Os01g0268100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Major facilitator superfamily antiporter.
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Os01g0268100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Major facilitator superfamily antiporter.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 58.11 | 0.358 | 10.4 | 1.25 | 0.639 | -2.72 | -0.069 | 1.76 | 1.33 | 5.78 | 19.99 | 252 | -- | -- |
| 60.85 | 0.363 | 10.4 | 1.05 | 0.645 | -2.67 | -0.138 | -- | 1.26 | 5.46 | 19.29 | 251 | -- | -- |
| 58.07 | 0.355 | 10.4 | 1.27 | 0.64 | -2.73 | -- | 1.86 | 1.33 | 5.88 | 20.11 | 242 | -- | -- |
| 60.57 | 0.362 | 10.4 | 0.928 | 0.675 | -2.64 | -- | -- | 1.24 | 5.85 | 19.4 | 243 | -- | -- |
| 71.53 | 0.394 | 10.3 | 1.49 | -- | -3.19 | -- | 2.75 | 1.44 | -- | 21.39 | 268 | -- | -- |
| 173.43 | 0.617 | 10.5 | 0.311 | 1.64 | -- | 0.319 | -- | 0.783 | 5.05 | -- | -- | -- | -- |
| 173.69 | 0.617 | 10.5 | 0.311 | 1.64 | -- | -- | -- | 0.782 | 5.05 | -- | -- | -- | -- |
| 76.67 | 0.408 | 10.4 | 1.05 | -- | -3.08 | -- | -- | 1.33 | -- | 20.06 | 272 | -- | -- |
| 80.66 | 0.418 | 10.4 | -- | 0.781 | -2.27 | -- | -- | 1.08 | 5.58 | 20.42 | 242 | -- | -- |
| 314.45 | 0.829 | 10.5 | 0.369 | -- | -- | -- | -- | 0.823 | -- | -- | -- | -- | -- |
| 176.23 | 0.621 | 10.5 | -- | 1.64 | -- | -- | -- | 0.747 | 5.05 | -- | -- | -- | -- |
| 101.91 | 0.47 | 10.4 | -- | -- | -2.79 | -- | -- | 1.15 | -- | 21.52 | 264 | -- | -- |
| 318.05 | 0.832 | 10.5 | -- | -- | -- | -- | -- | 0.782 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 54.54 | temperature | 20 | 270 | > th | dose dependent | rect. | 18 | 23 |
| 5 | 56.39 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 18 |
| 8 | 56.72 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 15 | 58.21 | temperature | 20 | 720 | > th | dose dependent | sin | 6 | NA |
| 16 | 58.33 | temperature | 20 | 270 | > th | dose dependent | no | NA | NA |
| 26 | 58.97 | temperature | 20 | 270 | > th | dose dependent | rect. | 1 | 23 |
| 27 | 59.05 | temperature | 20 | 270 | > th | dose dependent | rect. | 5 | 23 |
| 59 | 61.19 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 18 |
| 64 | 61.33 | temperature | 30 | 720 | < th | dose dependent | rect. | 21 | 18 |
| 109 | 62.60 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 120 | 62.87 | temperature | 30 | 720 | < th | dose dependent | sin | 4 | NA |
| 149 | 63.60 | temperature | 15 | 4320 | > th | dose dependent | rect. | 23 | 3 |
| 174 | 64.09 | temperature | 30 | 4320 | < th | dose dependent | rect. | 23 | 3 |
| 178 | 64.13 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 23 |
| 199 | 64.38 | temperature | 30 | 270 | < th | dose dependent | rect. | 13 | 23 |
| 244 | 64.71 | temperature | 15 | 4320 | > th | dose dependent | rect. | 21 | 12 |
| 248 | 64.72 | temperature | 15 | 4320 | > th | dose dependent | rect. | 23 | 10 |
| 292 | 65.00 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 12 |
| 308 | 65.05 | temperature | 30 | 270 | < th | dose dependent | sin | 0 | NA |
| 313 | 65.06 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 9 |
| 325 | 65.09 | temperature | 30 | 1440 | < th | dose dependent | rect. | 24 | 11 |
| 377 | 65.20 | temperature | 20 | 270 | > th | dose dependent | sin | 1 | NA |
| 457 | 65.39 | temperature | 30 | 4320 | < th | dose dependent | sin | 9 | NA |
| 750 | 66.06 | temperature | 10 | 270 | > th | dose dependent | sin | 1 | NA |
| 822 | 66.19 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |