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Os01g0279100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Basic leucine zipper transcription factor CAT103 (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 14.7 (0.0246) R2 : 0.76
β1 : -0.822 (0.0898) R2dD : 0.0457 R2D : 0.0133
β2 : 2.2 (0.062) R2dC : 0.665 R2C : 0.63
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.65 (0.0523) R2dN8 : 0.109 R2N8 : 0.0502
σ : 0.461
deviance : 96.97
__
_____
C
peak time of C : 8.27
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
61.34 0.368 14.6 -0.62 3.62 2.45 -2.78 -1.91 -0.55 11.4 0.1336 254 6.29 --
74.32 0.402 14.6 -0.587 3.6 2.36 -2.22 -- -0.592 11.4 0.007595 234 6.51 --
69.33 0.388 14.6 -0.691 3.54 2.39 -- 0.417 -0.553 11.4 0.05969 252 6.26 --
69.89 0.389 14.6 -0.706 3.52 2.34 -- -- -0.541 11.4 6.402e-05 242 5.97 --
95.91 0.456 14.7 -0.974 -- 2.63 -- 0.768 -0.579 -- 0.06434 986 6.03 --
90.37 0.446 14.7 -0.779 2.2 -- -1.46 -- -0.651 8.27 -- -- -- --
96.97 0.461 14.7 -0.822 2.2 -- -- -- -0.65 8.27 -- -- -- --
86.09 0.432 14.7 -0.666 -- 2.72 -- -- -0.524 -- 0.05 1014 6.13 --
84.68 0.429 14.6 -- 3.5 2.36 -- -- -0.532 11.4 0.009991 254 6.06 --
364.25 0.892 14.7 -0.807 -- -- -- -- -0.626 -- -- -- -- --
114.79 0.501 14.6 -- 2.19 -- -- -- -0.558 8.3 -- -- -- --
96.85 0.458 14.7 -- -- 2.84 -- -- -0.491 -- 0.009999 1024 6.58 --
381.44 0.912 14.7 -- -- -- -- -- -0.536 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 56.89 temperature 10.0 270 > th dose dependent rect. 8 6
3 58.33 temperature 10.0 10 > th dose dependent rect. 10 6
5 58.63 temperature 10.0 270 > th dose dependent rect. 20 18
6 58.74 humidity 50.0 270 > th dose independent rect. 14 19
9 58.86 temperature 10.0 270 > th dose dependent rect. 10 3
10 59.12 wind 7.0 270 < th dose independent rect. 19 9
11 59.19 humidity 50.0 270 > th dose independent rect. 9 5
17 59.69 radiation 1.0 270 > th dose independent rect. 9 5
18 59.85 humidity 50.0 270 > th dose independent rect. 15 17
19 59.86 wind 9.0 270 < th dose independent rect. 9 5
20 59.87 temperature 10.0 270 > th dose dependent rect. 18 21
28 60.08 precipitation 0.1 270 < th dose independent rect. 9 5
29 60.08 precipitation 0.1 270 < th dose dependent rect. 9 5
30 60.17 temperature 10.0 270 > th dose independent rect. 9 5
31 60.17 atmosphere 995.0 270 > th dose independent rect. 9 5
32 60.17 atmosphere 1015.0 270 < th dose independent rect. 9 5
33 60.17 temperature 10.0 270 > th dose independent rect. 14 19
34 60.22 atmosphere 995.0 270 > th dose independent rect. 14 19
35 60.25 radiation 1.0 270 > th dose independent rect. 8 7
38 60.29 humidity 50.0 270 > th dose independent rect. 10 3
39 60.38 humidity 50.0 270 > th dose independent rect. 8 7
40 60.39 humidity 60.0 270 > th dose independent rect. 19 9
41 60.51 temperature 10.0 270 > th dose independent rect. 19 9
42 60.51 temperature 30.0 270 < th dose independent rect. 19 9
44 60.51 atmosphere 995.0 270 > th dose independent rect. 19 9
45 60.51 radiation 1.0 270 < th dose independent rect. 19 9
50 60.51 temperature 10.0 270 > th dose independent rect. 4 15
51 60.51 atmosphere 1015.0 270 < th dose independent rect. 4 15
52 60.51 radiation 1.0 270 < th dose dependent rect. 19 9
57 60.55 radiation 40.0 270 < th dose independent rect. 14 18
58 60.68 wind 9.0 270 < th dose independent rect. 8 7
59 60.70 humidity 50.0 10 > th dose independent rect. 10 6
60 60.76 wind 1.0 270 > th dose independent rect. 9 5
61 60.81 precipitation 0.1 270 < th dose independent rect. 19 9
62 60.81 precipitation 0.1 270 < th dose dependent rect. 19 9
65 60.90 precipitation 0.1 270 < th dose independent rect. 8 7
66 60.90 precipitation 0.1 270 < th dose dependent rect. 8 7
67 60.92 atmosphere 995.0 270 > th dose independent rect. 15 17
69 61.00 temperature 10.0 270 > th dose independent rect. 8 7
70 61.00 atmosphere 1015.0 270 < th dose independent rect. 8 7
71 61.00 temperature 10.0 270 > th dose independent rect. 15 17
78 61.32 humidity 50.0 10 > th dose independent rect. 16 18
81 61.38 radiation 1.0 270 > th dose independent rect. 10 3
84 61.44 precipitation 0.1 270 < th dose independent rect. 14 19
85 61.44 precipitation 0.1 270 < th dose dependent rect. 14 19
86 61.48 wind 9.0 270 < th dose independent rect. 10 3
91 61.58 atmosphere 995.0 270 > th dose independent rect. 8 7
94 61.59 wind 9.0 270 < th dose independent rect. 14 19
97 61.63 atmosphere 995.0 270 > th dose independent rect. 4 15
98 61.68 precipitation 0.1 270 < th dose independent rect. 10 3
99 61.68 precipitation 0.1 270 < th dose dependent rect. 10 3
100 61.70 wind 1.0 270 > th dose independent rect. 8 7
102 61.71 atmosphere 995.0 10 > th dose independent rect. 16 18
103 61.72 temperature 10.0 270 > th dose independent rect. 10 3
104 61.72 atmosphere 995.0 270 > th dose independent rect. 10 3
105 61.72 atmosphere 1015.0 270 < th dose independent rect. 10 3
106 61.72 wind 9.0 10 < th dose independent rect. 10 6
107 61.72 temperature 10.0 270 > th dose independent rect. 13 21
109 61.74 precipitation 0.1 270 < th dose independent rect. 4 15
110 61.74 precipitation 0.1 270 < th dose dependent rect. 4 15
124 61.94 temperature 10.0 10 > th dose independent rect. 10 6
126 61.94 atmosphere 1015.0 10 < th dose independent rect. 10 6
127 61.94 precipitation 0.1 10 < th dose independent rect. 10 6
128 61.94 temperature 10.0 10 > th dose independent rect. 16 18
129 61.94 precipitation 0.1 10 < th dose dependent rect. 10 6
141 62.00 radiation 1.0 10 > th dose independent rect. 10 6
161 62.12 precipitation 0.1 270 < th dose independent rect. 15 17
162 62.12 precipitation 0.1 270 < th dose dependent rect. 15 17
170 62.20 wind 1.0 270 > th dose independent rect. 10 3
178 62.28 wind 1.0 10 > th dose independent rect. 10 6
190 62.39 wind 9.0 270 < th dose independent rect. 15 17
191 62.40 atmosphere 995.0 270 > th dose independent rect. 13 21
198 62.49 temperature 10.0 10 > th dose dependent rect. 21 19
200 62.53 temperature 10.0 1440 > th dose independent rect. 11 6
204 62.53 temperature 10.0 1440 > th dose independent rect. 17 18
218 62.70 precipitation 0.1 10 < th dose independent rect. 16 18
219 62.70 precipitation 0.1 10 < th dose dependent rect. 16 18
220 62.72 humidity 90.0 270 < th dose independent rect. 10 3
223 62.75 wind 7.0 270 < th dose independent rect. 9 18
234 62.95 wind 9.0 10 < th dose independent rect. 16 18
235 62.98 temperature 30.0 10 < th dose independent rect. 16 18
239 63.04 atmosphere 995.0 10 > th dose independent rect. 10 6
240 63.05 humidity 90.0 270 < th dose independent rect. 9 5
246 63.16 wind 9.0 270 < th dose independent rect. 4 15
273 63.41 radiation 20.0 270 < th dose independent rect. 16 1
297 63.58 precipitation 0.1 270 < th dose independent rect. 13 21
298 63.58 precipitation 0.1 270 < th dose dependent rect. 13 21
301 63.67 wind 9.0 270 < th dose dependent rect. 10 3
304 63.73 wind 9.0 270 < th dose independent rect. 13 21
317 63.90 atmosphere 995.0 10 > th dose dependent rect. 16 18
323 63.97 humidity 50.0 270 > th dose independent rect. 15 3
324 63.99 wind 9.0 270 < th dose dependent rect. 9 5
329 64.02 humidity 50.0 270 > th dose independent rect. 14 6
341 64.15 radiation 1.0 270 < th dose dependent sin 12 NA
346 64.18 radiation 1.0 270 > th dose independent rect. 15 17
361 64.32 wind 7.0 90 < th dose independent rect. 21 8
385 64.47 radiation 20.0 10 < th dose dependent sin 19 NA
395 64.53 humidity 90.0 10 < th dose independent rect. 10 6
402 64.63 radiation 30.0 270 < th dose independent rect. 15 3
405 64.63 radiation 40.0 270 < th dose dependent rect. 15 3
406 64.63 humidity 50.0 270 > th dose dependent rect. 19 9
432 64.88 radiation 40.0 10 < th dose independent rect. 16 18
435 64.90 wind 7.0 270 < th dose independent rect. 8 20
452 65.02 temperature 10.0 90 > th dose independent rect. 21 8
453 65.02 temperature 30.0 90 < th dose independent rect. 21 8
454 65.02 humidity 50.0 90 > th dose independent rect. 21 8
457 65.02 atmosphere 995.0 90 > th dose independent rect. 21 8
459 65.02 radiation 20.0 90 < th dose independent rect. 21 8
465 65.04 radiation 40.0 90 < th dose dependent rect. 21 8
466 65.05 humidity 50.0 270 > th dose independent rect. 21 17
474 65.09 radiation 1.0 90 < th dose independent rect. 21 8
480 65.11 precipitation 0.1 90 < th dose independent rect. 21 8
481 65.11 precipitation 0.1 90 < th dose dependent rect. 21 8
489 65.17 wind 1.0 270 > th dose dependent rect. 14 7
492 65.18 radiation 1.0 270 > th dose independent rect. 16 15
495 65.20 atmosphere 995.0 270 > th dose dependent rect. 14 6
499 65.23 radiation 30.0 10 < th dose dependent rect. 6 15
513 65.35 wind 1.0 270 > th dose independent rect. 19 9
514 65.35 radiation 40.0 270 < th dose dependent rect. 16 1
518 65.37 atmosphere 1015.0 270 < th dose independent rect. 19 9
521 65.38 wind 9.0 270 < th dose independent rect. 21 17
534 65.46 radiation 1.0 90 < th dose dependent rect. 21 10
535 65.46 wind 9.0 270 < th dose dependent rect. 9 18
539 65.49 atmosphere 1015.0 10 < th dose dependent rect. 10 6
545 65.54 wind 1.0 270 > th dose independent rect. 14 7
563 65.59 radiation 40.0 270 < th dose independent rect. 14 6
570 65.59 radiation 1.0 90 < th dose dependent rect. 21 16
575 65.61 radiation 1.0 90 < th dose dependent rect. 21 13
594 65.68 temperature 10.0 90 > th dose dependent rect. 10 19
595 65.70 wind 1.0 270 > th dose dependent rect. 15 3
597 65.71 wind 1.0 270 > th dose independent rect. 14 18
602 65.73 temperature 10.0 270 > th dose independent rect. 14 7
603 65.73 temperature 10.0 270 > th dose independent rect. 21 17
604 65.73 atmosphere 995.0 270 > th dose independent rect. 21 17
614 65.79 precipitation 0.1 270 < th dose independent rect. 21 17
616 65.79 precipitation 0.1 270 < th dose dependent rect. 21 17
628 65.85 atmosphere 995.0 270 > th dose independent rect. 14 6
635 65.88 radiation 20.0 10 < th dose dependent rect. 21 9
638 65.89 wind 1.0 270 > th dose independent rect. 4 15
655 66.00 wind 9.0 270 < th dose dependent rect. 10 16
672 66.06 humidity 50.0 270 > th dose independent rect. 4 15
700 66.18 atmosphere 1015.0 270 < th dose independent rect. 14 6
738 66.24 radiation 40.0 270 < th dose dependent rect. 15 17
747 66.29 atmosphere 1015.0 270 < th dose independent rect. 21 17
756 66.35 wind 7.0 270 < th dose independent rect. 19 20
763 66.38 radiation 30.0 10 < th dose dependent rect. 16 5
765 66.40 precipitation 0.1 270 < th dose independent rect. 9 18
767 66.40 precipitation 0.1 270 < th dose dependent rect. 9 18
770 66.42 radiation 1.0 90 < th dose independent rect. 21 16
775 66.45 radiation 1.0 90 < th dose independent rect. 21 13
776 66.45 wind 9.0 270 < th dose independent rect. 17 23
778 66.45 atmosphere 995.0 270 > th dose dependent rect. 15 3
784 66.46 atmosphere 1015.0 270 < th dose dependent rect. 10 3
788 66.48 temperature 20.0 270 > th dose independent rect. 15 3
799 66.52 atmosphere 1015.0 10 < th dose independent rect. 16 18
801 66.52 temperature 10.0 90 > th dose dependent rect. 21 8
802 66.52 wind 9.0 90 < th dose dependent rect. 20 9
819 66.58 radiation 1.0 270 < th dose independent sin 12 NA
824 66.61 temperature 30.0 270 < th dose independent rect. 15 3
826 66.62 radiation 1.0 270 > th dose independent sin 12 NA
839 66.64 radiation 10.0 10 < th dose independent rect. 16 5
859 66.65 temperature 10.0 270 > th dose dependent rect. 19 9
875 66.74 radiation 40.0 90 < th dose dependent rect. 15 6
885 66.78 precipitation 0.1 270 < th dose independent rect. 14 7
888 66.78 precipitation 0.1 270 < th dose dependent rect. 14 7
891 66.79 atmosphere 1015.0 90 < th dose independent rect. 21 8
892 66.79 humidity 50.0 10 > th dose independent rect. 21 19
893 66.79 humidity 50.0 270 > th dose independent rect. 18 21
894 66.80 radiation 10.0 10 < th dose independent sin 18 NA
900 66.81 atmosphere 995.0 90 > th dose independent rect. 16 5
901 66.83 atmosphere 995.0 10 > th dose independent rect. 16 5
911 66.86 atmosphere 995.0 270 > th dose independent rect. 15 3
912 66.86 precipitation 0.1 270 < th dose independent rect. 3 6
915 66.86 precipitation 0.1 270 < th dose dependent rect. 3 6
927 66.90 wind 9.0 270 < th dose independent rect. 3 6
928 66.90 temperature 10.0 270 > th dose independent rect. 3 6
930 66.90 humidity 50.0 270 > th dose independent rect. 3 6
931 66.90 atmosphere 995.0 270 > th dose independent rect. 3 6
932 66.90 atmosphere 1015.0 270 < th dose independent rect. 3 6
934 66.90 wind 1.0 30 > th dose independent rect. 16 18
935 66.90 temperature 10.0 270 > th dose independent rect. 9 18
941 66.93 humidity 70.0 10 > th dose independent rect. 16 5
948 66.94 wind 9.0 10 < th dose independent rect. 21 19
956 66.97 temperature 30.0 90 < th dose independent rect. 16 5
963 66.99 wind 9.0 270 < th dose independent rect. 14 7
971 67.00 atmosphere 995.0 10 > th dose dependent rect. 16 5
972 67.01 temperature 10.0 90 > th dose independent rect. 16 5
975 67.01 atmosphere 1010.0 90 < th dose independent rect. 16 5
994 67.02 wind 7.0 10 < th dose independent rect. 21 9
996 67.02 precipitation 0.1 270 < th dose independent rect. 18 21
1000 67.02 precipitation 0.1 270 < th dose dependent rect. 18 21