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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0269800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Disease resistance protein family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.96 (0.0363) R2 : 0.211
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : 7.45 (0.687) R2dE : 0.204 R2E : 0.199
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.181 (0.0764) R2dN8 : 0.0125 R2N8 : 0.00744
σ : 0.682
deviance : 214.35
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_____
C
peak time of C : --
E
wheather : wind
threshold : 0.3403
memory length : 20
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 5.15
open length of G : 0.678

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
212.67 0.685 2.97 -0.0896 0.178 5.14 -0.23 -27.2 0.192 3 0.9904 30 4.99 0.925
213.42 0.68 2.95 0.114 0.189 6.45 -0.0496 -- 0.19 5.48 0.4811 20 4.95 0.717
212.71 0.679 2.97 -0.0874 0.177 5.19 -- -27.6 0.204 3.38 0.9239 30 5 0.933
211.96 0.678 2.95 0.105 0.192 7.38 -- -- 0.188 3.47 0.2672 20 5.07 0.6
214.55 0.682 2.97 -0.071 -- 5.3 -- -26.8 0.192 -- 0.9281 30 5 0.925
265.83 0.764 2.96 0.0708 0.251 -- -0.285 -- 0.161 3.89 -- -- -- --
266.06 0.764 2.96 0.0747 0.251 -- -- -- 0.163 4.09 -- -- -- --
214.02 0.681 2.95 0.113 -- 7.46 -- -- 0.193 -- 0.2925 20 5.1 0.655
212.25 0.679 2.96 -- 0.194 7.37 -- -- 0.176 3.47 0.2716 20 5.09 0.678
269.49 0.767 2.96 0.0849 -- -- -- -- 0.169 -- -- -- -- --
266.21 0.763 2.96 -- 0.253 -- -- -- 0.154 4.08 -- -- -- --
214.35 0.682 2.96 -- -- 7.45 -- -- 0.181 -- 0.3403 20 5.15 0.678
269.68 0.767 2.96 -- -- -- -- -- 0.16 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 214.87 wind 1 30 < th dose dependent rect. 5 1
5 218.28 wind 1 30 < th dose independent rect. 5 1
22 226.73 wind 1 30 < th dose dependent rect. 5 13
57 236.08 wind 1 30 < th dose independent rect. 5 13
64 236.31 wind 1 30 < th dose dependent rect. 5 22
82 241.70 wind 1 30 < th dose dependent rect. 2 7
91 244.19 wind 1 30 < th dose dependent sin 2 NA
94 244.74 wind 1 30 < th dose independent rect. 2 5
112 245.76 wind 1 30 < th dose independent rect. 5 22
119 246.44 wind 1 30 < th dose dependent rect. 2 16
159 248.08 wind 1 30 < th dose independent rect. 2 11
165 248.19 wind 1 30 < th dose independent sin 3 NA
220 249.76 wind 1 30 < th dose independent rect. 2 16
226 249.90 wind 1 30 > th dose independent sin 3 NA
297 252.99 wind 1 270 < th dose dependent rect. 3 3
304 253.42 atmosphere 1005 30 > th dose dependent rect. 24 4
313 253.78 wind 7 10 > th dose independent rect. 21 8
318 253.78 wind 7 10 > th dose dependent rect. 21 8
329 253.90 atmosphere 1005 10 > th dose dependent rect. 2 2
330 253.91 wind 1 270 < th dose dependent rect. 3 1
331 253.94 wind 9 90 > th dose dependent rect. 18 4
351 254.41 atmosphere 1005 90 > th dose independent rect. 2 1
363 254.54 wind 7 30 > th dose independent rect. 21 1
367 254.54 wind 7 30 > th dose dependent rect. 21 1
559 254.87 wind 9 90 > th dose independent rect. 18 4
603 255.18 temperature 25 90 > th dose independent rect. 24 3
609 255.22 wind 1 30 > th dose independent rect. 1 23
634 255.46 humidity 90 90 < th dose independent rect. 2 1
689 255.66 atmosphere 1005 10 > th dose independent rect. 2 2
805 256.14 atmosphere 1005 90 < th dose independent rect. 4 1
838 256.23 humidity 80 90 < th dose dependent rect. 24 3
861 256.38 humidity 80 90 < th dose independent rect. 24 3
879 256.47 temperature 20 30 > th dose dependent rect. 24 4
889 256.52 temperature 25 270 > th dose dependent rect. 23 2
963 256.85 wind 1 43200 > th dose independent rect. 10 2