Os01g0269500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Disease resistance protein family protein.
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Os01g0269500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Disease resistance protein family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 114.82 | 0.503 | 5.87 | 1.64 | 0.775 | -0.478 | 0.784 | -3.92 | 0.0897 | 7.15 | 9.93 | 3963 | -- | -- |
| 124.94 | 0.521 | 5.79 | 1.59 | 0.782 | -0.39 | 0.497 | -- | 0.0745 | 6.87 | 20.01 | 8213 | -- | -- |
| 115.88 | 0.501 | 5.87 | 1.66 | 0.759 | -0.467 | -- | -3.64 | 0.0732 | 7.09 | 9.909 | 4123 | -- | -- |
| 122.36 | 0.515 | 5.79 | 1.55 | 0.754 | -0.408 | -- | -- | 0.0668 | 6.65 | 10.01 | 12756 | -- | -- |
| 143.12 | 0.557 | 5.88 | 1.71 | -- | -0.423 | -- | -3.55 | 0.0689 | -- | 9.591 | 4252 | -- | -- |
| 130.35 | 0.535 | 5.78 | 1.57 | 0.716 | -- | 0.0724 | -- | 0.189 | 6.74 | -- | -- | -- | -- |
| 130.36 | 0.535 | 5.78 | 1.57 | 0.716 | -- | -- | -- | 0.189 | 6.75 | -- | -- | -- | -- |
| 147.85 | 0.566 | 5.83 | 1.41 | -- | -0.462 | -- | -- | 0.0217 | -- | 10 | 12978 | -- | -- |
| 148.29 | 0.567 | 5.76 | -- | 0.559 | -0.704 | -- | -- | 0.164 | 6.96 | 0.02328 | 46086 | -- | -- |
| 157.19 | 0.586 | 5.79 | 1.58 | -- | -- | -- | -- | 0.203 | -- | -- | -- | -- | -- |
| 195.04 | 0.653 | 5.81 | -- | 0.736 | -- | -- | -- | 0.0141 | 6.62 | -- | -- | -- | -- |
| 146.94 | 0.565 | 5.93 | -- | -- | -1.39 | -- | -- | -0.439 | -- | 0.6713 | 47520 | -- | -- |
| 223.27 | 0.697 | 5.83 | -- | -- | -- | -- | -- | 0.027 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 113.02 | radiation | 1 | 1440 | < th | dose dependent | rect. | 3 | 3 |
| 4 | 113.11 | radiation | 1 | 1440 | < th | dose dependent | rect. | 24 | 6 |
| 8 | 113.21 | radiation | 1 | 1440 | < th | dose dependent | rect. | 20 | 10 |
| 12 | 113.51 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 13 | 113.55 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 24 | 113.77 | wind | 1 | 43200 | > th | dose independent | rect. | 21 | 8 |
| 29 | 113.81 | radiation | 10 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 33 | 113.84 | radiation | 1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 36 | 113.88 | wind | 9 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 38 | 113.89 | radiation | 30 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 40 | 113.89 | radiation | 10 | 14400 | < th | dose dependent | rect. | 17 | 13 |
| 43 | 113.91 | wind | 7 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 46 | 113.92 | radiation | 20 | 14400 | < th | dose dependent | rect. | 17 | 8 |
| 47 | 113.92 | radiation | 40 | 14400 | < th | dose dependent | rect. | 17 | 8 |
| 89 | 113.97 | radiation | 10 | 4320 | < th | dose dependent | rect. | 17 | 21 |
| 106 | 114.03 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 108 | 114.06 | humidity | 90 | 43200 | > th | dose independent | rect. | 22 | 2 |
| 109 | 114.06 | radiation | 1 | 14400 | > th | dose dependent | rect. | 17 | 13 |
| 123 | 114.14 | radiation | 10 | 4320 | < th | dose dependent | sin | 12 | NA |
| 153 | 114.24 | humidity | 50 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 155 | 114.25 | humidity | 90 | 43200 | > th | dose independent | rect. | 19 | 5 |
| 162 | 114.27 | radiation | 10 | 4320 | < th | dose dependent | rect. | 16 | 16 |
| 170 | 114.28 | radiation | 30 | 14400 | < th | dose independent | rect. | 15 | 10 |
| 177 | 114.29 | radiation | 1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 181 | 114.29 | radiation | 1 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 184 | 114.30 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 190 | 114.30 | radiation | 1 | 14400 | > th | dose dependent | rect. | 16 | 15 |
| 201 | 114.32 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 23 | 1 |
| 202 | 114.33 | humidity | 90 | 43200 | < th | dose independent | rect. | 17 | 7 |
| 206 | 114.34 | humidity | 90 | 43200 | < th | dose independent | rect. | 19 | 5 |
| 218 | 114.36 | wind | 1 | 43200 | > th | dose independent | sin | 13 | NA |
| 219 | 114.36 | humidity | 90 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 237 | 114.38 | radiation | 1 | 14400 | > th | dose independent | rect. | 17 | 13 |
| 258 | 114.40 | humidity | 90 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 281 | 114.41 | wind | 5 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 292 | 114.41 | radiation | 1 | 14400 | < th | dose dependent | rect. | 24 | 6 |
| 300 | 114.41 | radiation | 1 | 14400 | < th | dose dependent | rect. | 20 | 10 |
| 303 | 114.42 | radiation | 10 | 14400 | < th | dose independent | rect. | 16 | 2 |
| 330 | 114.44 | humidity | 90 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 340 | 114.45 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 345 | 114.45 | radiation | 1 | 14400 | < th | dose independent | rect. | 17 | 13 |
| 364 | 114.46 | radiation | 10 | 14400 | < th | dose independent | rect. | 16 | 9 |
| 382 | 114.47 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 392 | 114.47 | atmosphere | 1005 | 43200 | > th | dose dependent | sin | 13 | NA |
| 395 | 114.47 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 4 | 1 |
| 438 | 114.49 | humidity | 80 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 440 | 114.49 | radiation | 20 | 14400 | > th | dose independent | rect. | 16 | 15 |
| 621 | 114.55 | wind | 5 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 675 | 114.57 | temperature | 25 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 709 | 114.58 | humidity | 90 | 43200 | < th | dose independent | rect. | 9 | 15 |
| 711 | 114.58 | humidity | 90 | 43200 | < th | dose independent | rect. | 7 | 18 |
| 713 | 114.58 | temperature | 10 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 773 | 114.59 | humidity | 90 | 43200 | > th | dose dependent | rect. | 22 | 2 |
| 776 | 114.59 | humidity | 90 | 43200 | > th | dose dependent | rect. | 19 | 6 |
| 807 | 114.60 | humidity | 90 | 43200 | > th | dose independent | rect. | 5 | 19 |
| 881 | 114.62 | radiation | 30 | 14400 | > th | dose independent | rect. | 15 | 17 |
| 887 | 114.62 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 933 | 114.63 | atmosphere | 1005 | 43200 | > th | dose dependent | no | NA | NA |
| 958 | 114.63 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 2 | 22 |
| 967 | 114.64 | radiation | 1 | 14400 | > th | dose independent | sin | 13 | NA |
| 976 | 114.64 | wind | 1 | 43200 | > th | dose independent | rect. | 16 | 13 |
| 979 | 114.64 | radiation | 1 | 14400 | > th | dose independent | rect. | 17 | 18 |
| 981 | 114.64 | temperature | 30 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 995 | 114.64 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 4 | 20 |