Os01g0273800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : FAD dependent oxidoreductase family protein.
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Os01g0273800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : FAD dependent oxidoreductase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 308.26 | 0.825 | 9.77 | 2.85 | 0.169 | -0.269 | -2.4 | -6.85 | 0.899 | 12.7 | 24.71 | 1260 | -- | -- |
| 334.97 | 0.852 | 9.65 | 2.66 | 0.239 | 0.32 | -3.04 | -- | 0.962 | 12.9 | 28.05 | 239 | -- | -- |
| 318.25 | 0.831 | 9.79 | 2.77 | 0.272 | -0.222 | -- | -7.9 | 0.879 | 8.88 | 31.18 | 1007 | -- | -- |
| 364.08 | 0.889 | 9.63 | 2.46 | 0.274 | 0.813 | -- | -- | 1.05 | 8.46 | 27.33 | 2346 | -- | -- |
| 322 | 0.836 | 9.8 | 2.73 | -- | -0.00793 | -- | -8.1 | 0.877 | -- | 28.77 | 1006 | -- | -- |
| 337.27 | 0.861 | 9.64 | 2.75 | 0.205 | -- | -2.91 | -- | 1 | 12.6 | -- | -- | -- | -- |
| 369.4 | 0.9 | 9.64 | 2.63 | 0.348 | -- | -- | -- | 0.981 | 9 | -- | -- | -- | -- |
| 367.7 | 0.893 | 9.64 | 2.41 | -- | 1.01 | -- | -- | 1.04 | -- | 32.39 | 2206 | -- | -- |
| 402.76 | 0.935 | 9.79 | -- | 0.398 | 2.68 | -- | -- | 0.307 | 9.21 | 30.43 | 46885 | -- | -- |
| 376.35 | 0.906 | 9.65 | 2.63 | -- | -- | -- | -- | 0.983 | -- | -- | -- | -- | -- |
| 552 | 1.1 | 9.71 | -- | 0.355 | -- | -- | -- | 0.688 | 8.44 | -- | -- | -- | -- |
| 407.53 | 0.94 | 9.79 | -- | -- | 2.68 | -- | -- | 0.307 | -- | 30.64 | 46855 | -- | -- |
| 559.04 | 1.1 | 9.72 | -- | -- | -- | -- | -- | 0.691 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 293.83 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 24 | 3 |
| 3 | 294.10 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 22 | 1 |
| 4 | 294.40 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 15 | 4 |
| 5 | 294.45 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 6 | 294.69 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 1 | 4 |
| 12 | 295.48 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 14 | 295.88 | wind | 7.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 18 | 296.32 | wind | 9.0 | 43200 | > th | dose independent | rect. | 15 | 2 |
| 21 | 296.51 | wind | 7.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 27 | 296.93 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 15 | 6 |
| 28 | 297.00 | wind | 9.0 | 43200 | > th | dose independent | rect. | 15 | 4 |
| 29 | 297.06 | wind | 9.0 | 43200 | < th | dose independent | rect. | 15 | 2 |
| 32 | 297.76 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 34 | 297.87 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 39 | 298.04 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 3 | 5 |
| 60 | 298.79 | atmosphere | 1010.0 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 66 | 299.10 | atmosphere | 1010.0 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 68 | 299.12 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 3 | 5 |
| 82 | 299.54 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 89 | 299.78 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 24 | 6 |
| 93 | 299.82 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 3 | 3 |
| 103 | 300.03 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 4 | 5 |
| 118 | 300.22 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 125 | 300.29 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 2 | 5 |
| 126 | 300.29 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 24 | 6 |
| 152 | 300.59 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 24 | 4 |
| 154 | 300.60 | wind | 1.0 | 14400 | < th | dose independent | rect. | 23 | 4 |
| 162 | 300.76 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 22 | 12 |
| 180 | 300.92 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 2 |
| 195 | 301.09 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 22 | 16 |
| 201 | 301.12 | atmosphere | 1005.0 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 206 | 301.17 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 221 | 301.30 | wind | 1.0 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 236 | 301.39 | wind | 1.0 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 241 | 301.43 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 246 | 301.47 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 3 | 2 |
| 247 | 301.47 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 3 | 2 |
| 258 | 301.53 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 3 | 2 |
| 259 | 301.53 | wind | 1.0 | 43200 | > th | dose independent | rect. | 22 | 5 |
| 266 | 301.56 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 2 | 1 |
| 282 | 301.64 | wind | 1.0 | 14400 | < th | dose independent | rect. | 22 | 6 |
| 288 | 301.69 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 297 | 301.75 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 303 | 301.78 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 24 | 1 |
| 306 | 301.79 | atmosphere | 1010.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 371 | 302.04 | humidity | 60.0 | 43200 | > th | dose dependent | rect. | 5 | 6 |
| 393 | 302.13 | wind | 1.0 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 462 | 302.32 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 15 | 11 |
| 465 | 302.33 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 481 | 302.38 | wind | 1.0 | 14400 | < th | dose dependent | sin | 9 | NA |
| 483 | 302.39 | wind | 1.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 485 | 302.39 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 493 | 302.41 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 3 |
| 494 | 302.42 | radiation | 30.0 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 524 | 302.50 | radiation | 20.0 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 560 | 302.58 | atmosphere | 1005.0 | 14400 | > th | dose dependent | rect. | 3 | 3 |
| 562 | 302.58 | radiation | 20.0 | 43200 | > th | dose dependent | rect. | 16 | 15 |
| 564 | 302.59 | atmosphere | 1005.0 | 14400 | > th | dose dependent | rect. | 3 | 1 |
| 620 | 302.67 | atmosphere | 1005.0 | 14400 | > th | dose dependent | sin | 9 | NA |
| 734 | 302.89 | radiation | 30.0 | 43200 | < th | dose independent | rect. | 15 | 7 |
| 735 | 302.89 | radiation | 30.0 | 43200 | < th | dose independent | rect. | 15 | 10 |
| 740 | 302.89 | atmosphere | 1005.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 746 | 302.90 | radiation | 30.0 | 43200 | < th | dose independent | rect. | 15 | 4 |
| 756 | 302.90 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 15 | 22 |
| 799 | 302.97 | atmosphere | 1010.0 | 14400 | < th | dose independent | rect. | 6 | 17 |
| 805 | 302.98 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 823 | 303.01 | atmosphere | 1010.0 | 14400 | < th | dose independent | sin | 3 | NA |
| 836 | 303.03 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 16 | 16 |
| 877 | 303.09 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 15 | 1 |