Os01g0272800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os01g0272800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 163.37 | 0.601 | 10.5 | 0.672 | 7.6 | 6.25 | -2.87 | -2.6 | 0.188 | 18.3 | 29.75 | 11 | 24 | -- |
| 168.37 | 0.604 | 10.6 | 0.445 | 7.53 | 6.16 | -1.15 | -- | 0.12 | 18.3 | 29.6 | 12 | 24 | -- |
| 171.61 | 0.61 | 10.6 | 0.451 | 7.5 | 6.2 | -- | -0.0128 | 0.113 | 18.3 | 29.58 | 10 | 0.0272 | -- |
| 171.58 | 0.61 | 10.6 | 0.45 | 7.5 | 6.2 | -- | -- | 0.107 | 18.3 | 29.6 | 10 | 0.00853 | -- |
| 422.17 | 0.957 | 10.5 | 0.558 | -- | 6.5 | -- | -2.69 | -0.372 | -- | 55.89 | 773 | 17 | -- |
| 464.32 | 1.01 | 10.7 | -0.408 | 4.76 | -- | -0.692 | -- | -0.76 | 19.4 | -- | -- | -- | -- |
| 465.61 | 1.01 | 10.7 | -0.393 | 4.75 | -- | -- | -- | -0.762 | 19.4 | -- | -- | -- | -- |
| 398.08 | 0.929 | 10.5 | 0.478 | -- | 6.6 | -- | -- | -0.363 | -- | 62.78 | 826 | 17.4 | -- |
| 176.86 | 0.619 | 10.6 | -- | 7.84 | 6.41 | -- | -- | 0.0187 | 18.2 | 30.57 | 10 | 0.123 | -- |
| 1668.11 | 1.91 | 10.6 | -0.472 | -- | -- | -- | -- | -0.84 | -- | -- | -- | -- | -- |
| 469.68 | 1.01 | 10.7 | -- | 4.76 | -- | -- | -- | -0.718 | 19.4 | -- | -- | -- | -- |
| 351.65 | 0.873 | 10.4 | -- | -- | 6.43 | -- | -- | -0.366 | -- | 134.4 | 1274 | 21.1 | -- |
| 1673.98 | 1.91 | 10.6 | -- | -- | -- | -- | -- | -0.788 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 163.55 | temperature | 30 | 10 | < th | dose dependent | sin | 6 | NA |
| 2 | 164.07 | temperature | 20 | 10 | > th | dose dependent | sin | 7 | NA |
| 22 | 179.21 | temperature | 20 | 270 | > th | dose dependent | rect. | 2 | 8 |
| 39 | 195.21 | temperature | 20 | 270 | > th | dose dependent | rect. | 18 | 16 |
| 75 | 213.89 | temperature | 30 | 90 | < th | dose dependent | rect. | 23 | 16 |
| 77 | 213.94 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 13 |
| 110 | 220.40 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 12 |
| 120 | 221.38 | temperature | 25 | 720 | < th | dose dependent | rect. | 20 | 10 |
| 139 | 224.07 | temperature | 25 | 720 | < th | dose dependent | sin | 11 | NA |
| 194 | 229.50 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 8 |
| 341 | 240.80 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 15 |
| 352 | 241.57 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 9 |
| 421 | 246.01 | temperature | 20 | 270 | > th | dose independent | rect. | 2 | 9 |
| 542 | 252.98 | temperature | 20 | 270 | > th | dose independent | rect. | 17 | 17 |
| 656 | 258.07 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 675 | 259.18 | temperature | 25 | 720 | < th | dose dependent | rect. | 7 | 23 |
| 708 | 260.84 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 18 |
| 709 | 260.87 | temperature | 20 | 270 | > th | dose independent | rect. | 15 | 20 |
| 720 | 261.58 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 16 |
| 733 | 262.14 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 23 |
| 748 | 262.57 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 758 | 262.74 | temperature | 25 | 720 | < th | dose dependent | rect. | 1 | 23 |
| 918 | 269.11 | temperature | 20 | 720 | > th | dose independent | sin | 10 | NA |
| 939 | 269.78 | temperature | 20 | 720 | < th | dose independent | rect. | 19 | 14 |
| 972 | 270.64 | temperature | 20 | 720 | < th | dose independent | sin | 10 | NA |