Os01g0283600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Cinnamoyl-CoA reductase (EC 1.2.1.44).
FiT-DB / Search/ Help/ Sample detail
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Os01g0283600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Cinnamoyl-CoA reductase (EC 1.2.1.44).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 328 | 0.851 | 3.5 | -1.52 | 0.838 | 1.68 | -1.1 | -6.68 | -0.109 | 8.69 | 1.055 | 476 | 4.02 | 0.966 |
| 350.19 | 0.872 | 3.46 | -1.18 | 0.882 | 1.52 | -1.19 | -- | -0.129 | 8.7 | 0.5 | 557 | 4.13 | 0.709 |
| 331.45 | 0.848 | 3.51 | -1.56 | 0.854 | 1.65 | -- | -7.26 | -0.106 | 8.6 | 1.043 | 512 | 4.02 | 0.988 |
| 360.26 | 0.884 | 3.44 | -1.17 | 0.899 | 1.08 | -- | -- | -0.147 | 8.87 | 0.5075 | 552 | 4.13 | 0.632 |
| 357.38 | 0.88 | 3.51 | -1.57 | -- | 2.18 | -- | -7.14 | 0.00489 | -- | 1.141 | 479 | 3.92 | 0.683 |
| 371.38 | 0.903 | 3.46 | -1.08 | 1.11 | -- | -1.68 | -- | -0.259 | 8.61 | -- | -- | -- | -- |
| 380.52 | 0.913 | 3.46 | -1.14 | 1.11 | -- | -- | -- | -0.26 | 8.51 | -- | -- | -- | -- |
| 374.58 | 0.901 | 3.45 | -1.28 | -- | 1.26 | -- | -- | -0.0636 | -- | 1.602 | 514 | 3.92 | 0.767 |
| 399.14 | 0.93 | 3.43 | -- | 0.958 | 0.994 | -- | -- | -0.0505 | 8.62 | 0.5905 | 513 | 3.97 | 0.65 |
| 449.92 | 0.991 | 3.49 | -1.13 | -- | -- | -- | -- | -0.25 | -- | -- | -- | -- | -- |
| 414.63 | 0.953 | 3.44 | -- | 1.11 | -- | -- | -- | -0.134 | 8.59 | -- | -- | -- | -- |
| 418.13 | 0.952 | 3.42 | -- | -- | 1.15 | -- | -- | 0.0553 | -- | 1.623 | 507 | 3.93 | 0.775 |
| 483.78 | 1.03 | 3.46 | -- | -- | -- | -- | -- | -0.124 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 334.50 | wind | 1.0 | 720 | < th | dose independent | rect. | 4 | 1 |
| 2 | 337.44 | wind | 1.0 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 3 | 337.98 | wind | 1.0 | 43200 | < th | dose independent | rect. | 2 | 1 |
| 4 | 338.29 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 1 |
| 5 | 339.47 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 18 | 16 |
| 6 | 339.97 | wind | 1.0 | 720 | < th | dose dependent | rect. | 4 | 1 |
| 7 | 340.01 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 18 | 12 |
| 8 | 340.21 | temperature | 20.0 | 270 | > th | dose independent | rect. | 5 | 4 |
| 10 | 340.65 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 18 | 11 |
| 13 | 341.82 | radiation | 40.0 | 14400 | < th | dose independent | rect. | 15 | 4 |
| 14 | 341.93 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 21 | 7 |
| 18 | 342.08 | radiation | 40.0 | 14400 | < th | dose independent | rect. | 15 | 8 |
| 19 | 342.09 | temperature | 15.0 | 43200 | > th | dose dependent | rect. | 6 | 2 |
| 25 | 342.12 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 36 | 342.15 | radiation | 40.0 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 46 | 342.24 | atmosphere | 1000.0 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 53 | 342.27 | radiation | 40.0 | 14400 | < th | dose independent | rect. | 15 | 12 |
| 55 | 342.30 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 18 | 12 |
| 57 | 342.31 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 19 | 10 |
| 118 | 342.46 | temperature | 30.0 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 120 | 342.46 | temperature | 30.0 | 43200 | < th | dose dependent | rect. | 6 | 3 |
| 144 | 342.49 | temperature | 15.0 | 43200 | > th | dose dependent | sin | 7 | NA |
| 188 | 342.54 | atmosphere | 1015.0 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 193 | 342.55 | wind | 3.0 | 43200 | > th | dose independent | rect. | 12 | 2 |
| 226 | 342.59 | temperature | 15.0 | 43200 | > th | dose dependent | rect. | 24 | 1 |
| 321 | 342.67 | temperature | 15.0 | 43200 | > th | dose dependent | rect. | 20 | 8 |
| 330 | 342.68 | temperature | 15.0 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 331 | 342.68 | temperature | 15.0 | 43200 | > th | dose dependent | rect. | 21 | 6 |
| 407 | 342.72 | temperature | 30.0 | 43200 | < th | dose dependent | rect. | 24 | 1 |
| 443 | 342.74 | radiation | 40.0 | 14400 | < th | dose independent | rect. | 15 | 16 |
| 508 | 342.77 | temperature | 20.0 | 270 | > th | dose independent | rect. | 1 | 9 |
| 527 | 342.78 | temperature | 15.0 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 551 | 342.79 | temperature | 15.0 | 43200 | > th | dose dependent | no | NA | NA |
| 569 | 342.79 | temperature | 15.0 | 43200 | > th | dose dependent | rect. | 5 | 23 |
| 720 | 342.86 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 722 | 342.86 | atmosphere | 1005.0 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 750 | 342.87 | atmosphere | 1010.0 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 751 | 342.87 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 753 | 342.87 | temperature | 30.0 | 43200 | < th | dose dependent | sin | 8 | NA |
| 786 | 342.88 | temperature | 30.0 | 43200 | < th | dose dependent | rect. | 21 | 6 |
| 804 | 342.89 | wind | 5.0 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 808 | 342.89 | temperature | 30.0 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 931 | 342.94 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 949 | 342.95 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 958 | 342.95 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 23 | 1 |