FiT-DB / Search/ Help/ Sample detail

Os01g0277600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Phospholipid-transporting ATPase 1 (EC 3.6.3.1) (Aminophospholipid flippase 1).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.1 (0.0145) R2 : 0.0298
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.115 (0.0306) R2dN8 : 0.0385 R2N8 : 0.0298
σ : 0.274
deviance : 34.46
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
21.03 0.215 11.1 0.0223 0.124 -0.425 0.248 0.469 0.0954 5.32 20 117 -- --
21.39 0.215 11.1 0.0207 0.226 -0.523 0.578 -- 0.0989 3.33 16.96 146 -- --
21.02 0.214 11.1 0.0174 0.168 -0.448 -- 0.555 0.093 5.08 20 148 -- --
22.36 0.22 11.1 0.00955 0.17 -0.451 -- -- 0.096 4.83 18.95 144 -- --
21.87 0.218 11.1 0.0291 -- -0.396 -- 0.538 0.0965 -- 21.04 112 -- --
24.76 0.233 11.1 0.0519 0.377 -- -0.386 -- 0.124 11.9 -- -- -- --
25.39 0.236 11.1 0.036 0.379 -- -- -- 0.122 11.8 -- -- -- --
23.15 0.224 11.1 0.0204 -- -0.386 -- -- 0.0911 -- 20 101 -- --
22.36 0.22 11.1 -- 0.171 -0.452 -- -- 0.095 4.8 18.95 144 -- --
34.44 0.274 11.1 0.025 -- -- -- -- 0.117 -- -- -- -- --
25.42 0.236 11.1 -- 0.379 -- -- -- 0.118 11.8 -- -- -- --
23.15 0.224 11.1 -- -- -0.38 -- -- 0.096 -- 20 101 -- --
34.46 0.274 11.1 -- -- -- -- -- 0.115 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 21.01 radiation 20.0 90 < th dose dependent rect. 5 23
2 21.07 radiation 20.0 720 < th dose independent rect. 22 14
3 21.07 radiation 10.0 90 < th dose independent rect. 5 23
5 21.10 radiation 20.0 720 < th dose dependent rect. 22 14
7 21.11 radiation 20.0 720 < th dose independent rect. 19 17
11 21.22 radiation 20.0 720 < th dose independent sin 8 NA
16 21.24 precipitation 0.1 43200 > th dose dependent rect. 17 2
19 21.25 radiation 20.0 90 < th dose dependent rect. 17 22
21 21.26 radiation 10.0 720 < th dose independent rect. 22 12
23 21.26 radiation 20.0 720 < th dose dependent sin 7 NA
28 21.28 radiation 10.0 270 < th dose independent rect. 15 23
29 21.28 radiation 20.0 720 < th dose dependent rect. 19 17
30 21.29 radiation 10.0 720 < th dose independent rect. 1 9
33 21.29 radiation 20.0 90 < th dose independent rect. 17 22
46 21.32 radiation 20.0 90 < th dose dependent rect. 15 23
50 21.34 radiation 20.0 720 < th dose independent rect. 1 11
51 21.34 radiation 20.0 270 < th dose independent rect. 8 23
53 21.34 radiation 10.0 270 < th dose independent rect. 20 23
59 21.35 radiation 20.0 90 < th dose dependent no NA NA
61 21.36 radiation 10.0 270 < th dose independent no NA NA
84 21.38 radiation 20.0 720 < th dose dependent rect. 1 11
89 21.39 precipitation 0.1 43200 > th dose dependent rect. 20 1
103 21.42 precipitation 0.1 43200 < th dose independent rect. 17 2
105 21.42 precipitation 0.1 43200 < th dose dependent rect. 17 2
108 21.43 precipitation 0.1 43200 > th dose independent rect. 17 2
129 21.45 radiation 10.0 270 < th dose independent rect. 2 23
132 21.45 precipitation 0.1 43200 > th dose dependent rect. 17 5
137 21.46 radiation 10.0 270 < th dose independent rect. 12 23
146 21.46 radiation 20.0 270 < th dose dependent rect. 20 23
167 21.50 radiation 30.0 270 < th dose dependent rect. 8 23
169 21.51 atmosphere 1005.0 14400 > th dose independent rect. 9 2
170 21.51 atmosphere 1005.0 14400 < th dose independent rect. 9 3
185 21.52 temperature 20.0 1440 > th dose dependent rect. 19 1
196 21.53 radiation 1.0 720 > th dose dependent sin 9 NA
202 21.53 wind 9.0 14400 > th dose dependent rect. 18 17
211 21.54 temperature 20.0 4320 > th dose dependent rect. 17 3
236 21.56 radiation 10.0 720 < th dose independent rect. 6 4
239 21.56 wind 9.0 14400 > th dose independent rect. 18 11
241 21.56 wind 9.0 14400 > th dose independent rect. 18 16
249 21.56 temperature 30.0 1440 < th dose dependent rect. 18 3
251 21.56 radiation 20.0 90 < th dose dependent rect. 5 10
263 21.57 temperature 30.0 1440 < th dose dependent rect. 19 1
268 21.57 wind 9.0 14400 > th dose dependent rect. 18 12
276 21.58 wind 9.0 14400 < th dose independent rect. 18 16
296 21.59 radiation 10.0 270 < th dose independent rect. 5 9
315 21.60 wind 9.0 14400 < th dose independent rect. 18 11
404 21.65 radiation 10.0 720 < th dose independent rect. 6 6
408 21.65 radiation 10.0 90 > th dose independent rect. 15 23
477 21.68 radiation 1.0 720 > th dose dependent rect. 5 6
481 21.68 wind 7.0 14400 > th dose dependent rect. 20 9
491 21.69 temperature 20.0 14400 > th dose independent rect. 21 2
509 21.69 radiation 1.0 270 > th dose dependent rect. 12 23
528 21.71 temperature 20.0 1440 > th dose independent rect. 21 1
540 21.71 wind 7.0 14400 > th dose dependent rect. 20 14
564 21.73 precipitation 0.1 43200 > th dose independent rect. 20 1
565 21.73 temperature 20.0 14400 < th dose independent rect. 21 2
588 21.74 wind 9.0 14400 > th dose independent rect. 18 8
605 21.74 wind 9.0 43200 > th dose dependent rect. 14 17
610 21.75 wind 9.0 14400 > th dose independent rect. 18 6
616 21.75 wind 9.0 14400 < th dose independent rect. 20 14
628 21.75 wind 9.0 14400 > th dose dependent rect. 18 7
637 21.75 radiation 20.0 270 < th dose dependent rect. 2 23
639 21.76 radiation 10.0 270 < th dose independent sin 2 NA
640 21.76 precipitation 0.1 43200 < th dose independent rect. 20 1
646 21.76 wind 7.0 14400 > th dose independent rect. 20 9
651 21.76 precipitation 0.1 43200 < th dose dependent rect. 20 1
658 21.76 wind 9.0 14400 > th dose dependent rect. 18 5
670 21.77 radiation 10.0 90 > th dose independent no NA NA
679 21.77 wind 7.0 14400 < th dose independent rect. 20 9
681 21.77 radiation 10.0 90 > th dose independent rect. 6 12
684 21.77 wind 9.0 14400 > th dose independent rect. 20 14
805 21.78 radiation 20.0 720 < th dose dependent rect. 5 7
814 21.78 radiation 20.0 90 < th dose dependent rect. 11 23
834 21.79 atmosphere 1015.0 14400 < th dose dependent rect. 10 1
860 21.80 wind 7.0 43200 > th dose independent rect. 20 19
867 21.80 atmosphere 995.0 14400 > th dose dependent rect. 10 1
921 21.82 wind 7.0 43200 < th dose independent rect. 20 19
968 21.83 wind 7.0 43200 > th dose independent rect. 3 12
1000 21.84 wind 1.0 14400 < th dose independent rect. 20 1