Os01g0273000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to 26 proteasome complex subunit DSS1 (Deleted in split hand/split foot protein 1) (Split hand/foot deleted protein 1).
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Os01g0273000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to 26 proteasome complex subunit DSS1 (Deleted in split hand/split foot protein 1) (Split hand/foot deleted protein 1).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 31.05 | 0.262 | 11.8 | -1.36 | 0.143 | -0.227 | 0.234 | 1.22 | -0.525 | 8.68 | 21.6 | 6613 | -- | -- |
| 32.77 | 0.267 | 11.7 | -1.06 | 0.149 | -0.334 | 0.316 | -- | -0.444 | 8.32 | 21.2 | 6516 | -- | -- |
| 31.23 | 0.26 | 11.8 | -1.36 | 0.143 | -0.227 | -- | 1.22 | -0.527 | 8.53 | 21.6 | 6613 | -- | -- |
| 32.25 | 0.264 | 11.7 | -1.11 | 0.127 | -0.479 | -- | -- | -0.439 | 7.89 | 18.3 | 10939 | -- | -- |
| 32.38 | 0.265 | 11.8 | -1.37 | -- | -0.23 | -- | 1.24 | -0.531 | -- | 21.66 | 6613 | -- | -- |
| 35.98 | 0.281 | 11.7 | -0.831 | 0.139 | -- | 0.257 | -- | -0.318 | 8.55 | -- | -- | -- | -- |
| 36.19 | 0.282 | 11.7 | -0.823 | 0.139 | -- | -- | -- | -0.318 | 8.31 | -- | -- | -- | -- |
| 33.02 | 0.268 | 11.7 | -1.22 | -- | -0.589 | -- | -- | -0.455 | -- | 18.01 | 11128 | -- | -- |
| 44.51 | 0.311 | 11.6 | -- | 0.116 | 0.451 | -- | -- | -0.0746 | 8.88 | 21.7 | 47520 | -- | -- |
| 37.26 | 0.285 | 11.7 | -0.822 | -- | -- | -- | -- | -0.317 | -- | -- | -- | -- | -- |
| 54.04 | 0.344 | 11.7 | -- | 0.136 | -- | -- | -- | -0.227 | 8.75 | -- | -- | -- | -- |
| 45.45 | 0.314 | 11.6 | -- | -- | 0.455 | -- | -- | -0.067 | -- | 22.09 | 47520 | -- | -- |
| 55.09 | 0.346 | 11.7 | -- | -- | -- | -- | -- | -0.226 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 30.49 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 2 |
| 2 | 30.59 | temperature | 25 | 1440 | < th | dose independent | rect. | 10 | 1 |
| 4 | 30.62 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 18 |
| 5 | 30.63 | temperature | 20 | 720 | > th | dose dependent | sin | 8 | NA |
| 7 | 30.65 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 16 |
| 9 | 30.69 | temperature | 20 | 720 | > th | dose dependent | sin | 6 | NA |
| 11 | 30.71 | temperature | 20 | 720 | > th | dose dependent | rect. | 19 | 16 |
| 13 | 30.72 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 2 |
| 19 | 30.81 | temperature | 25 | 1440 | > th | dose independent | rect. | 10 | 1 |
| 34 | 30.91 | temperature | 20 | 720 | > th | dose dependent | rect. | 3 | 4 |
| 37 | 30.93 | humidity | 80 | 43200 | > th | dose independent | rect. | 14 | 6 |
| 41 | 30.96 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 10 |
| 42 | 30.97 | humidity | 80 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 44 | 30.98 | humidity | 80 | 43200 | > th | dose independent | rect. | 16 | 2 |
| 48 | 30.99 | temperature | 20 | 720 | > th | dose dependent | rect. | 1 | 8 |
| 50 | 31.00 | humidity | 70 | 43200 | > th | dose dependent | rect. | 15 | 2 |
| 60 | 31.04 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 61 | 31.04 | humidity | 80 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 65 | 31.05 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 4 |
| 74 | 31.07 | wind | 9 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 75 | 31.07 | humidity | 80 | 43200 | > th | dose dependent | rect. | 15 | 5 |
| 77 | 31.08 | humidity | 80 | 43200 | < th | dose independent | rect. | 14 | 6 |
| 86 | 31.10 | temperature | 25 | 4320 | > th | dose independent | rect. | 9 | 6 |
| 98 | 31.12 | temperature | 20 | 1440 | > th | dose dependent | rect. | 12 | 18 |
| 102 | 31.13 | temperature | 20 | 1440 | > th | dose dependent | rect. | 14 | 15 |
| 110 | 31.14 | temperature | 25 | 4320 | < th | dose independent | rect. | 9 | 7 |
| 127 | 31.16 | temperature | 20 | 1440 | > th | dose dependent | sin | 15 | NA |
| 180 | 31.21 | temperature | 25 | 1440 | > th | dose dependent | rect. | 12 | 7 |
| 187 | 31.22 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 189 | 31.22 | temperature | 25 | 1440 | > th | dose dependent | rect. | 12 | 3 |
| 235 | 31.25 | temperature | 25 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 237 | 31.25 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 3 |
| 272 | 31.28 | temperature | 20 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 280 | 31.29 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 325 | 31.32 | temperature | 25 | 4320 | < th | dose independent | rect. | 14 | 1 |
| 349 | 31.33 | humidity | 90 | 43200 | < th | dose independent | rect. | 12 | 4 |
| 364 | 31.34 | temperature | 25 | 4320 | > th | dose independent | rect. | 14 | 1 |
| 387 | 31.35 | humidity | 90 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 394 | 31.35 | humidity | 80 | 43200 | < th | dose independent | rect. | 10 | 10 |
| 398 | 31.35 | temperature | 10 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 436 | 31.36 | temperature | 20 | 4320 | > th | dose dependent | rect. | 7 | 8 |
| 450 | 31.37 | humidity | 90 | 43200 | > th | dose dependent | rect. | 12 | 3 |
| 557 | 31.41 | radiation | 20 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 648 | 31.43 | humidity | 90 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 654 | 31.43 | humidity | 90 | 43200 | > th | dose independent | rect. | 12 | 3 |
| 729 | 31.44 | temperature | 15 | 14400 | > th | dose dependent | sin | 15 | NA |
| 735 | 31.44 | temperature | 30 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 880 | 31.46 | radiation | 20 | 4320 | > th | dose independent | rect. | 16 | 17 |
| 937 | 31.47 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 953 | 31.47 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |