect. 19 1
598 66.93 radiation 10.0 90 < th dose dependent rect. 10 1
599 66.94 atmosphere 1015.0 1440 < th dose independent rect. 3 1
603 66.94 wind 1.0 10 < th dose independent rect. 8 19
610 66.95 precipitation 0.1 720 < th dose independent rect. 6 9
616 66.95 precipitation 0.1 720 < th dose dependent rect. 6 9
618 66.96 humidity 50.0 720 > th dose independent rect. 21 18
624 66.97 atmosphere 1015.0 720 < th dose independent rect. 15 6
638 66.99 atmosphere 1015.0 720 < th dose independent rect. 3 15
643 67.00 temperature 20.0 1440 > th dose independent rect. 9 1
650 67.00 temperature 15.0 10 > th dose dependent rect. 4 16
662 67.03 precipitation 0.1 4320 < th dose independent rect. 6 13
668 67.03 precipitation 0.1 4320 < th dose dependent rect. 6 13
671 67.04 precipitation 0.1 4320 < th dose independent rect. 15 4
672 67.04 temperature 20.0 270 > th dose independent rect. 3 14
673 67.04 precipitation 0.1 4320 > th dose independent rect. 5 14
674 67.04 precipitation 0.1 4320 < th dose dependent rect. 15 4
695 67.06 atmosphere 995.0 720 > th dose independent rect. 6 9
697 67.06 temperature 25.0 10 < th dose independent rect. 24 13
698 67.06 precipitation 0.1 720 < th dose independent rect. 3 15
704 67.06 precipitation 0.1 720 < th dose dependent rect. 3 15
711 67.07 wind 9.0 720 < th dose independent rect. 21 18
736 67.09 precipitation 0.1 4320 > th dose dependent rect. 6 13
741 67.10 wind 9.0 720 < th dose independent rect. 18 9
760 67.11 temperature 20.0 720 > th dose independent rect. 3 6
761 67.11 temperature 10.0 720 > th dose independent rect. 6 9
762 67.11 atmosphere 1015.0 720 < th dose independent rect. 6 9
764 67.11 temperature 10.0 720 > th dose independent rect. 15 15
773 67.12 precipitation 0.1 720 < th dose independent rect. 18 9
786 67.12 precipitation 0.1 720 < th dose dependent rect. 18 9
792 67.13 atmosphere 995.0 14400 > th dose independent rect. 4 4
802 67.13 precipitation 0.1 4320 > th dose dependent rect. 15 4
809 67.13 radiation 40.0 270 < th dose dependent rect. 9 18
811 67.14 atmosphere 995.0 720 > th dose independent rect. 13 2
838 67.16 atmosphere 995.0 14400 > th dose independent rect. 4 2
841 67.16 temperature 10.0 720 > th dose independent rect. 18 9
842 67.16 humidity 50.0 720 > th dose independent rect. 18 9
851 67.16 temperature 10.0 720 > th dose independent rect. 3 15
866 67.17 precipitation 0.1 4320 > th dose independent sin 1 NA
868 67.17 precipitation 0.1 4320 < th dose independent sin 1 NA
870 67.17 precipitation 0.1 720 < th dose independent rect. 13 2
878 67.17 precipitation 0.1 4320 < th dose dependent sin 1 NA
880 67.17 precipitation 0.1 720 < th dose dependent rect. 13 2
888 67.18 wind 7.0 720 < th dose independent rect. 1 2
889 67.18 atmosphere 995.0 14400 > th dose independent rect. 4 6
894 67.18 precipitation 0.1 720 < th dose independent rect. 3 22
899 67.18 temperature 10.0 270 > th dose dependent rect. 3 13
904 67.18 precipitation 0.1 720 < th dose dependent rect. 3 22
905 67.19 temperature 10.0 720 > th dose independent rect. 13 2
906 67.19 atmosphere 1015.0 720 < th dose independent rect. 13 2
910 67.19 atmosphere 995.0 720 > th dose independent rect. 18 9
913 67.19 temperature 10.0 720 > th dose independent rect. 15 22
923 67.20 temperature 10.0 720 > th dose independent rect. 1 2
924 67.20 temperature 30.0 720 < th dose independent rect. 1 2
925 67.20 humidity 50.0 720 > th dose independent rect. 1 2
928 67.20 atmosphere 995.0 720 > th dose independent rect. 1 2
930 67.20 radiation 1.0 720 < th dose independent rect. 1 2
944 67.20 atmosphere 995.0 720 > th dose independent rect. 3 22
945 67.20 precipitation 0.1 4320 > th dose dependent sin 1 NA
948 67.20 radiation 1.0 720 < th dose dependent rect. 1 2
969 67.21 radiation 40.0 90 < th dose independent rect. 11 16
994 67.23 wind 1.0 720 > th dose independent rect. 13 2