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Os01g0279800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to LRR protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.1 (0.0148) R2 : 0.416
β1 : 0.965 (0.0541) R2dD : 0.424 R2D : 0.359
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.181 (0.0315) R2dN8 : 0.0567 R2N8 : -0.008
σ : 0.277
deviance : 35.15
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
13.84 0.175 11.2 0.725 0.35 0.947 -0.289 -0.47 0.0443 19.4 10.12 33 -- --
14.02 0.174 11.2 0.791 0.342 0.925 -0.287 -- 0.0648 19.3 7.418 46 -- --
14.07 0.175 11.2 0.737 0.35 0.93 -- -0.453 0.047 19.3 10.74 33 -- --
14.24 0.176 11.2 0.799 0.342 0.919 -- -- 0.0653 19.3 7.411 44 -- --
17.81 0.197 11.2 0.631 -- 1.08 -- -0.76 0.00566 -- 11.42 266 -- --
22.32 0.221 11.2 0.982 0.496 -- -0.072 -- 0.194 17.4 -- -- -- --
22.34 0.221 11.2 0.982 0.496 -- -- -- 0.193 17.4 -- -- -- --
18.21 0.199 11.2 0.748 -- 1.07 -- -- 0.038 -- 4.725 252 -- --
29.32 0.252 11.2 -- 0.298 1.3 -- -- -0.0699 20.7 7.041 66 -- --
35.15 0.277 11.1 0.965 -- -- -- -- 0.181 -- -- -- -- --
47.74 0.323 11.2 -- 0.48 -- -- -- 0.084 17.5 -- -- -- --
31.97 0.263 11.2 -- -- 1.32 -- -- -0.0733 -- 0.8189 260 -- --
59.71 0.361 11.2 -- -- -- -- -- 0.0741 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 12.82 temperature 10 270 > th dose dependent rect. 4 22
5 13.25 temperature 30 90 < th dose dependent rect. 9 23
10 13.45 temperature 30 90 < th dose dependent rect. 23 23
20 13.62 temperature 20 30 > th dose dependent rect. 7 19
22 13.65 temperature 20 10 > th dose dependent rect. 6 23
31 13.73 temperature 20 10 > th dose dependent rect. 7 21
43 13.84 temperature 10 30 > th dose dependent no NA NA
46 13.84 temperature 30 30 < th dose dependent rect. 11 21
48 13.85 temperature 30 90 < th dose dependent no NA NA
59 13.89 temperature 30 30 < th dose dependent rect. 17 23
74 13.95 temperature 30 30 < th dose dependent rect. 13 23
79 13.98 temperature 30 30 < th dose dependent rect. 15 23
106 14.12 temperature 10 720 > th dose dependent rect. 21 20
109 14.14 temperature 30 30 < th dose dependent rect. 19 23
116 14.17 temperature 30 10 < th dose dependent rect. 1 23
165 14.35 temperature 20 30 > th dose dependent rect. 21 23
177 14.39 temperature 15 270 > th dose dependent rect. 16 23
197 14.47 temperature 10 720 > th dose dependent rect. 12 22
254 14.62 temperature 20 10 > th dose dependent rect. 23 23
259 14.63 temperature 20 90 > th dose dependent rect. 19 23
270 14.65 temperature 30 30 < th dose dependent rect. 3 23
334 14.79 temperature 25 1440 < th dose dependent rect. 21 1
349 14.81 temperature 25 1440 < th dose dependent rect. 17 9
470 14.93 temperature 25 1440 < th dose dependent sin 14 NA
663 15.08 temperature 20 1440 < th dose independent rect. 4 1
699 15.10 temperature 20 1440 > th dose independent rect. 4 1
816 15.16 temperature 20 10 > th dose dependent rect. 15 23
858 15.19 temperature 20 4320 < th dose independent rect. 21 1
874 15.20 temperature 25 1440 < th dose dependent rect. 4 1
902 15.21 temperature 25 1440 < th dose dependent rect. 4 23
945 15.24 temperature 25 1440 < th dose dependent rect. 1 4
992 15.27 temperature 20 4320 < th dose independent rect. 19 4