Os01g0270300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Cationic peroxidase isozyme 40K precursor.
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Os01g0270300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Cationic peroxidase isozyme 40K precursor.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 968.65 | 1.46 | 5.97 | -2 | 3.06 | -2.14 | -0.637 | -1.61 | -1.31 | 11 | 21.06 | 693 | 4.97 | 2.18 |
| 972.76 | 1.45 | 5.95 | -1.67 | 3.04 | -2.12 | -1.26 | -- | -1.25 | 11 | 21.08 | 696 | 5.05 | 1.98 |
| 954.89 | 1.44 | 5.97 | -2.15 | 2.92 | -2.01 | -- | -1.64 | -1.36 | 11.1 | 21.03 | 706 | 5.63 | 1.03 |
| 954.6 | 1.44 | 5.96 | -2 | 2.84 | -1.98 | -- | -- | -1.35 | 10.9 | 20.8 | 729 | 5.58 | 0.483 |
| 1212.6 | 1.62 | 6.06 | -2.14 | -- | -1.75 | -- | -1.64 | -1.36 | -- | 21.05 | 1510 | 5.57 | 1.12 |
| 1165.54 | 1.6 | 6.1 | -2.11 | 1.36 | -- | -1.94 | -- | -1.75 | 10.1 | -- | -- | -- | -- |
| 1180.13 | 1.61 | 6.1 | -2.18 | 1.38 | -- | -- | -- | -1.76 | 9.88 | -- | -- | -- | -- |
| 1175.52 | 1.6 | 6.04 | -2.04 | -- | -1.28 | -- | -- | -1.42 | -- | 20.7 | 1350 | 5.51 | 0.339 |
| 1042.39 | 1.5 | 5.93 | -- | 2.89 | -1.94 | -- | -- | -1.25 | 11.1 | 21 | 732 | 5.61 | 0.455 |
| 1294.17 | 1.68 | 6.14 | -2.2 | -- | -- | -- | -- | -1.76 | -- | -- | -- | -- | -- |
| 1305.94 | 1.69 | 6.04 | -- | 1.39 | -- | -- | -- | -1.51 | 10 | -- | -- | -- | -- |
| 1246.84 | 1.64 | 6.03 | -- | -- | -1.37 | -- | -- | -1.14 | -- | 20.69 | 1345 | 5.75 | 0.0833 |
| 1421.84 | 1.76 | 6.08 | -- | -- | -- | -- | -- | -1.51 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 984.46 | temperature | 20 | 720 | > th | dose independent | rect. | 5 | 2 |
| 5 | 1009.47 | temperature | 20 | 720 | > th | dose dependent | rect. | 5 | 2 |
| 9 | 1011.73 | temperature | 20 | 720 | < th | dose independent | rect. | 2 | 5 |
| 20 | 1016.45 | temperature | 20 | 720 | < th | dose independent | rect. | 5 | 2 |
| 49 | 1025.46 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 8 |
| 54 | 1026.26 | temperature | 20 | 720 | < th | dose independent | rect. | 3 | 1 |
| 62 | 1027.58 | temperature | 30 | 720 | < th | dose dependent | rect. | 2 | 3 |
| 65 | 1028.18 | temperature | 15 | 720 | > th | dose dependent | rect. | 1 | 7 |
| 186 | 1039.03 | temperature | 20 | 720 | > th | dose independent | sin | 5 | NA |
| 212 | 1040.27 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 2 |
| 228 | 1040.93 | temperature | 20 | 720 | < th | dose independent | sin | 5 | NA |
| 232 | 1041.14 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 15 |
| 290 | 1044.91 | temperature | 25 | 720 | < th | dose dependent | sin | 5 | NA |
| 442 | 1054.13 | humidity | 80 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 547 | 1059.93 | humidity | 80 | 14400 | > th | dose independent | rect. | 4 | 3 |
| 550 | 1060.01 | humidity | 80 | 14400 | > th | dose independent | rect. | 23 | 8 |
| 553 | 1060.06 | humidity | 80 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 567 | 1060.66 | humidity | 80 | 14400 | < th | dose dependent | rect. | 22 | 9 |
| 568 | 1060.76 | humidity | 80 | 14400 | < th | dose independent | rect. | 22 | 9 |
| 571 | 1060.91 | temperature | 15 | 720 | > th | dose dependent | sin | 7 | NA |
| 582 | 1061.63 | humidity | 80 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 614 | 1062.96 | humidity | 80 | 14400 | < th | dose dependent | rect. | 22 | 3 |
| 616 | 1063.08 | wind | 1 | 14400 | < th | dose independent | rect. | 1 | 1 |
| 641 | 1063.79 | wind | 1 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 677 | 1064.96 | humidity | 80 | 14400 | > th | dose independent | rect. | 24 | 2 |
| 782 | 1067.67 | humidity | 80 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 794 | 1067.87 | temperature | 25 | 10 | < th | dose independent | rect. | 4 | 12 |
| 795 | 1067.87 | temperature | 25 | 10 | > th | dose independent | rect. | 1 | 17 |
| 815 | 1068.28 | temperature | 25 | 10 | > th | dose independent | rect. | 4 | 14 |
| 949 | 1073.23 | temperature | 25 | 10 | < th | dose independent | sin | 1 | NA |
| 986 | 1074.36 | temperature | 25 | 10 | < th | dose independent | rect. | 2 | 16 |