Os01g0284200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os01g0284200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 65.06 | 0.379 | 8.25 | -0.933 | 0.206 | -1.78 | -0.715 | 1.88 | -0.0791 | 17.2 | 24.95 | 1525 | -- | -- |
| 68.04 | 0.384 | 8.2 | -0.617 | 0.188 | -2.02 | -0.67 | -- | 0.011 | 17.2 | 23.97 | 1622 | -- | -- |
| 66.02 | 0.378 | 8.25 | -0.968 | 0.183 | -1.72 | -- | 2.01 | -0.0844 | 18.1 | 24.9 | 1620 | -- | -- |
| 68.93 | 0.387 | 8.21 | -0.617 | 0.191 | -2.01 | -- | -- | -0.00267 | 18 | 24.01 | 1632 | -- | -- |
| 67.42 | 0.382 | 8.25 | -0.965 | -- | -1.71 | -- | 1.8 | -0.0915 | -- | 24.9 | 1788 | -- | -- |
| 118.89 | 0.511 | 8.11 | -0.00591 | 0.167 | -- | -0.565 | -- | 0.397 | 17.1 | -- | -- | -- | -- |
| 119.53 | 0.512 | 8.12 | -0.00761 | 0.174 | -- | -- | -- | 0.394 | 18.2 | -- | -- | -- | -- |
| 70.55 | 0.391 | 8.2 | -0.641 | -- | -1.95 | -- | -- | -0.00546 | -- | 23.89 | 1793 | -- | -- |
| 76.76 | 0.41 | 8.17 | -- | 0.301 | -1.65 | -- | -- | 0.163 | 22.6 | 24.17 | 1572 | -- | -- |
| 121.1 | 0.514 | 8.11 | -0.0123 | -- | -- | -- | -- | 0.39 | -- | -- | -- | -- | -- |
| 119.53 | 0.511 | 8.12 | -- | 0.174 | -- | -- | -- | 0.394 | 18.2 | -- | -- | -- | -- |
| 79.27 | 0.415 | 8.18 | -- | -- | -1.64 | -- | -- | 0.117 | -- | 24.21 | 1663 | -- | -- |
| 121.1 | 0.514 | 8.11 | -- | -- | -- | -- | -- | 0.391 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 64.71 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 20 |
| 12 | 64.99 | temperature | 25 | 1440 | < th | dose dependent | rect. | 8 | 18 |
| 17 | 65.03 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 7 |
| 21 | 65.06 | temperature | 25 | 1440 | < th | dose dependent | rect. | 9 | 20 |
| 50 | 65.17 | temperature | 25 | 1440 | < th | dose dependent | sin | 17 | NA |
| 66 | 65.24 | temperature | 25 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 67 | 65.25 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 70 | 65.26 | temperature | 25 | 1440 | < th | dose dependent | rect. | 13 | 23 |
| 96 | 65.38 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 23 |
| 271 | 66.52 | temperature | 25 | 1440 | < th | dose dependent | sin | 2 | NA |
| 294 | 66.69 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 305 | 66.74 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 338 | 66.88 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 339 | 66.89 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 429 | 67.07 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 508 | 67.27 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 572 | 67.45 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 588 | 67.52 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 7 |
| 592 | 67.52 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 604 | 67.55 | temperature | 10 | 1440 | > th | dose dependent | rect. | 15 | 21 |
| 669 | 67.71 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 10 |
| 732 | 67.82 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 748 | 67.86 | temperature | 10 | 1440 | > th | dose dependent | rect. | 4 | 22 |
| 782 | 67.92 | temperature | 10 | 1440 | > th | dose dependent | rect. | 8 | 22 |
| 783 | 67.92 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 23 |
| 801 | 67.95 | temperature | 10 | 1440 | > th | dose dependent | rect. | 15 | 15 |
| 812 | 67.97 | temperature | 10 | 1440 | > th | dose dependent | no | NA | NA |
| 823 | 67.98 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 824 | 67.99 | temperature | 10 | 1440 | > th | dose dependent | sin | 14 | NA |
| 893 | 68.06 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 939 | 68.11 | humidity | 70 | 43200 | < th | dose dependent | rect. | 5 | 5 |