Os01g0274100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : FAD dependent oxidoreductase family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0274100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : FAD dependent oxidoreductase family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 324.69 | 0.847 | 7.26 | 1.83 | 2.62 | -1.97 | -4.37 | -1.97 | 0.408 | 11.1 | 17.69 | 655 | -- | -- |
| 326.3 | 0.841 | 7.21 | 2.18 | 2.69 | -2.01 | -4.07 | -- | 0.507 | 11.3 | 18.6 | 559 | -- | -- |
| 382.58 | 0.918 | 7.32 | 0.947 | 3.43 | -1.49 | -- | -5.47 | 0.179 | 11.2 | 19.67 | 60 | -- | -- |
| 395 | 0.926 | 7.21 | 2.01 | 2.85 | -2.05 | -- | -- | 0.513 | 11.5 | 18.8 | 452 | -- | -- |
| 772.91 | 1.29 | 7.24 | 2.17 | -- | -4.15 | -- | -0.996 | 0.621 | -- | 14.75 | 793 | -- | -- |
| 398.34 | 0.936 | 7.27 | 1.66 | 3.04 | -- | -3.94 | -- | 0.16 | 10.7 | -- | -- | -- | -- |
| 462.8 | 1.01 | 7.28 | 1.5 | 3.06 | -- | -- | -- | 0.147 | 10.6 | -- | -- | -- | -- |
| 763.78 | 1.29 | 7.22 | 2.49 | -- | -3.72 | -- | -- | 0.774 | -- | 17.01 | 795 | -- | -- |
| 489.62 | 1.03 | 7.28 | -- | 2.96 | -1.32 | -- | -- | 0.178 | 11.2 | 20.13 | 368 | -- | -- |
| 1039.05 | 1.51 | 7.36 | 1.45 | -- | -- | -- | -- | 0.132 | -- | -- | -- | -- | -- |
| 522.32 | 1.07 | 7.32 | -- | 3.05 | -- | -- | -- | -0.0204 | 10.6 | -- | -- | -- | -- |
| 904.7 | 1.4 | 7.31 | -- | -- | -2.57 | -- | -- | 0.363 | -- | 20.74 | 782 | -- | -- |
| 1094.19 | 1.54 | 7.4 | -- | -- | -- | -- | -- | -0.0284 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 311.88 | temperature | 15 | 30 | > th | dose dependent | rect. | 3 | 17 |
| 26 | 319.98 | temperature | 10 | 270 | > th | dose dependent | rect. | 21 | 22 |
| 43 | 321.44 | temperature | 10 | 30 | > th | dose dependent | rect. | 21 | 23 |
| 50 | 321.66 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 14 |
| 52 | 321.72 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 16 |
| 54 | 322.09 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 55 | 322.16 | temperature | 20 | 720 | > th | dose dependent | sin | 8 | NA |
| 57 | 322.35 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 69 | 323.30 | temperature | 20 | 720 | > th | dose dependent | rect. | 17 | 21 |
| 77 | 323.76 | temperature | 30 | 720 | < th | dose dependent | rect. | 16 | 20 |
| 87 | 324.05 | temperature | 30 | 1440 | < th | dose dependent | rect. | 16 | 5 |
| 99 | 324.34 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 16 |
| 100 | 324.34 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 23 |
| 130 | 324.88 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 22 |
| 145 | 325.18 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 2 |
| 158 | 325.34 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 2 |
| 160 | 325.37 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 4 |
| 180 | 325.60 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 188 | 325.79 | temperature | 15 | 720 | > th | dose dependent | no | NA | NA |
| 227 | 326.27 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 23 |
| 247 | 326.58 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 10 |
| 274 | 326.81 | temperature | 15 | 30 | > th | dose dependent | rect. | 23 | 21 |
| 294 | 327.00 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 9 |
| 332 | 327.38 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 364 | 327.62 | temperature | 30 | 720 | < th | dose dependent | rect. | 20 | 23 |
| 390 | 327.93 | temperature | 30 | 720 | < th | dose dependent | no | NA | NA |
| 402 | 327.99 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 1 |
| 425 | 328.14 | temperature | 20 | 720 | > th | dose dependent | rect. | 1 | 8 |
| 451 | 328.26 | temperature | 30 | 720 | < th | dose dependent | rect. | 5 | 23 |
| 474 | 328.48 | temperature | 20 | 1440 | > th | dose dependent | sin | 15 | NA |
| 529 | 328.86 | temperature | 30 | 720 | < th | dose dependent | rect. | 9 | 23 |
| 540 | 328.89 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 13 |
| 599 | 329.24 | temperature | 30 | 1440 | < th | dose dependent | sin | 17 | NA |
| 963 | 330.99 | temperature | 30 | 720 | < th | dose dependent | sin | 8 | NA |